RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 EZRP15311 586 aaKnown RBP9.97□□□□□ -0.81
CPSF1-203ENST00000527916 CXCR2P25025 360 aa9.97□□□□□ -0.81
CPSF1-203ENST00000527916 OR1D4P47884 311 aa9.97□□□□□ -0.81
CPSF1-203ENST00000527916 RGS4P49798 205 aa9.97□□□□□ -0.81
CPSF1-203ENST00000527916 ARF3P61204 181 aaPredicted RBP9.97□□□□□ -0.81
CPSF1-203ENST00000527916 YBX1P67809 324 aaKnown RBP9.97□□□□□ -0.81
CPSF1-203ENST00000527916 MPP1Q00013 466 aa9.97□□□□□ -0.81
CPSF1-203ENST00000527916 TIAL1Q01085 375 aaKnown RBP eCLIP9.97□□□□□ -0.81
CPSF1-203ENST00000527916 KLC1Q07866 573 aa9.97□□□□□ -0.81
CPSF1-203ENST00000527916 DHX9Q08211 1270 aaKnown RBP9.97□□□□□ -0.81
CPSF1-203ENST00000527916 CBLBQ13191 982 aa9.97□□□□□ -0.81
CPSF1-203ENST00000527916 CUL1Q13616 776 aa9.97□□□□□ -0.81
CPSF1-203ENST00000527916 CRYMQ14894 314 aa9.97□□□□□ -0.81
CPSF1-203ENST00000527916 MORF4L2Q15014 288 aa9.97□□□□□ -0.81
CPSF1-203ENST00000527916 CDSNQ15517 529 aa9.97□□□□□ -0.81
CPSF1-203ENST00000527916 ABHD17BQ5VST6 288 aa9.97□□□□□ -0.81
CPSF1-203ENST00000527916 ATG9BQ674R7 924 aa9.97□□□□□ -0.81
CPSF1-203ENST00000527916 CREG2Q8IUH2 290 aa9.97□□□□□ -0.81
CPSF1-203ENST00000527916 SPPL2CQ8IUH8 684 aa9.97□□□□□ -0.81
CPSF1-203ENST00000527916 LRRC56Q8IYG6 542 aaPredicted RBP9.97□□□□□ -0.81
CPSF1-203ENST00000527916 MCOLN3Q8TDD5 553 aa9.97□□□□□ -0.81
CPSF1-203ENST00000527916 THAP3Q8WTV1 239 aaPredicted RBP9.97□□□□□ -0.81
CPSF1-203ENST00000527916 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.97□□□□□ -0.81
CPSF1-203ENST00000527916 MIEF2Q96C03 454 aa9.97□□□□□ -0.81
CPSF1-203ENST00000527916 LRRC39Q96DD0 335 aa9.97□□□□□ -0.81
CPSF1-203ENST00000527916 CCDC138Q96M89 665 aa9.97□□□□□ -0.81
CPSF1-203ENST00000527916 OR2A5Q96R48 311 aa9.97□□□□□ -0.81
CPSF1-203ENST00000527916 ACAT2Q9BWD1 397 aa9.97□□□□□ -0.81
CPSF1-203ENST00000527916 RNF14Q9UBS8 474 aa9.97□□□□□ -0.81
CPSF1-203ENST00000527916 ZNF282Q9UDV7 671 aaPredicted RBP9.97□□□□□ -0.81
CPSF1-203ENST00000527916 TEKT2Q9UIF3 430 aa9.97□□□□□ -0.81
CPSF1-203ENST00000527916 TSR3Q9UJK0 312 aaKnown RBP9.97□□□□□ -0.81
CPSF1-203ENST00000527916 C3orf18Q9UK00 162 aa9.97□□□□□ -0.81
CPSF1-203ENST00000527916 CORO1CQ9ULV4 474 aaPredicted RBP9.97□□□□□ -0.81
CPSF1-203ENST00000527916 PCDHGB6Q9Y5F9 930 aa9.97□□□□□ -0.81
CPSF1-203ENST00000527916 KCNE1BA0A087WTH5 132 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 OR5H15A6NDH6 313 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 CCDC188H7C350 402 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 PRPF4O43172 522 aaKnown RBP eCLIP9.96□□□□□ -0.82
CPSF1-203ENST00000527916 NRP2O60462 931 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 MED26O95402 600 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 AHSGP02765 367 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 C8GP07360 202 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 ZGLP1P0C6A0 271 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 ERVK-10P10266 1014 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 ICAM2P13598 275 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 GABRB3P28472 473 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 IMPA1P29218 277 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 SRSF11Q05519 484 aaKnown RBP9.96□□□□□ -0.82
CPSF1-203ENST00000527916 FAM53BQ14153 422 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 FRG1Q14331 258 aaKnown RBP9.96□□□□□ -0.82
CPSF1-203ENST00000527916 MSS51Q4VC12 460 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 TEDDM1Q5T9Z0 273 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 HIBCHQ6NVY1 386 aaPredicted RBP9.96□□□□□ -0.82
CPSF1-203ENST00000527916 Q6ZPB1 254 aaPredicted RBP9.96□□□□□ -0.82
CPSF1-203ENST00000527916 UBE2R2Q712K3 238 aaPredicted RBP9.96□□□□□ -0.82
CPSF1-203ENST00000527916 TGIF2LYQ8IUE0 185 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 CPNE9Q8IYJ1 553 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 PDIK1LQ8N165 341 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 ARHGEF39Q8N4T4 335 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 ACBD4Q8NC06 268 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 STT3BQ8TCJ2 826 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 EEF1AKMT1Q8WVE0 214 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 RERGQ96A58 199 aaPredicted RBP9.96□□□□□ -0.82
CPSF1-203ENST00000527916 C8orf44Q96CB5 159 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 CERS2Q96G23 380 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 C10orf90Q96M02 699 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 TREX2Q9BQ50 279 aaPredicted RBP9.96□□□□□ -0.82
CPSF1-203ENST00000527916 TGIF2Q9GZN2 237 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 PCBD2Q9H0N5 130 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 PARVBQ9HBI1 364 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 TMEM184CQ9NVA4 438 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 RIC8BQ9NVN3 520 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 COQ3Q9NZJ6 369 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 TAC3Q9UHF0 121 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 TRMT6Q9UJA5 497 aaKnown RBP9.96□□□□□ -0.82
CPSF1-203ENST00000527916 ZNF835Q9Y2P0 537 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 SAR1BQ9Y6B6 198 aa9.96□□□□□ -0.82
CPSF1-203ENST00000527916 A0A1W2PQ72 361 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 FAM227AF5H4B4 570 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 TTI1O43156 1089 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 SYF2O95926 243 aaKnown RBP9.95□□□□□ -0.82
CPSF1-203ENST00000527916 EIF2S1P05198 315 aaKnown RBP9.95□□□□□ -0.82
CPSF1-203ENST00000527916 F7P08709 466 aaPredicted RBP9.95□□□□□ -0.82
CPSF1-203ENST00000527916 COX6A1P12074 109 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 ABOP16442 354 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 CCND1P24385 295 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 SLC26A3P40879 764 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 GNG11P61952 73 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 DR1Q01658 176 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 SP140Q13342 867 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 DSG2Q14126 1118 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 ZNF766Q5HY98 468 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 STEAP4Q687X5 459 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 PAQR3Q6TCH7 311 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 PIWIL4Q7Z3Z4 852 aaKnown RBP9.95□□□□□ -0.82
CPSF1-203ENST00000527916 TMEM200AQ86VY9 491 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 IGDCC3Q8IVU1 814 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 PALM2Q8IXS6 379 aa9.95□□□□□ -0.82
CPSF1-203ENST00000527916 PRSS58Q8IYP2 241 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms