RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 CCL11P51671 97 aa16.95■□□□□ 0.3
CLK4-211ENST00000522556 KLC1Q07866 573 aa16.95■□□□□ 0.3
CLK4-211ENST00000522556 RAPSNQ13702 412 aa16.95■□□□□ 0.3
CLK4-211ENST00000522556 DSG2Q14126 1118 aa16.95■□□□□ 0.3
CLK4-211ENST00000522556 SSPNQ14714 243 aa16.95■□□□□ 0.3
CLK4-211ENST00000522556 GARNL3Q5VVW2 1013 aa16.95■□□□□ 0.3
CLK4-211ENST00000522556 PRMT9Q6P2P2 845 aa16.95■□□□□ 0.3
CLK4-211ENST00000522556 RAB43Q86YS6 212 aa16.95■□□□□ 0.3
CLK4-211ENST00000522556 ZC3H7AQ8IWR0 971 aaKnown RBP16.95■□□□□ 0.3
CLK4-211ENST00000522556 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.95■□□□□ 0.3
CLK4-211ENST00000522556 C9orf43Q8TAL5 461 aaPredicted RBP16.95■□□□□ 0.3
CLK4-211ENST00000522556 SLC13A3Q8WWT9 602 aa16.95■□□□□ 0.3
CLK4-211ENST00000522556 ISL2Q96A47 359 aa16.95■□□□□ 0.3
CLK4-211ENST00000522556 SARGQ9BW04 601 aa16.95■□□□□ 0.3
CLK4-211ENST00000522556 FAM117AQ9C073 453 aa16.95■□□□□ 0.3
CLK4-211ENST00000522556 SLC25A18Q9H1K4 315 aa16.95■□□□□ 0.3
CLK4-211ENST00000522556 ADNPQ9H2P0 1102 aa16.95■□□□□ 0.3
CLK4-211ENST00000522556 ANKZF1Q9H8Y5 726 aa16.95■□□□□ 0.3
CLK4-211ENST00000522556 WDR54Q9H977 334 aa16.95■□□□□ 0.3
CLK4-211ENST00000522556 PELI2Q9HAT8 420 aa16.95■□□□□ 0.3
CLK4-211ENST00000522556 NMRAL1Q9HBL8 299 aa16.95■□□□□ 0.3
CLK4-211ENST00000522556 HCN3Q9P1Z3 774 aa16.95■□□□□ 0.3
CLK4-211ENST00000522556 TRPC4Q9UBN4 977 aa16.95■□□□□ 0.3
CLK4-211ENST00000522556 HS3ST3B1Q9Y662 390 aa16.95■□□□□ 0.3
CLK4-211ENST00000522556 SCN2AQ99250 2005 aa16.95■□□□□ 0.3
CLK4-211ENST00000522556 TLN1Q9Y490 2541 aaKnown RBP16.94■□□□□ 0.3
CLK4-211ENST00000522556 IGLV3-12A0A075B6K2 115 aa16.94■□□□□ 0.3
CLK4-211ENST00000522556 A0A087X1B8 175 aa16.94■□□□□ 0.3
CLK4-211ENST00000522556 EXOC1LA0A1B0GW35 172 aa16.94■□□□□ 0.3
CLK4-211ENST00000522556 TRIM49D1C9J1S8 452 aa16.94■□□□□ 0.3
CLK4-211ENST00000522556 PYCARD-AS1I3L0S3 204 aa16.94■□□□□ 0.3
CLK4-211ENST00000522556 SGK494L7N484 410 aa16.94■□□□□ 0.3
CLK4-211ENST00000522556 SOCS6O14544 535 aa16.94■□□□□ 0.3
CLK4-211ENST00000522556 RDH16O75452 317 aa16.94■□□□□ 0.3
CLK4-211ENST00000522556 ALBP02768 609 aa16.94■□□□□ 0.3
CLK4-211ENST00000522556 SERPIND1P05546 499 aa16.94■□□□□ 0.3
CLK4-211ENST00000522556 ABHD2P08910 425 aa16.94■□□□□ 0.3
CLK4-211ENST00000522556 ZGLP1P0C6A0 271 aa16.94■□□□□ 0.3
CLK4-211ENST00000522556 GGT5P36269 586 aa16.94■□□□□ 0.3
CLK4-211ENST00000522556 SLC26A3P40879 764 aa16.94■□□□□ 0.3
CLK4-211ENST00000522556 HYAL2Q12891 473 aa16.94■□□□□ 0.3
CLK4-211ENST00000522556 CDC16Q13042 620 aa16.94■□□□□ 0.3
CLK4-211ENST00000522556 SLBPQ14493 270 aaKnown RBP eCLIP16.94■□□□□ 0.3
CLK4-211ENST00000522556 SULT1C3Q6IMI6 304 aa16.94■□□□□ 0.3
CLK4-211ENST00000522556 SNX31Q8N9S9 440 aa16.94■□□□□ 0.3
CLK4-211ENST00000522556 THAP11Q96EK4 314 aa16.94■□□□□ 0.3
CLK4-211ENST00000522556 YIPF2Q9BWQ6 316 aa16.94■□□□□ 0.3
CLK4-211ENST00000522556 DNAJC11Q9NVH1 559 aa16.94■□□□□ 0.3
CLK4-211ENST00000522556 P4HTMQ9NXG6 502 aa16.94■□□□□ 0.3
CLK4-211ENST00000522556 NUDT4Q9NZJ9 180 aa16.94■□□□□ 0.3
CLK4-211ENST00000522556 ZNF282Q9UDV7 671 aaPredicted RBP16.94■□□□□ 0.3
CLK4-211ENST00000522556 KCNE2Q9Y6J6 123 aa16.94■□□□□ 0.3
CLK4-211ENST00000522556 OR2W5A6NFC9 320 aa16.93■□□□□ 0.3
CLK4-211ENST00000522556 A6NL46 340 aa16.93■□□□□ 0.3
CLK4-211ENST00000522556 CCNT2O60583 730 aaKnown RBP16.93■□□□□ 0.3
CLK4-211ENST00000522556 KLHL2O95198 593 aa16.93■□□□□ 0.3
CLK4-211ENST00000522556 ZNF888P0CJ79 500 aaPredicted RBP16.93■□□□□ 0.3
CLK4-211ENST00000522556 PIM1P11309 404 aaPredicted RBP16.93■□□□□ 0.3
CLK4-211ENST00000522556 GRK3P35626 688 aa16.93■□□□□ 0.3
CLK4-211ENST00000522556 HNF4AP41235 474 aa16.93■□□□□ 0.3
CLK4-211ENST00000522556 MSH2P43246 934 aa16.93■□□□□ 0.3
CLK4-211ENST00000522556 OLR1P78380 273 aa16.93■□□□□ 0.3
CLK4-211ENST00000522556 RBBP5Q15291 538 aaKnown RBP16.93■□□□□ 0.3
CLK4-211ENST00000522556 TECRLQ5HYJ1 363 aa16.93■□□□□ 0.3
CLK4-211ENST00000522556 FAM219BQ5XKK7 198 aa16.93■□□□□ 0.3
CLK4-211ENST00000522556 KIRREL2Q6UWL6 708 aa16.93■□□□□ 0.3
CLK4-211ENST00000522556 VN1R5Q7Z5H4 357 aa16.93■□□□□ 0.3
CLK4-211ENST00000522556 CAMKVQ8NCB2 501 aa16.93■□□□□ 0.3
CLK4-211ENST00000522556 OR5T3Q8NGG3 340 aa16.93■□□□□ 0.3
CLK4-211ENST00000522556 STAG3L4Q8TBR4 150 aa16.93■□□□□ 0.3
CLK4-211ENST00000522556 MIEF2Q96C03 454 aa16.93■□□□□ 0.3
CLK4-211ENST00000522556 C8orf44Q96CB5 159 aa16.93■□□□□ 0.3
CLK4-211ENST00000522556 MVB12AQ96EY5 273 aa16.93■□□□□ 0.3
CLK4-211ENST00000522556 AIF1LQ9BQI0 150 aa16.93■□□□□ 0.3
CLK4-211ENST00000522556 CRB3Q9BUF7 120 aa16.93■□□□□ 0.3
CLK4-211ENST00000522556 RBCK1Q9BYM8 510 aa16.93■□□□□ 0.3
CLK4-211ENST00000522556 KLHL31Q9H511 634 aa16.93■□□□□ 0.3
CLK4-211ENST00000522556 ACSS2Q9NR19 701 aa16.93■□□□□ 0.3
CLK4-211ENST00000522556 TUBD1Q9UJT1 453 aa16.93■□□□□ 0.3
CLK4-211ENST00000522556 FOXO6A8MYZ6 492 aa16.92■□□□□ 0.3
CLK4-211ENST00000522556 TXNDC9O14530 226 aa16.92■□□□□ 0.3
CLK4-211ENST00000522556 ZNF500O60304 480 aaPredicted RBP16.92■□□□□ 0.3
CLK4-211ENST00000522556 STK16O75716 305 aa16.92■□□□□ 0.3
CLK4-211ENST00000522556 KLHL18O94889 574 aa16.92■□□□□ 0.3
CLK4-211ENST00000522556 TBX6O95947 436 aaPredicted RBP16.92■□□□□ 0.3
CLK4-211ENST00000522556 C1GALT1C1LP0DN25 315 aa16.92■□□□□ 0.3
CLK4-211ENST00000522556 MMP11P24347 488 aa16.92■□□□□ 0.3
CLK4-211ENST00000522556 C19orf57Q0VDD7 668 aa16.92■□□□□ 0.3
CLK4-211ENST00000522556 FAM53BQ14153 422 aa16.92■□□□□ 0.3
CLK4-211ENST00000522556 SLC29A2Q14542 456 aa16.92■□□□□ 0.3
CLK4-211ENST00000522556 PDK4Q16654 411 aa16.92■□□□□ 0.3
CLK4-211ENST00000522556 NDUFA9Q16795 377 aa16.92■□□□□ 0.3
CLK4-211ENST00000522556 DCAF10Q5QP82 559 aa16.92■□□□□ 0.3
CLK4-211ENST00000522556 ATG9BQ674R7 924 aa16.92■□□□□ 0.3
CLK4-211ENST00000522556 FAAH2Q6GMR7 532 aa16.92■□□□□ 0.3
CLK4-211ENST00000522556 TRMT10CQ7L0Y3 403 aaKnown RBP16.92■□□□□ 0.3
CLK4-211ENST00000522556 TCAIMQ8N3R3 496 aa16.92■□□□□ 0.3
CLK4-211ENST00000522556 FDCSPQ8NFU4 85 aa16.92■□□□□ 0.3
CLK4-211ENST00000522556 CREB3L4Q8TEY5 395 aa16.92■□□□□ 0.3
CLK4-211ENST00000522556 UBTD2Q8WUN7 234 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms