RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 C1GALT1C1LP0DN25 315 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 AHRP35869 848 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 CCL11P51671 97 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 REEP5Q00765 189 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 DLG1Q12959 904 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 NFATC3Q12968 1075 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 CHAF1BQ13112 559 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 PWP1Q13610 501 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 SLBPQ14493 270 aaKnown RBP eCLIP12.72□□□□□ -0.37
CAPN1-215ENST00000528396 ACAP2Q15057 778 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 HIST2H2ACQ16777 129 aaPredicted RBP12.72□□□□□ -0.37
CAPN1-215ENST00000528396 FAM153CQ494X1 144 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 FBXO48Q5FWF7 155 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 XKR6Q5GH73 641 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 MFSD4BQ5TF39 518 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 HIST2H2AA3Q6FI13 130 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 MED25Q71SY5 747 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 COX15Q7KZN9 410 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 ABHD13Q7L211 337 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 ISCA2Q86U28 154 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 APLFQ8IW19 511 aaPredicted RBP12.72□□□□□ -0.37
CAPN1-215ENST00000528396 CENPLQ8N0S6 344 aaPredicted RBP12.72□□□□□ -0.37
CAPN1-215ENST00000528396 TMEM102Q8N9M5 508 aaPredicted RBP12.72□□□□□ -0.37
CAPN1-215ENST00000528396 EIF1ADQ8N9N8 165 aaKnown RBP12.72□□□□□ -0.37
CAPN1-215ENST00000528396 PDPRQ8NCN5 879 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 ZNF740Q8NDX6 193 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 TRPV3Q8NET8 790 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 OR9A4Q8NGU2 314 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 RHEBL1Q8TAI7 183 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 STT3BQ8TCJ2 826 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 ADAMTS17Q8TE56 1095 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 CCT6BQ92526 530 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 CD244Q9BZW8 370 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 SEMA4CQ9C0C4 833 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 SYNPO2LQ9H987 977 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 MKKSQ9NPJ1 570 aaPredicted RBP12.72□□□□□ -0.37
CAPN1-215ENST00000528396 SEMA3GQ9NS98 782 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 C14orf105Q9NVL8 296 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 OPTCQ9UBM4 332 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 ZFP69BQ9UJL9 534 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 MAP4K5Q9Y4K4 846 aa12.72□□□□□ -0.37
CAPN1-215ENST00000528396 MDC1Q14676 2089 aaKnown RBP12.72□□□□□ -0.37
CAPN1-215ENST00000528396 FER1L5A0AVI2 2057 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 FLNBO75369 2602 aaKnown RBP12.71□□□□□ -0.37
CAPN1-215ENST00000528396 COL6A6A6NMZ7 2263 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 HMX2A2RU54 273 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 URADA6NGE7 173 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 ESPNB1AK53 854 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 H0YIG0 161 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 TAPBPO15533 448 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 ZNF500O60304 480 aaPredicted RBP12.71□□□□□ -0.37
CAPN1-215ENST00000528396 CNOT3O75175 753 aaKnown RBP12.71□□□□□ -0.37
CAPN1-215ENST00000528396 DNAJB5O75953 348 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 HEXBP07686 556 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 UMODP07911 640 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 ZGLP1P0C6A0 271 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 IL1RNP18510 177 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 VARSP26640 1264 aaKnown RBP12.71□□□□□ -0.37
CAPN1-215ENST00000528396 GGT5P36269 586 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 SCTRP47872 440 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 FOXL2P58012 376 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 KLC1Q07866 573 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 SLC29A2Q14542 456 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 HERC3Q15034 1050 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 TSNAXIP1Q2TAA8 658 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 LACTB2Q53H82 288 aaPredicted RBP12.71□□□□□ -0.37
CAPN1-215ENST00000528396 PAGE2BQ5JRK9 111 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 IRAK1BP1Q5VVH5 260 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 CPZQ66K79 652 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 ATG9BQ674R7 924 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 TMEM214Q6NUQ4 689 aaKnown RBP12.71□□□□□ -0.37
CAPN1-215ENST00000528396 NIPAL1Q6NVV3 410 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 LRRC70Q7Z2Q7 622 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 KLHDC8AQ8IYD2 350 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 CNPY4Q8N129 248 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 KCT2Q8NC54 265 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 TTLQ8NG68 377 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 DCAKDQ8WVC6 231 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 UBLCP1Q8WVY7 318 aaPredicted RBP12.71□□□□□ -0.37
CAPN1-215ENST00000528396 ESAMQ96AP7 390 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 NACC2Q96BF6 587 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 MTBPQ96DY7 904 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 ABHD17AQ96GS6 310 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 TMEM79Q9BSE2 394 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 SLC25A23Q9BV35 468 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 ZNF71Q9NQZ8 489 aaPredicted RBP12.71□□□□□ -0.37
CAPN1-215ENST00000528396 P4HTMQ9NXG6 502 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 CPSF2Q9P2I0 782 aaKnown RBP12.71□□□□□ -0.37
CAPN1-215ENST00000528396 C3orf18Q9UK00 162 aa12.71□□□□□ -0.37
CAPN1-215ENST00000528396 PTBP2Q9UKA9 531 aaKnown RBP12.71□□□□□ -0.37
CAPN1-215ENST00000528396 IQANK1A0A1B0GTG1 560 aa12.7□□□□□ -0.38
CAPN1-215ENST00000528396 A6NL46 340 aa12.7□□□□□ -0.38
CAPN1-215ENST00000528396 SGK494L7N484 410 aa12.7□□□□□ -0.38
CAPN1-215ENST00000528396 FFAR3O14843 346 aa12.7□□□□□ -0.38
CAPN1-215ENST00000528396 GPR42O15529 346 aa12.7□□□□□ -0.38
CAPN1-215ENST00000528396 SMIM24O75264 130 aa12.7□□□□□ -0.38
CAPN1-215ENST00000528396 KLHL18O94889 574 aa12.7□□□□□ -0.38
CAPN1-215ENST00000528396 NSA2O95478 260 aaKnown RBP12.7□□□□□ -0.38
CAPN1-215ENST00000528396 RBP1P09455 135 aa12.7□□□□□ -0.38
CAPN1-215ENST00000528396 MMP11P24347 488 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms