RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 CCDC80Q76M96 950 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 C17orf62Q9BQA9 187 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 LGR4Q9BXB1 951 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 BHLHE41Q9C0J9 482 aaPredicted RBP15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 IL21RQ9HBE5 538 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 TAS2R7Q9NYW3 318 aa15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 COL2A1P02458 1487 aaPredicted RBP15.75■□□□□ 0.11
PCDHA3-201ENST00000522353 TRBC2A0A5B9 178 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 H7BY64 318 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 PEX2P28328 305 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 HSD11B1P28845 292 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 XKP51811 444 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 MC1RQ01726 317 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 ZNF763Q0D2J5 394 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 IQCCQ4KMZ1 466 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 TNFAIP8L3Q5GJ75 292 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 RABEPKQ7Z6M1 372 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 PRAP1Q96NZ9 151 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 MGME1Q9BQP7 344 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 DEFB126Q9BYW3 111 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 SEC61A2Q9H9S3 476 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 TAS2R9Q9NYW1 312 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 A6NCN8 305 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 VSX2P58304 361 aaPredicted RBP15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 SCN1BQ07699 218 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 AMIGO1Q86WK6 493 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 NPAS3Q8IXF0 933 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 LRRC58Q96CX6 371 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 PTCHD1Q96NR3 888 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 IFT46Q9NQC8 304 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 WDR45Q9Y484 360 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 CXorf49A8MYA2 514 aaPredicted RBP15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 MPC1LP0DKB6 136 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 VIPR2P41587 438 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 GPR153Q6NV75 609 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 ASPGQ86U10 573 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 TMEM234Q8WY98 164 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 FAM3CQ92520 227 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 KAT8Q9H7Z6 458 aaKnown RBP15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 TAS2R1Q9NYW7 299 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 DLGAP4Q9Y2H0 992 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 KHNYNO15037 678 aaKnown RBP15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 BMP8BP34820 402 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 ALDH3A2P51648 485 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 CREB5Q02930 508 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 FAM189A2Q15884 450 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 KCTD8Q6ZWB6 473 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 BMP8AQ7Z5Y6 402 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 RAB43Q86YS6 212 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 TCEAL8Q8IYN2 117 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 LGI4Q8N135 537 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 ANKFN1Q8N957 763 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 B4GALT7Q9UBV7 327 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 TMEM59LQ9UK28 342 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 KCNJ13O60928 360 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 ASGR2P07307 311 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 CREB1P16220 341 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 KLF1Q13351 362 aaPredicted RBP15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 PRPF38BQ5VTL8 546 aaKnown RBP15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 PAMR1Q6UXH9 720 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 MRPL10Q7Z7H8 261 aaKnown RBP15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 AKAP14Q86UN6 197 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 NRROSQ86YC3 692 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 PHOSPHO2Q8TCD6 241 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 IGSF8Q969P0 613 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 PEBP4Q96S96 227 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 TBC1D17Q9HA65 648 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 CXorf21Q9HAI6 301 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 TRIM39Q9HCM9 518 aa15.74■□□□□ 0.11
PCDHA3-201ENST00000522353 IGKV6D-21A0A0A0MT36 114 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 SEMA3DO95025 777 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 HOXD13P35453 343 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 MAP3K8P41279 467 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 C1orf61Q13536 156 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 KHDC1Q4VXA5 237 aaKnown RBP15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 GPALPP1Q8IXQ4 340 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 FAM156AQ8NDB6 213 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 OR5M3Q8NGP4 307 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 C10orf82Q8WW14 230 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 DAZLQ92904 295 aaKnown RBP15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 RBP7Q96R05 134 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 COPS4Q9BT78 406 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 FAM53CQ9NYF3 392 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 A0A0X1KG70 313 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 HYKKA2RU49 373 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 SEMA4FO95754 770 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 PGRP06401 933 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 RPS15P62841 145 aaKnown RBP15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 GALNTL5Q7Z4T8 443 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 PLXDC1Q8IUK5 500 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 TPT1P8Q9HAU6 139 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 CD320Q9NPF0 282 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 MATN2O00339 956 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 DNAJA1P31689 397 aaKnown RBP15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 FOXN2P32314 431 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 EMX2Q04743 252 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 ABHD18Q0P651 414 aa15.73■□□□□ 0.11
PCDHA3-201ENST00000522353 LIPJQ5W064 366 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms