RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 ENDOVQ8N8Q3 282 aaKnown RBP16.43■□□□□ 0.22
LMX1B-203ENST00000526117 ANKRD53Q8N9V6 530 aa16.43■□□□□ 0.22
LMX1B-203ENST00000526117 ZNF740Q8NDX6 193 aa16.43■□□□□ 0.22
LMX1B-203ENST00000526117 EPS8L3Q8TE67 593 aaKnown RBP16.43■□□□□ 0.22
LMX1B-203ENST00000526117 SLC13A3Q8WWT9 602 aa16.43■□□□□ 0.22
LMX1B-203ENST00000526117 WBP1Q96G27 269 aa16.43■□□□□ 0.22
LMX1B-203ENST00000526117 C1QTNF3Q9BXJ4 246 aa16.43■□□□□ 0.22
LMX1B-203ENST00000526117 GEMIN8Q9NWZ8 242 aaKnown RBP16.43■□□□□ 0.22
LMX1B-203ENST00000526117 IFT80Q9P2H3 777 aaPredicted RBP16.43■□□□□ 0.22
LMX1B-203ENST00000526117 TBK1Q9UHD2 729 aa16.43■□□□□ 0.22
LMX1B-203ENST00000526117 DCDC2Q9UHG0 476 aa16.43■□□□□ 0.22
LMX1B-203ENST00000526117 NXT1Q9UKK6 140 aaKnown RBP16.43■□□□□ 0.22
LMX1B-203ENST00000526117 LHX6Q9UPM6 363 aa16.43■□□□□ 0.22
LMX1B-203ENST00000526117 ATMQ13315 3056 aa16.43■□□□□ 0.22
LMX1B-203ENST00000526117 VSTM2BA6NLU5 285 aa16.42■□□□□ 0.22
LMX1B-203ENST00000526117 H0YIG0 161 aa16.42■□□□□ 0.22
LMX1B-203ENST00000526117 TK2O00142 265 aa16.42■□□□□ 0.22
LMX1B-203ENST00000526117 E2F3O00716 465 aa16.42■□□□□ 0.22
LMX1B-203ENST00000526117 FOXS1O43638 330 aa16.42■□□□□ 0.22
LMX1B-203ENST00000526117 SMIM24O75264 130 aa16.42■□□□□ 0.22
LMX1B-203ENST00000526117 KATNA1O75449 491 aa16.42■□□□□ 0.22
LMX1B-203ENST00000526117 NSA2O95478 260 aaKnown RBP16.42■□□□□ 0.22
LMX1B-203ENST00000526117 SBK3P0C264 359 aa16.42■□□□□ 0.22
LMX1B-203ENST00000526117 PYGBP11216 843 aa16.42■□□□□ 0.22
LMX1B-203ENST00000526117 MEF2AQ02078 507 aaPredicted RBP16.42■□□□□ 0.22
LMX1B-203ENST00000526117 PAGE2BQ5JRK9 111 aa16.42■□□□□ 0.22
LMX1B-203ENST00000526117 TMIGD1Q6UXZ0 262 aa16.42■□□□□ 0.22
LMX1B-203ENST00000526117 AFAP1L2Q8N4X5 818 aa16.42■□□□□ 0.22
LMX1B-203ENST00000526117 OR2Y1Q8NGV0 311 aa16.42■□□□□ 0.22
LMX1B-203ENST00000526117 ADAMTS17Q8TE56 1095 aa16.42■□□□□ 0.22
LMX1B-203ENST00000526117 ESAMQ96AP7 390 aa16.42■□□□□ 0.22
LMX1B-203ENST00000526117 RNF31Q96EP0 1072 aa16.42■□□□□ 0.22
LMX1B-203ENST00000526117 SLC6A16Q9GZN6 736 aa16.42■□□□□ 0.22
LMX1B-203ENST00000526117 ZNF304Q9HCX3 659 aa16.42■□□□□ 0.22
LMX1B-203ENST00000526117 MKS1Q9NXB0 559 aa16.42■□□□□ 0.22
LMX1B-203ENST00000526117 NDOR1Q9UHB4 597 aa16.42■□□□□ 0.22
LMX1B-203ENST00000526117 GPN3Q9UHW5 284 aaPredicted RBP16.42■□□□□ 0.22
LMX1B-203ENST00000526117 RALYQ9UKM9 306 aaKnown RBP16.42■□□□□ 0.22
LMX1B-203ENST00000526117 TSC22D4Q9Y3Q8 395 aa16.42■□□□□ 0.22
LMX1B-203ENST00000526117 MRPS18BQ9Y676 258 aaKnown RBP16.42■□□□□ 0.22
LMX1B-203ENST00000526117 URADA6NGE7 173 aa16.41■□□□□ 0.22
LMX1B-203ENST00000526117 ERVH48-1M5A8F1 160 aa16.41■□□□□ 0.22
LMX1B-203ENST00000526117 PRAMEF4O60810 478 aa16.41■□□□□ 0.22
LMX1B-203ENST00000526117 GLRA3O75311 464 aa16.41■□□□□ 0.22
LMX1B-203ENST00000526117 SERPINA6P08185 405 aa16.41■□□□□ 0.22
LMX1B-203ENST00000526117 VARSP26640 1264 aaKnown RBP16.41■□□□□ 0.22
LMX1B-203ENST00000526117 SERPINB1P30740 379 aa16.41■□□□□ 0.22
LMX1B-203ENST00000526117 HPDP32754 393 aaPredicted RBP16.41■□□□□ 0.22
LMX1B-203ENST00000526117 SLCO1A2P46721 670 aa16.41■□□□□ 0.22
LMX1B-203ENST00000526117 SLC18A2Q05940 514 aa16.41■□□□□ 0.22
LMX1B-203ENST00000526117 RGS1Q08116 209 aa16.41■□□□□ 0.22
LMX1B-203ENST00000526117 DOC2AQ14183 400 aa16.41■□□□□ 0.22
LMX1B-203ENST00000526117 SLBPQ14493 270 aaKnown RBP eCLIP16.41■□□□□ 0.22
LMX1B-203ENST00000526117 HERC3Q15034 1050 aa16.41■□□□□ 0.22
LMX1B-203ENST00000526117 PRAMEF9Q5VWM5 478 aa16.41■□□□□ 0.22
LMX1B-203ENST00000526117 LIPJQ5W064 366 aa16.41■□□□□ 0.22
LMX1B-203ENST00000526117 CYP4X1Q8N118 509 aa16.41■□□□□ 0.22
LMX1B-203ENST00000526117 SNX31Q8N9S9 440 aa16.41■□□□□ 0.22
LMX1B-203ENST00000526117 LSM14AQ8ND56 463 aaKnown RBP16.41■□□□□ 0.22
LMX1B-203ENST00000526117 CREB3L4Q8TEY5 395 aa16.41■□□□□ 0.22
LMX1B-203ENST00000526117 THAP4Q8WY91 577 aa16.41■□□□□ 0.22
LMX1B-203ENST00000526117 UBE2E3Q969T4 207 aa16.41■□□□□ 0.22
LMX1B-203ENST00000526117 SCYL1Q96KG9 808 aa16.41■□□□□ 0.22
LMX1B-203ENST00000526117 IP6K3Q96PC2 410 aa16.41■□□□□ 0.22
LMX1B-203ENST00000526117 RUFY1Q96T51 708 aa16.41■□□□□ 0.22
LMX1B-203ENST00000526117 TGIF2Q9GZN2 237 aa16.41■□□□□ 0.22
LMX1B-203ENST00000526117 RHBGQ9H310 441 aa16.41■□□□□ 0.22
LMX1B-203ENST00000526117 CLK4Q9HAZ1 481 aaKnown RBP16.41■□□□□ 0.22
LMX1B-203ENST00000526117 TMEM216Q9P0N5 145 aa16.41■□□□□ 0.22
LMX1B-203ENST00000526117 CPSF2Q9P2I0 782 aaKnown RBP16.41■□□□□ 0.22
LMX1B-203ENST00000526117 A0A1W2PPM1 405 aa16.4■□□□□ 0.22
LMX1B-203ENST00000526117 NDUFS4O43181 175 aa16.4■□□□□ 0.22
LMX1B-203ENST00000526117 CNOT3O75175 753 aaKnown RBP16.4■□□□□ 0.22
LMX1B-203ENST00000526117 CLEC3AO75596 197 aa16.4■□□□□ 0.22
LMX1B-203ENST00000526117 CYC1P08574 325 aa16.4■□□□□ 0.22
LMX1B-203ENST00000526117 KRT15P19012 456 aa16.4■□□□□ 0.22
LMX1B-203ENST00000526117 CD22P20273 847 aa16.4■□□□□ 0.22
LMX1B-203ENST00000526117 CRHR1P34998 444 aa16.4■□□□□ 0.22
LMX1B-203ENST00000526117 HNF4AP41235 474 aa16.4■□□□□ 0.22
LMX1B-203ENST00000526117 SKP1P63208 163 aa16.4■□□□□ 0.22
LMX1B-203ENST00000526117 IRF8Q02556 426 aa16.4■□□□□ 0.22
LMX1B-203ENST00000526117 IFFO1Q0D2I5 559 aa16.4■□□□□ 0.22
LMX1B-203ENST00000526117 CHIT1Q13231 466 aa16.4■□□□□ 0.22
LMX1B-203ENST00000526117 SSPNQ14714 243 aa16.4■□□□□ 0.22
LMX1B-203ENST00000526117 FBXO48Q5FWF7 155 aa16.4■□□□□ 0.22
LMX1B-203ENST00000526117 XKR6Q5GH73 641 aa16.4■□□□□ 0.22
LMX1B-203ENST00000526117 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.4■□□□□ 0.22
LMX1B-203ENST00000526117 LAS2Q8IYD9 372 aa16.4■□□□□ 0.22
LMX1B-203ENST00000526117 PTGR2Q8N8N7 351 aaPredicted RBP16.4■□□□□ 0.22
LMX1B-203ENST00000526117 AMER3Q8N944 861 aa16.4■□□□□ 0.22
LMX1B-203ENST00000526117 OR2W6PQ8NHA6 318 aa16.4■□□□□ 0.22
LMX1B-203ENST00000526117 TTC9Q92623 222 aa16.4■□□□□ 0.22
LMX1B-203ENST00000526117 SPSB2Q99619 263 aa16.4■□□□□ 0.22
LMX1B-203ENST00000526117 WDR70Q9NW82 654 aa16.4■□□□□ 0.22
LMX1B-203ENST00000526117 ZNF282Q9UDV7 671 aaPredicted RBP16.4■□□□□ 0.22
LMX1B-203ENST00000526117 PCTPQ9UKL6 214 aa16.4■□□□□ 0.22
LMX1B-203ENST00000526117 MAP4K5Q9Y4K4 846 aa16.4■□□□□ 0.22
LMX1B-203ENST00000526117 CCDC151A5D8V7 595 aa16.39■□□□□ 0.21
LMX1B-203ENST00000526117 A8MT66 165 aa16.39■□□□□ 0.21
LMX1B-203ENST00000526117 PCDH17O14917 1159 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms