RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 ICE2Q659A1 982 aa18.04■□□□□ 0.48
SMPD1-203ENST00000527275 ZFAND4Q86XD8 727 aa18.04■□□□□ 0.48
SMPD1-203ENST00000527275 RBM12BQ8IXT5 1001 aaKnown RBP18.04■□□□□ 0.48
SMPD1-203ENST00000527275 SLC35F3Q8IY50 421 aa18.04■□□□□ 0.48
SMPD1-203ENST00000527275 ARL10Q8N8L6 244 aa18.04■□□□□ 0.48
SMPD1-203ENST00000527275 OR2A1Q8NGT9 310 aa18.04■□□□□ 0.48
SMPD1-203ENST00000527275 ASB9Q96DX5 294 aa18.04■□□□□ 0.48
SMPD1-203ENST00000527275 NLGN3Q9NZ94 848 aa18.04■□□□□ 0.48
SMPD1-203ENST00000527275 SUCOQ9UBS9 1254 aaKnown RBP18.04■□□□□ 0.48
SMPD1-203ENST00000527275 LEF1Q9UJU2 399 aaPredicted RBP18.04■□□□□ 0.48
SMPD1-203ENST00000527275 OTOGLQ3ZCN5 2332 aa18.03■□□□□ 0.48
SMPD1-203ENST00000527275 ASXL3Q9C0F0 2248 aa18.03■□□□□ 0.48
SMPD1-203ENST00000527275 ASPDHA6ND91 283 aa18.03■□□□□ 0.48
SMPD1-203ENST00000527275 ANKRD28O15084 1053 aa18.03■□□□□ 0.48
SMPD1-203ENST00000527275 UGDHO60701 494 aa18.03■□□□□ 0.48
SMPD1-203ENST00000527275 RETP07949 1114 aa18.03■□□□□ 0.48
SMPD1-203ENST00000527275 MYF5P13349 255 aa18.03■□□□□ 0.48
SMPD1-203ENST00000527275 TLR1Q15399 786 aa18.03■□□□□ 0.48
SMPD1-203ENST00000527275 PAGE3Q5JUK9 113 aa18.03■□□□□ 0.48
SMPD1-203ENST00000527275 ADGRF3Q8IZF5 1079 aa18.03■□□□□ 0.48
SMPD1-203ENST00000527275 AVL9Q8NBF6 648 aa18.03■□□□□ 0.48
SMPD1-203ENST00000527275 BHLHE22Q8NFJ8 381 aaPredicted RBP18.03■□□□□ 0.48
SMPD1-203ENST00000527275 SETD7Q8WTS6 366 aaKnown RBP18.03■□□□□ 0.48
SMPD1-203ENST00000527275 LRRC42Q9Y546 428 aa18.03■□□□□ 0.48
SMPD1-203ENST00000527275 DYTNA2CJ06 578 aa18.03■□□□□ 0.48
SMPD1-203ENST00000527275 FXYD1O00168 92 aa18.03■□□□□ 0.48
SMPD1-203ENST00000527275 CLGNO14967 610 aa18.03■□□□□ 0.48
SMPD1-203ENST00000527275 MAP3K7O43318 606 aa18.03■□□□□ 0.48
SMPD1-203ENST00000527275 SNRNP200O75643 2136 aaKnown RBP18.03■□□□□ 0.48
SMPD1-203ENST00000527275 CHRM5P08912 532 aaPredicted RBP18.03■□□□□ 0.48
SMPD1-203ENST00000527275 PEBP1P30086 187 aaKnown RBP18.03■□□□□ 0.48
SMPD1-203ENST00000527275 ATXN3P54252 364 aaPredicted RBP18.03■□□□□ 0.48
SMPD1-203ENST00000527275 NFYCQ13952 458 aa18.03■□□□□ 0.48
SMPD1-203ENST00000527275 TIGD2Q4W5G0 525 aa18.03■□□□□ 0.48
SMPD1-203ENST00000527275 XKR6Q5GH73 641 aa18.03■□□□□ 0.48
SMPD1-203ENST00000527275 CATSPEREQ5SY80 951 aa18.03■□□□□ 0.48
SMPD1-203ENST00000527275 CACHD1Q5VU97 1274 aa18.03■□□□□ 0.48
SMPD1-203ENST00000527275 FRG2Q64ET8 278 aa18.03■□□□□ 0.48
SMPD1-203ENST00000527275 LCTLQ6UWM7 567 aa18.03■□□□□ 0.48
SMPD1-203ENST00000527275 OR10G6Q8NH81 332 aa18.03■□□□□ 0.48
SMPD1-203ENST00000527275 FRG2BQ96QU4 278 aa18.03■□□□□ 0.48
SMPD1-203ENST00000527275 DUSP23Q9BVJ7 150 aa18.03■□□□□ 0.48
SMPD1-203ENST00000527275 EP300Q09472 2414 aaPredicted RBP18.02■□□□□ 0.48
SMPD1-203ENST00000527275 OR6C74A6NCV1 312 aa18.02■□□□□ 0.48
SMPD1-203ENST00000527275 PRICKLE3O43900 615 aaPredicted RBP18.02■□□□□ 0.48
SMPD1-203ENST00000527275 RSL1D1O76021 490 aaKnown RBP18.02■□□□□ 0.48
SMPD1-203ENST00000527275 JAK1P23458 1154 aa18.02■□□□□ 0.48
SMPD1-203ENST00000527275 FOXM1Q08050 763 aa18.02■□□□□ 0.48
SMPD1-203ENST00000527275 CAPRIN1Q14444 709 aaKnown RBP18.02■□□□□ 0.48
SMPD1-203ENST00000527275 KIAA0040Q15053 153 aa18.02■□□□□ 0.48
SMPD1-203ENST00000527275 ZCCHC8Q6NZY4 707 aaKnown RBP18.02■□□□□ 0.48
SMPD1-203ENST00000527275 TMPRSS11BQ86T26 416 aa18.02■□□□□ 0.48
SMPD1-203ENST00000527275 FAM20CQ8IXL6 584 aa18.02■□□□□ 0.48
SMPD1-203ENST00000527275 LIX1Q8N485 282 aa18.02■□□□□ 0.48
SMPD1-203ENST00000527275 OR4C6Q8NH72 309 aa18.02■□□□□ 0.48
SMPD1-203ENST00000527275 ANKRD27Q96NW4 1050 aa18.02■□□□□ 0.48
SMPD1-203ENST00000527275 PCBD2Q9H0N5 130 aa18.02■□□□□ 0.48
SMPD1-203ENST00000527275 PCDHAC1Q9H158 963 aa18.02■□□□□ 0.48
SMPD1-203ENST00000527275 ASIC5Q9NY37 505 aa18.02■□□□□ 0.48
SMPD1-203ENST00000527275 GPRC5BQ9NZH0 403 aa18.02■□□□□ 0.48
SMPD1-203ENST00000527275 SLC6A2P23975 617 aa18.01■□□□□ 0.47
SMPD1-203ENST00000527275 DOC2AQ14183 400 aa18.01■□□□□ 0.47
SMPD1-203ENST00000527275 PTGR1Q14914 329 aa18.01■□□□□ 0.47
SMPD1-203ENST00000527275 SWT1Q5T5J6 900 aaKnown RBP18.01■□□□□ 0.47
SMPD1-203ENST00000527275 RNF111Q6ZNA4 994 aa18.01■□□□□ 0.47
SMPD1-203ENST00000527275 SLCO4C1Q6ZQN7 724 aa18.01■□□□□ 0.47
SMPD1-203ENST00000527275 SLC15A3Q8IY34 581 aa18.01■□□□□ 0.47
SMPD1-203ENST00000527275 SLC5A11Q8WWX8 675 aa18.01■□□□□ 0.47
SMPD1-203ENST00000527275 ATOH1Q92858 354 aaPredicted RBP18.01■□□□□ 0.47
SMPD1-203ENST00000527275 SLC38A3Q99624 504 aa18.01■□□□□ 0.47
SMPD1-203ENST00000527275 HAUS8Q9BT25 410 aa18.01■□□□□ 0.47
SMPD1-203ENST00000527275 LRIT1Q9P2V4 623 aa18.01■□□□□ 0.47
SMPD1-203ENST00000527275 ABCD2Q9UBJ2 740 aa18.01■□□□□ 0.47
SMPD1-203ENST00000527275 DYRK1BQ9Y463 629 aa18.01■□□□□ 0.47
SMPD1-203ENST00000527275 PCDHB11Q9Y5F2 797 aa18.01■□□□□ 0.47
SMPD1-203ENST00000527275 RNF215Q9Y6U7 377 aa18.01■□□□□ 0.47
SMPD1-203ENST00000527275 HEATR5BQ9P2D3 2071 aa18.01■□□□□ 0.47
SMPD1-203ENST00000527275 SERTM1A2A2V5 107 aa18.01■□□□□ 0.47
SMPD1-203ENST00000527275 PIPSLA2A3N6 862 aa18.01■□□□□ 0.47
SMPD1-203ENST00000527275 ISM1B1AKI9 464 aa18.01■□□□□ 0.47
SMPD1-203ENST00000527275 H3BNX3 289 aa18.01■□□□□ 0.47
SMPD1-203ENST00000527275 NVLO15381 856 aaKnown RBP18.01■□□□□ 0.47
SMPD1-203ENST00000527275 PCDHGA12O60330 932 aa18.01■□□□□ 0.47
SMPD1-203ENST00000527275 TYRP1P17643 537 aa18.01■□□□□ 0.47
SMPD1-203ENST00000527275 POLR2CP19387 275 aaPredicted RBP18.01■□□□□ 0.47
SMPD1-203ENST00000527275 CD22P20273 847 aa18.01■□□□□ 0.47
SMPD1-203ENST00000527275 VARSP26640 1264 aaKnown RBP18.01■□□□□ 0.47
SMPD1-203ENST00000527275 CASP2P42575 452 aa18.01■□□□□ 0.47
SMPD1-203ENST00000527275 PRDX1Q06830 199 aaKnown RBP18.01■□□□□ 0.47
SMPD1-203ENST00000527275 TRAP1Q12931 704 aaKnown RBP18.01■□□□□ 0.47
SMPD1-203ENST00000527275 SF1Q15637 639 aaKnown RBP18.01■□□□□ 0.47
SMPD1-203ENST00000527275 C17orf64Q86WR6 236 aa18.01■□□□□ 0.47
SMPD1-203ENST00000527275 ZBTB18Q99592 522 aa18.01■□□□□ 0.47
SMPD1-203ENST00000527275 FAM86C1Q9NVL1 165 aa18.01■□□□□ 0.47
SMPD1-203ENST00000527275 NMRK1Q9NWW6 199 aa18.01■□□□□ 0.47
SMPD1-203ENST00000527275 HRASLS2Q9NWW9 162 aa18.01■□□□□ 0.47
SMPD1-203ENST00000527275 RP1P56715 2156 aa18■□□□□ 0.47
SMPD1-203ENST00000527275 NME4O00746 187 aa18■□□□□ 0.47
SMPD1-203ENST00000527275 SIGLEC6O43699 453 aa18■□□□□ 0.47
SMPD1-203ENST00000527275 NUDT21O43809 227 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms