RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 CASC1Q6TDU7 716 aa3.54□□□□□ -1.84
CD44-219ENST00000525685 MFSD6Q6ZSS7 791 aa3.54□□□□□ -1.84
CD44-219ENST00000525685 FAM43BQ6ZT52 329 aaPredicted RBP3.54□□□□□ -1.84
CD44-219ENST00000525685 ARHGAP22Q7Z5H3 698 aa3.54□□□□□ -1.84
CD44-219ENST00000525685 SMIM29Q86T20 159 aa3.54□□□□□ -1.84
CD44-219ENST00000525685 TRPT1Q86TN4 253 aaKnown RBP3.54□□□□□ -1.84
CD44-219ENST00000525685 TMEM139Q8IV31 216 aa3.54□□□□□ -1.84
CD44-219ENST00000525685 TDRD5Q8NAT2 981 aaKnown RBP3.54□□□□□ -1.84
CD44-219ENST00000525685 GMCL1P1Q8NEA9 526 aa3.54□□□□□ -1.84
CD44-219ENST00000525685 OR13J1Q8NGT2 312 aa3.54□□□□□ -1.84
CD44-219ENST00000525685 CD99L2Q8TCZ2 262 aa3.54□□□□□ -1.84
CD44-219ENST00000525685 IRGQQ8WZA9 623 aa3.54□□□□□ -1.84
CD44-219ENST00000525685 ESR2Q92731 530 aa3.54□□□□□ -1.84
CD44-219ENST00000525685 ZNF558Q96NG5 402 aa3.54□□□□□ -1.84
CD44-219ENST00000525685 PRRG4Q9BZD6 226 aa3.54□□□□□ -1.84
CD44-219ENST00000525685 VN1R1Q9GZP7 353 aa3.54□□□□□ -1.84
CD44-219ENST00000525685 A4GALTQ9NPC4 353 aa3.54□□□□□ -1.84
CD44-219ENST00000525685 SERINC1Q9NRX5 453 aa3.54□□□□□ -1.84
CD44-219ENST00000525685 GKN1Q9NS71 199 aa3.54□□□□□ -1.84
CD44-219ENST00000525685 ADPRHL2Q9NX46 363 aa3.54□□□□□ -1.84
CD44-219ENST00000525685 TBC1D7Q9P0N9 293 aa3.54□□□□□ -1.84
CD44-219ENST00000525685 CLIP2Q9UDT6 1046 aa3.54□□□□□ -1.84
CD44-219ENST00000525685 CTNNA3Q9UI47 895 aa3.54□□□□□ -1.84
CD44-219ENST00000525685 TUBE1Q9UJT0 475 aa3.54□□□□□ -1.84
CD44-219ENST00000525685 STX8Q9UNK0 236 aa3.54□□□□□ -1.84
CD44-219ENST00000525685 C2CD2Q9Y426 696 aa3.54□□□□□ -1.84
CD44-219ENST00000525685 PLXNB2O15031 1838 aa3.54□□□□□ -1.84
CD44-219ENST00000525685 SMCHD1A6NHR9 2005 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 CASP8AP2Q9UKL3 1982 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 E7EWF7 191 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 F5H6K3 240 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 BLOC1S5-TXNDC5H3BN57 136 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 UBE2CO00762 179 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 SOCS5O75159 536 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 FLOT1O75955 427 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 C22orf31O95567 290 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 SP1P08047 785 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 CCDC175P0C221 793 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 PLA2G4BP0C869 781 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 TOP1P11387 765 aaKnown RBP3.53□□□□□ -1.84
CD44-219ENST00000525685 LIFP15018 202 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 ANOS1P23352 680 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 CEACAM8P31997 349 aaPredicted RBP3.53□□□□□ -1.84
CD44-219ENST00000525685 HSPA4P34932 840 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 RPL21P46778 160 aaKnown RBP3.53□□□□□ -1.84
CD44-219ENST00000525685 NT5C2P49902 561 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 MAPK12P53778 367 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 PRKCZQ05513 592 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 RBPJQ06330 500 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 KLRC3Q07444 240 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 NECTIN1Q15223 517 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 ODF4Q2M2E3 257 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 VWC2Q2TAL6 325 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 ZC2HC1CQ53FD0 456 aaPredicted RBP3.53□□□□□ -1.84
CD44-219ENST00000525685 OTUD3Q5T2D3 398 aaPredicted RBP3.53□□□□□ -1.84
CD44-219ENST00000525685 RPUSD3Q6P087 351 aaKnown RBP3.53□□□□□ -1.84
CD44-219ENST00000525685 ADCK2Q7Z695 626 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 CEP57L1Q8IYX8 460 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 NME8Q8N427 588 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 ANKRD13CQ8N6S4 541 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 ZNF611Q8N823 705 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 TRIML1Q8N9V2 468 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 ZNF383Q8NA42 475 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 KLHDC9Q8NEP7 349 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 KBTBD8Q8NFY9 601 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 NCOA7Q8NI08 942 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 HSD17B8Q92506 261 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 SLC47A1Q96FL8 570 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 SIPA1Q96FS4 1042 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 ERO1AQ96HE7 468 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 CFAP57Q96MR6 1250 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 KRT23Q9C075 422 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 GPR88Q9GZN0 384 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 OR10A4Q9H209 315 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 SLC52A3Q9NQ40 469 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 SPHK1Q9NYA1 384 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 NRBP1Q9UHY1 535 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 ZDHHC2Q9UIJ5 367 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 ANAPC5Q9UJX4 755 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 ACAD8Q9UKU7 415 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 KCNJ14Q9UNX9 436 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 RIPK3Q9Y572 518 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 TRIM17Q9Y577 477 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 RPS6KL1Q9Y6S9 549 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 KIF26BQ2KJY2 2108 aa3.53□□□□□ -1.84
CD44-219ENST00000525685 RBBP6Q7Z6E9 1792 aaKnown RBP3.53□□□□□ -1.84
CD44-219ENST00000525685 LRRC37A2A6NM11 1700 aa3.53□□□□□ -1.85
CD44-219ENST00000525685 WDR81Q562E7 1941 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 STK36Q9NRP7 1315 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 RNASEH1O60930 286 aaKnown RBP3.52□□□□□ -1.85
CD44-219ENST00000525685 REC8O95072 547 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 EDN1P05305 212 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 HMBSP08397 361 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 RAB40ALP0C0E4 278 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 OR52Z1P0C646 297 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 DANCRP0C864 163 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 PDHBP11177 359 aa3.52□□□□□ -1.85
CD44-219ENST00000525685 FDPSP14324 419 aaKnown RBP3.52□□□□□ -1.85
CD44-219ENST00000525685 AZGP1P25311 298 aaKnown RBP3.52□□□□□ -1.85
CD44-219ENST00000525685 CDKN1AP38936 164 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms