RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 NCLNQ969V3 563 aa24.85■■□□□ 1.57
COL13A1-214ENST00000522165 SIPA1Q96FS4 1042 aa24.85■■□□□ 1.57
COL13A1-214ENST00000522165 FERD3LQ96RJ6 166 aa24.85■■□□□ 1.57
COL13A1-214ENST00000522165 WASH6PQ9NQA3 447 aa24.85■■□□□ 1.57
COL13A1-214ENST00000522165 PLEKHM1Q9Y4G2 1056 aa24.85■■□□□ 1.57
COL13A1-214ENST00000522165 A0A1W2PPV9 198 aa24.84■■□□□ 1.57
COL13A1-214ENST00000522165 DRD1P21728 446 aa24.84■■□□□ 1.57
COL13A1-214ENST00000522165 PTX3P26022 381 aaPredicted RBP24.84■■□□□ 1.57
COL13A1-214ENST00000522165 PPP2CBP62714 309 aa24.84■■□□□ 1.57
COL13A1-214ENST00000522165 PPP2CAP67775 309 aa24.84■■□□□ 1.57
COL13A1-214ENST00000522165 NKG7Q16617 165 aa24.84■■□□□ 1.57
COL13A1-214ENST00000522165 GPR155Q7Z3F1 870 aa24.84■■□□□ 1.57
COL13A1-214ENST00000522165 CARM1Q86X55 608 aa24.84■■□□□ 1.57
COL13A1-214ENST00000522165 VPS37AQ8NEZ2 397 aa24.84■■□□□ 1.57
COL13A1-214ENST00000522165 NETO1Q8TDF5 533 aa24.84■■□□□ 1.57
COL13A1-214ENST00000522165 PHF12Q96QT6 1004 aa24.84■■□□□ 1.57
COL13A1-214ENST00000522165 YY1AP1Q9H869 796 aa24.84■■□□□ 1.57
COL13A1-214ENST00000522165 TRPV5Q9NQA5 729 aa24.84■■□□□ 1.57
COL13A1-214ENST00000522165 SUFUQ9UMX1 484 aa24.84■■□□□ 1.57
COL13A1-214ENST00000522165 SLC31A1O15431 190 aa24.84■■□□□ 1.57
COL13A1-214ENST00000522165 KLHL18O94889 574 aa24.84■■□□□ 1.57
COL13A1-214ENST00000522165 GBAP04062 536 aa24.84■■□□□ 1.57
COL13A1-214ENST00000522165 FAM58BPP0C7Q3 252 aa24.84■■□□□ 1.57
COL13A1-214ENST00000522165 GPX2P18283 190 aa24.84■■□□□ 1.57
COL13A1-214ENST00000522165 EFNA1P20827 205 aaPredicted RBP24.84■■□□□ 1.57
COL13A1-214ENST00000522165 CLCN2P51788 898 aa24.84■■□□□ 1.57
COL13A1-214ENST00000522165 MYBPC1Q00872 1141 aa24.84■■□□□ 1.57
COL13A1-214ENST00000522165 GRSF1Q12849 480 aaKnown RBP eCLIP24.84■■□□□ 1.57
COL13A1-214ENST00000522165 RBBP5Q15291 538 aaKnown RBP24.84■■□□□ 1.57
COL13A1-214ENST00000522165 ABHD11Q8NFV4 315 aa24.84■■□□□ 1.57
COL13A1-214ENST00000522165 SNX19Q92543 992 aa24.84■■□□□ 1.57
COL13A1-214ENST00000522165 VPS50Q96JG6 964 aa24.84■■□□□ 1.57
COL13A1-214ENST00000522165 MYOCQ99972 504 aa24.84■■□□□ 1.57
COL13A1-214ENST00000522165 REEP4Q9H6H4 257 aa24.84■■□□□ 1.57
COL13A1-214ENST00000522165 NTN4Q9HB63 628 aa24.84■■□□□ 1.57
COL13A1-214ENST00000522165 CUEDC1Q9NWM3 386 aaPredicted RBP24.84■■□□□ 1.57
COL13A1-214ENST00000522165 CACNB4O00305 520 aaPredicted RBP24.83■■□□□ 1.57
COL13A1-214ENST00000522165 KCNJ13O60928 360 aa24.83■■□□□ 1.57
COL13A1-214ENST00000522165 DEAF1O75398 565 aaPredicted RBP24.83■■□□□ 1.57
COL13A1-214ENST00000522165 PRSS23O95084 383 aa24.83■■□□□ 1.57
COL13A1-214ENST00000522165 C7P10643 843 aa24.83■■□□□ 1.57
COL13A1-214ENST00000522165 PSMB5P28074 263 aa24.83■■□□□ 1.57
COL13A1-214ENST00000522165 USP30Q70CQ3 517 aa24.83■■□□□ 1.57
COL13A1-214ENST00000522165 LINC01555Q8NAE3 123 aa24.83■■□□□ 1.57
COL13A1-214ENST00000522165 TFAP2CQ92754 450 aa24.83■■□□□ 1.57
COL13A1-214ENST00000522165 SLC47A1Q96FL8 570 aa24.83■■□□□ 1.57
COL13A1-214ENST00000522165 AIF1LQ9BQI0 150 aa24.83■■□□□ 1.57
COL13A1-214ENST00000522165 RHBGQ9H310 441 aa24.83■■□□□ 1.57
COL13A1-214ENST00000522165 SH3BP4Q9P0V3 963 aa24.83■■□□□ 1.57
COL13A1-214ENST00000522165 MOSPD1Q9UJG1 213 aa24.83■■□□□ 1.57
COL13A1-214ENST00000522165 PCDHB11Q9Y5F2 797 aa24.83■■□□□ 1.57
COL13A1-214ENST00000522165 NUP214P35658 2090 aaPredicted RBP24.83■■□□□ 1.57
COL13A1-214ENST00000522165 PRKD3O94806 890 aa24.82■■□□□ 1.56
COL13A1-214ENST00000522165 MRPS21P82921 87 aaKnown RBP24.82■■□□□ 1.56
COL13A1-214ENST00000522165 COL19A1Q14993 1142 aa24.82■■□□□ 1.56
COL13A1-214ENST00000522165 IER5LQ5T953 404 aa24.82■■□□□ 1.56
COL13A1-214ENST00000522165 FAM124AQ86V42 546 aa24.82■■□□□ 1.56
COL13A1-214ENST00000522165 C16orf78Q8WTQ4 265 aa24.82■■□□□ 1.56
COL13A1-214ENST00000522165 ASB12Q8WXK4 309 aa24.82■■□□□ 1.56
COL13A1-214ENST00000522165 MYNNQ9NPC7 610 aa24.82■■□□□ 1.56
COL13A1-214ENST00000522165 OLAHQ9NV23 265 aa24.82■■□□□ 1.56
COL13A1-214ENST00000522165 NCKAP1Q9Y2A7 1128 aa24.82■■□□□ 1.56
COL13A1-214ENST00000522165 GPSM3Q9Y4H4 160 aa24.82■■□□□ 1.56
COL13A1-214ENST00000522165 MTCH2Q9Y6C9 303 aa24.82■■□□□ 1.56
COL13A1-214ENST00000522165 BRWD1Q9NSI6 2320 aa24.82■■□□□ 1.56
COL13A1-214ENST00000522165 UPK1AO00322 258 aa24.82■■□□□ 1.56
COL13A1-214ENST00000522165 EI24O14681 340 aa24.82■■□□□ 1.56
COL13A1-214ENST00000522165 CXCR2P25025 360 aa24.82■■□□□ 1.56
COL13A1-214ENST00000522165 CCR8P51685 355 aa24.82■■□□□ 1.56
COL13A1-214ENST00000522165 ZNF385BQ569K4 471 aa24.82■■□□□ 1.56
COL13A1-214ENST00000522165 RAB42Q8N4Z0 105 aa24.82■■□□□ 1.56
COL13A1-214ENST00000522165 POP5Q969H6 163 aaKnown RBP24.82■■□□□ 1.56
COL13A1-214ENST00000522165 SCARF2Q96GP6 870 aaPredicted RBP24.82■■□□□ 1.56
COL13A1-214ENST00000522165 CAMK1GQ96NX5 476 aa24.82■■□□□ 1.56
COL13A1-214ENST00000522165 ANKRD60Q9BZ19 345 aa24.82■■□□□ 1.56
COL13A1-214ENST00000522165 BHLHE41Q9C0J9 482 aaPredicted RBP24.82■■□□□ 1.56
COL13A1-214ENST00000522165 C8orf33Q9H7E9 229 aaPredicted RBP24.82■■□□□ 1.56
COL13A1-214ENST00000522165 IMP3Q9NV31 184 aaKnown RBP24.82■■□□□ 1.56
COL13A1-214ENST00000522165 SPTBN5Q9NRC6 3674 aaKnown RBP24.81■■□□□ 1.56
COL13A1-214ENST00000522165 RNASET2O00584 256 aaKnown RBP24.81■■□□□ 1.56
COL13A1-214ENST00000522165 TNFAIP8O95379 198 aa24.81■■□□□ 1.56
COL13A1-214ENST00000522165 SERPINA1P01009 418 aa24.81■■□□□ 1.56
COL13A1-214ENST00000522165 KLK1P06870 262 aa24.81■■□□□ 1.56
COL13A1-214ENST00000522165 IL1RNP18510 177 aa24.81■■□□□ 1.56
COL13A1-214ENST00000522165 CTBSQ01459 385 aa24.81■■□□□ 1.56
COL13A1-214ENST00000522165 LRRC74AQ0VAA2 488 aa24.81■■□□□ 1.56
COL13A1-214ENST00000522165 PDE7AQ13946 482 aa24.81■■□□□ 1.56
COL13A1-214ENST00000522165 CLCA4Q14CN2 919 aa24.81■■□□□ 1.56
COL13A1-214ENST00000522165 LPCAT2Q7L5N7 544 aa24.81■■□□□ 1.56
COL13A1-214ENST00000522165 MRGPRX1Q96LB2 322 aa24.81■■□□□ 1.56
COL13A1-214ENST00000522165 ZNF696Q9H7X3 374 aa24.81■■□□□ 1.56
COL13A1-214ENST00000522165 TPT1P8Q9HAU6 139 aa24.81■■□□□ 1.56
COL13A1-214ENST00000522165 AASDHPPTQ9NRN7 309 aa24.81■■□□□ 1.56
COL13A1-214ENST00000522165 C1orf226A1L170 272 aa24.81■■□□□ 1.56
COL13A1-214ENST00000522165 KCNK5O95279 499 aa24.81■■□□□ 1.56
COL13A1-214ENST00000522165 TBX6O95947 436 aaPredicted RBP24.81■■□□□ 1.56
COL13A1-214ENST00000522165 FURINP09958 794 aa24.81■■□□□ 1.56
COL13A1-214ENST00000522165 ZNF23P17027 643 aa24.81■■□□□ 1.56
COL13A1-214ENST00000522165 BMP8BP34820 402 aa24.81■■□□□ 1.56
COL13A1-214ENST00000522165 REEP5Q00765 189 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms