RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 MMP28Q9H239 520 aa4.55□□□□□ -1.68
SKP1-211ENST00000523359 FAM118AQ9NWS6 357 aa4.55□□□□□ -1.68
SKP1-211ENST00000523359 TMOD3Q9NYL9 352 aa4.55□□□□□ -1.68
SKP1-211ENST00000523359 TMOD2Q9NZR1 351 aa4.55□□□□□ -1.68
SKP1-211ENST00000523359 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.55□□□□□ -1.68
SKP1-211ENST00000523359 B3GAT1Q9P2W7 334 aa4.55□□□□□ -1.68
SKP1-211ENST00000523359 ABT1Q9ULW3 272 aaKnown RBP4.55□□□□□ -1.68
SKP1-211ENST00000523359 A0A1W2PPQ1 181 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 FAM172BPA6NC97 362 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 OOEPA6NGQ2 149 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 CASC3O15234 703 aaKnown RBP4.54□□□□□ -1.68
SKP1-211ENST00000523359 POLR2DO15514 142 aaKnown RBP4.54□□□□□ -1.68
SKP1-211ENST00000523359 NUDT21O43809 227 aaKnown RBP4.54□□□□□ -1.68
SKP1-211ENST00000523359 ZNF821O75541 412 aaPredicted RBP4.54□□□□□ -1.68
SKP1-211ENST00000523359 DIRAS3O95661 229 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 PDGFBP01127 241 aaPredicted RBP4.54□□□□□ -1.68
SKP1-211ENST00000523359 FAM86B2P0C5J1 330 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 SMIM18P0DKX4 95 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 FGF5P12034 268 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 KRT5P13647 590 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 ERCC2P18074 760 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 GALP22466 123 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 GLRA2P23416 452 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 MPZP25189 248 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 AZGP1P25311 298 aaKnown RBP4.54□□□□□ -1.68
SKP1-211ENST00000523359 PTPN4P29074 926 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 CCND2P30279 289 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 CLPPQ16740 277 aaPredicted RBP4.54□□□□□ -1.68
SKP1-211ENST00000523359 PHLDA2Q53GA4 152 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 TECRLQ5HYJ1 363 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 CCNYL2Q5T2Q4 361 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 RIPPLY2Q5TAB7 128 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 PLA2G4FQ68DD2 849 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 METAP1DQ6UB28 335 aaPredicted RBP4.54□□□□□ -1.68
SKP1-211ENST00000523359 MFSD7Q6UXD7 560 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 NHLRC1Q6VVB1 395 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 RBM43Q6ZSC3 357 aaKnown RBP4.54□□□□□ -1.68
SKP1-211ENST00000523359 ZNF554Q86TJ5 538 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 HOOK3Q86VS8 718 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 CAMKVQ8NCB2 501 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 KLHDC9Q8NEP7 349 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 ZNF671Q8TAW3 534 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 URGCPQ8TCY9 931 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 LRRC8CQ8TDW0 803 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 IRGQQ8WZA9 623 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 C19orf60Q96EN9 201 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 ZNF558Q96NG5 402 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 GAL3ST1Q99999 423 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 MGME1Q9BQP7 344 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 THAP2Q9H0W7 228 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 BICC1Q9H694 974 aaKnown RBP4.54□□□□□ -1.68
SKP1-211ENST00000523359 COQ10BQ9H8M1 238 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 ZNF334Q9HCZ1 680 aaPredicted RBP4.54□□□□□ -1.68
SKP1-211ENST00000523359 PRMT8Q9NR22 394 aaPredicted RBP4.54□□□□□ -1.68
SKP1-211ENST00000523359 KCNK7Q9Y2U2 307 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 LIPGQ9Y5X9 500 aa4.54□□□□□ -1.68
SKP1-211ENST00000523359 DHX29Q7Z478 1369 aaKnown RBP4.53□□□□□ -1.68
SKP1-211ENST00000523359 PCDH11YQ9BZA8 1340 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 MYH14Q7Z406 1995 aaKnown RBP4.53□□□□□ -1.68
SKP1-211ENST00000523359 NEMP2A6NFY4 417 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 DUXAA6NLW8 204 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 SLC33A1O00400 549 aaPredicted RBP4.53□□□□□ -1.68
SKP1-211ENST00000523359 PTGESO14684 152 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 RASGRF2O14827 1237 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 CYTIPO60759 359 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 ACSL3O95573 720 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 YEATS4O95619 227 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 TSHBP01222 138 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 ETS1P14921 441 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 PAX1P15863 534 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 CDH3P22223 829 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 TCEA1P23193 301 aaKnown RBP4.53□□□□□ -1.68
SKP1-211ENST00000523359 AHCYP23526 432 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 SLC6A6P31641 620 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 CCR1P32246 355 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 RDXP35241 583 aaKnown RBP4.53□□□□□ -1.68
SKP1-211ENST00000523359 TAGLN2P37802 199 aaKnown RBP4.53□□□□□ -1.68
SKP1-211ENST00000523359 WNT5AP41221 380 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 PDX1P52945 283 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 SNU13P55769 128 aaKnown RBP4.53□□□□□ -1.68
SKP1-211ENST00000523359 PHEXP78562 749 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 FUT11Q495W5 492 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 FBXO48Q5FWF7 155 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 WDR38Q5JTN6 314 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 PRR27Q6MZM9 219 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 MFSD12Q6NUT3 480 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 NOTUMQ6P988 496 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 Q6ZTC4 211 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 C1orf186Q6ZWK4 172 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 DET1Q7L5Y6 550 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 TRMT1LQ7Z2T5 733 aaKnown RBP4.53□□□□□ -1.68
SKP1-211ENST00000523359 ARHGAP22Q7Z5H3 698 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 MFN1Q8IWA4 741 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 NPEPL1Q8NDH3 523 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 OR1J1Q8NGS3 322 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 PSMA8Q8TAA3 256 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 OLIG1Q8TAK6 271 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 GANCQ8TET4 914 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 SSMEM1Q8WWF3 244 aa4.53□□□□□ -1.68
SKP1-211ENST00000523359 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.53□□□□□ -1.687e-9■■■■■ 72.6
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms