RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 C1orf74Q96LT6 269 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 NSMCE3Q96MG7 304 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 CSPG4P5Q96PW8 444 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 GFM1Q96RP9 751 aaKnown RBP2.93□□□□□ -1.94
CSDE1-208ENST00000524652 PSMB7Q99436 277 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 DHX35Q9H5Z1 703 aaKnown RBP2.93□□□□□ -1.94
CSDE1-208ENST00000524652 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.93□□□□□ -1.94
CSDE1-208ENST00000524652 SMARCAL1Q9NZC9 954 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 OR12D3Q9UGF7 316 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 LSM7Q9UK45 103 aaKnown RBP2.93□□□□□ -1.94
CSDE1-208ENST00000524652 PHTF1Q9UMS5 762 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 OR51B4Q9Y5P0 310 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 GON4LQ3T8J9 2241 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 SDK1Q7Z5N4 2213 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 PIEZO2Q9H5I5 2752 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 CNOT1A5YKK6 2376 aaKnown RBP2.93□□□□□ -1.94
CSDE1-208ENST00000524652 CELSR3Q9NYQ7 3312 aa2.93□□□□□ -1.94
CSDE1-208ENST00000524652 FBN2P35556 2912 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 LAMA5O15230 3695 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 IGLV5-52A0A0A0MRZ9 124 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 A0A1B0GVM2 712 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 NPIPB13A6NJU9 1138 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 AQP12BA6NM10 295 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 NPIPB5A8MRT5 1133 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 WASH3PC4AMC7 463 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 NPIPB4C9JG80 1138 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 F5H5T6 163 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 J3KR12 359 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 EEF2KO00418 725 aaKnown RBP2.92□□□□□ -1.94
CSDE1-208ENST00000524652 NTN3O00634 580 aaPredicted RBP2.92□□□□□ -1.94
CSDE1-208ENST00000524652 HSPB6O14558 160 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 HNRNPRO43390 633 aaKnown RBP2.92□□□□□ -1.94
CSDE1-208ENST00000524652 PSTPIP1O43586 416 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 BUB3O43684 328 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 SPOPO43791 374 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 KIF1CO43896 1103 aaKnown RBP2.92□□□□□ -1.94
CSDE1-208ENST00000524652 MFSD11O43934 449 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 PRPSAP2O60256 369 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 SNAP91O60641 907 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 ZNF821O75541 412 aaPredicted RBP2.92□□□□□ -1.94
CSDE1-208ENST00000524652 GJB3O75712 270 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 SERPINI2O75830 405 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 ZMPSTE24O75844 475 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 LUC7L3O95232 432 aaKnown RBP2.92□□□□□ -1.94
CSDE1-208ENST00000524652 CLDN7O95471 211 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 DDAH2O95865 285 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 F9P00740 461 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 ITGA2BP08514 1039 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 FCGR2AP12318 317 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 C21orf33P30042 268 aaPredicted RBP2.92□□□□□ -1.94
CSDE1-208ENST00000524652 CHKAP35790 457 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 CSKP41240 450 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 CDKN2BP42772 138 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 SLC1A1P43005 524 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 SSR1P43307 286 aaKnown RBP2.92□□□□□ -1.94
CSDE1-208ENST00000524652 HARS2P49590 506 aaKnown RBP2.92□□□□□ -1.94
CSDE1-208ENST00000524652 STK19P49842 368 aaPredicted RBP2.92□□□□□ -1.94
CSDE1-208ENST00000524652 DNA2P51530 1060 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 NAP1L1P55209 391 aaKnown RBP2.92□□□□□ -1.94
CSDE1-208ENST00000524652 CDH4P55283 916 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 CDH6P55285 790 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 STARD6P59095 220 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 TPI1P60174 286 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 ARF5P84085 180 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 BNC1Q01954 994 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 GBE1Q04446 702 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 ILF3Q12906 894 aaKnown RBP eCLIP2.92□□□□□ -1.94
CSDE1-208ENST00000524652 SPARCL1Q14515 664 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 IHHQ14623 411 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 STARD3Q14849 445 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 PAFAH1B3Q15102 231 aaKnown RBP2.92□□□□□ -1.94
CSDE1-208ENST00000524652 MLF2Q15773 248 aaPredicted RBP2.92□□□□□ -1.94
CSDE1-208ENST00000524652 ITPRIPL2Q3MIP1 535 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 MPPE1Q53F39 396 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 ANKRD20A8PQ5CZ79 823 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 TMEM31Q5JXX7 168 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 LEKR1Q6ZMV7 388 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 Q6ZS52 159 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 TPRG1Q6ZUI0 275 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 CHST9Q7L1S5 443 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 RAB11FIP2Q7L804 512 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 GALNT7Q86SF2 657 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 PATL1Q86TB9 770 aaKnown RBP2.92□□□□□ -1.94
CSDE1-208ENST00000524652 MFN1Q8IWA4 741 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 CCDC105Q8IYK2 499 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 KATNAL2Q8IYT4 538 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 MUC20Q8N307 709 aaPredicted RBP2.92□□□□□ -1.94
CSDE1-208ENST00000524652 CARNMT1Q8N4J0 409 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 RNF10Q8N5U6 811 aaKnown RBP2.92□□□□□ -1.94
CSDE1-208ENST00000524652 RTL3Q8N8U3 475 aaKnown RBP2.92□□□□□ -1.94
CSDE1-208ENST00000524652 NEXN-AS1Q8NBZ9 246 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 HJURPQ8NCD3 748 aaPredicted RBP2.92□□□□□ -1.94
CSDE1-208ENST00000524652 DDI1Q8WTU0 396 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 CPT1BQ92523 772 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 ANP32BQ92688 251 aaKnown RBP2.92□□□□□ -1.94
CSDE1-208ENST00000524652 DNASE1L2Q92874 299 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 ARHGEF2Q92974 986 aaKnown RBP2.92□□□□□ -1.94
CSDE1-208ENST00000524652 HAUS1Q96CS2 278 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 EID2BQ96D98 161 aa2.92□□□□□ -1.94
CSDE1-208ENST00000524652 OTUB2Q96DC9 234 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms