RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 CNOT4O95628 575 aaKnown RBP12.92□□□□□ -0.34
NKX3-1-202ENST00000523261 TUBB4AP04350 444 aa12.92□□□□□ -0.34
NKX3-1-202ENST00000523261 BCL6P41182 706 aa12.92□□□□□ -0.34
NKX3-1-202ENST00000523261 BDKRB1P46663 353 aa12.92□□□□□ -0.34
NKX3-1-202ENST00000523261 OR4D2P58180 307 aa12.92□□□□□ -0.34
NKX3-1-202ENST00000523261 MPP1Q00013 466 aa12.92□□□□□ -0.34
NKX3-1-202ENST00000523261 HSPB2Q16082 182 aa12.92□□□□□ -0.34
NKX3-1-202ENST00000523261 ZNF425Q6IV72 752 aa12.92□□□□□ -0.34
NKX3-1-202ENST00000523261 TTC23LQ6PF05 361 aa12.92□□□□□ -0.34
NKX3-1-202ENST00000523261 RGS9BPQ6ZS82 235 aa12.92□□□□□ -0.34
NKX3-1-202ENST00000523261 SEM1Q6ZVN7 128 aa12.92□□□□□ -0.34
NKX3-1-202ENST00000523261 NAXEQ8NCW5 288 aa12.92□□□□□ -0.34
NKX3-1-202ENST00000523261 LKAAEAR1Q8TD35 194 aa12.92□□□□□ -0.34
NKX3-1-202ENST00000523261 RNF25Q96BH1 459 aaPredicted RBP12.92□□□□□ -0.34
NKX3-1-202ENST00000523261 MRPS30Q9NP92 439 aaKnown RBP12.92□□□□□ -0.34
NKX3-1-202ENST00000523261 LANCL2Q9NS86 450 aa12.92□□□□□ -0.34
NKX3-1-202ENST00000523261 SCN3AQ9NY46 2000 aa12.92□□□□□ -0.34
NKX3-1-202ENST00000523261 CTTNBP2NLQ9P2B4 639 aa12.92□□□□□ -0.34
NKX3-1-202ENST00000523261 MTRF1LQ9UGC7 380 aaKnown RBP12.92□□□□□ -0.34
NKX3-1-202ENST00000523261 ACAD8Q9UKU7 415 aa12.92□□□□□ -0.34
NKX3-1-202ENST00000523261 DUSP10Q9Y6W6 482 aa12.92□□□□□ -0.34
NKX3-1-202ENST00000523261 A0A087X0T9 212 aa12.91□□□□□ -0.34
NKX3-1-202ENST00000523261 MBD3L4A6NDZ8 208 aaPredicted RBP12.91□□□□□ -0.34
NKX3-1-202ENST00000523261 OR51F1A6NGY5 319 aa12.91□□□□□ -0.34
NKX3-1-202ENST00000523261 MBD3L5A6NJ08 208 aaPredicted RBP12.91□□□□□ -0.34
NKX3-1-202ENST00000523261 AQP7O14520 342 aa12.91□□□□□ -0.34
NKX3-1-202ENST00000523261 DNAJB6O75190 326 aa12.91□□□□□ -0.34
NKX3-1-202ENST00000523261 KRT1P04264 644 aa12.91□□□□□ -0.34
NKX3-1-202ENST00000523261 FAM228BP0C875 321 aa12.91□□□□□ -0.34
NKX3-1-202ENST00000523261 EZRP15311 586 aaKnown RBP12.91□□□□□ -0.34
NKX3-1-202ENST00000523261 FOXN2P32314 431 aa12.91□□□□□ -0.34
NKX3-1-202ENST00000523261 PLGLB1Q02325 96 aa12.91□□□□□ -0.34
NKX3-1-202ENST00000523261 POMZP3Q6PJE2 187 aa12.91□□□□□ -0.34
NKX3-1-202ENST00000523261 KIF18BQ86Y91 864 aa12.91□□□□□ -0.34
NKX3-1-202ENST00000523261 RAB42Q8N4Z0 105 aa12.91□□□□□ -0.34
NKX3-1-202ENST00000523261 OR2M7Q8NG81 312 aa12.91□□□□□ -0.34
NKX3-1-202ENST00000523261 PERPQ96FX8 193 aa12.91□□□□□ -0.34
NKX3-1-202ENST00000523261 QKIQ96PU8 341 aaKnown RBP eCLIP12.91□□□□□ -0.34
NKX3-1-202ENST00000523261 TTTY12Q9BZ98 90 aa12.91□□□□□ -0.34
NKX3-1-202ENST00000523261 ARNT2Q9HBZ2 717 aa12.91□□□□□ -0.34
NKX3-1-202ENST00000523261 TIMMDC1Q9NPL8 285 aa12.91□□□□□ -0.34
NKX3-1-202ENST00000523261 PCYOX1Q9UHG3 505 aa12.91□□□□□ -0.34
NKX3-1-202ENST00000523261 VPS9D1Q9Y2B5 631 aa12.91□□□□□ -0.34
NKX3-1-202ENST00000523261 NFS1Q9Y697 457 aa12.91□□□□□ -0.34
NKX3-1-202ENST00000523261 A0A0G2JMM0 328 aa12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 A0A1W2PPB8 328 aa12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 A0A1W2PRS3 328 aa12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 KIR3DP1A8MWS1 328 aa12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 SGK494L7N484 410 aa12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 CDC123O75794 336 aaPredicted RBP12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 GLSO94925 669 aaPredicted RBP12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 STATHP02808 62 aa12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 APOA4P06727 396 aa12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 PKMP14618 531 aaKnown RBP12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 GABRA1P14867 456 aa12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 IL1RNP18510 177 aa12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 SORDQ00796 357 aa12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 RELAQ04206 551 aa12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 TYSND1Q2T9J0 566 aa12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 WLSQ5T9L3 541 aa12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 HEPHL1Q6MZM0 1159 aa12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 MFSD7Q6UXD7 560 aa12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 SLC22A16Q86VW1 577 aa12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 TMEM156Q8N614 296 aa12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 PSD4Q8NDX1 1056 aa12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 MCOLN3Q8TDD5 553 aa12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 SMPDL3BQ92485 455 aa12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 RBCK1Q9BYM8 510 aa12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 HSD3B7Q9H2F3 369 aa12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 ALKBH4Q9NXW9 302 aa12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 KCMF1Q9P0J7 381 aa12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 UVRAGQ9P2Y5 699 aa12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 ADGRE2Q9UHX3 823 aa12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 TTC7AQ9ULT0 858 aaPredicted RBP12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 RUVBL2Q9Y230 463 aaKnown RBP12.9□□□□□ -0.34
NKX3-1-202ENST00000523261 ABCA1O95477 2261 aa12.9□□□□□ -0.35
NKX3-1-202ENST00000523261 IQCF5A8MTL0 148 aa12.89□□□□□ -0.35
NKX3-1-202ENST00000523261 F8W8V4 182 aa12.89□□□□□ -0.35
NKX3-1-202ENST00000523261 CES2O00748 559 aa12.89□□□□□ -0.35
NKX3-1-202ENST00000523261 SUSD5O60279 629 aa12.89□□□□□ -0.35
NKX3-1-202ENST00000523261 CST8O60676 142 aa12.89□□□□□ -0.35
NKX3-1-202ENST00000523261 MSNP26038 577 aaKnown RBP12.89□□□□□ -0.35
NKX3-1-202ENST00000523261 AOAHP28039 575 aa12.89□□□□□ -0.35
NKX3-1-202ENST00000523261 PSMB4P28070 264 aa12.89□□□□□ -0.35
NKX3-1-202ENST00000523261 MAGEA5P43359 124 aa12.89□□□□□ -0.35
NKX3-1-202ENST00000523261 MAN2A2P49641 1150 aa12.89□□□□□ -0.35
NKX3-1-202ENST00000523261 DMTNQ08495 405 aa12.89□□□□□ -0.35
NKX3-1-202ENST00000523261 ALKBH5Q6P6C2 394 aaKnown RBP12.89□□□□□ -0.35
NKX3-1-202ENST00000523261 SUSD1Q6UWL2 747 aa12.89□□□□□ -0.35
NKX3-1-202ENST00000523261 KIAA0408Q6ZU52 694 aa12.89□□□□□ -0.35
NKX3-1-202ENST00000523261 HIPK1Q86Z02 1210 aa12.89□□□□□ -0.35
NKX3-1-202ENST00000523261 PLD3Q8IV08 490 aa12.89□□□□□ -0.35
NKX3-1-202ENST00000523261 TMEM251Q8N6I4 163 aa12.89□□□□□ -0.35
NKX3-1-202ENST00000523261 NFAM1Q8NET5 270 aaPredicted RBP12.89□□□□□ -0.35
NKX3-1-202ENST00000523261 PPP1R14CQ8TAE6 165 aa12.89□□□□□ -0.35
NKX3-1-202ENST00000523261 STYXQ8WUJ0 223 aa12.89□□□□□ -0.35
NKX3-1-202ENST00000523261 SARAFQ96BY9 339 aa12.89□□□□□ -0.35
NKX3-1-202ENST00000523261 TBL1YQ9BQ87 522 aa12.89□□□□□ -0.35
NKX3-1-202ENST00000523261 CARD6Q9BX69 1037 aa12.89□□□□□ -0.35
NKX3-1-202ENST00000523261 DEFB126Q9BYW3 111 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms