RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 APOA4P06727 396 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 CENPBP07199 599 aaPredicted RBP3.3□□□□□ -1.88
HDAC2-208ENST00000520746 CD48P09326 243 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 FRMD6-AS1P0C7T7 363 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 ERVK-10P10266 1014 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 EFNA1P20827 205 aaPredicted RBP3.3□□□□□ -1.88
HDAC2-208ENST00000520746 CA4P22748 312 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 MPZP25189 248 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 CCND3P30281 292 aaPredicted RBP3.3□□□□□ -1.88
HDAC2-208ENST00000520746 HOXC8P31273 242 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 CHRNA7P36544 502 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 MNDAP41218 407 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 BTDP43251 543 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 TUBB4BP68371 445 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 GSTO1P78417 241 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 KCNJ10P78508 379 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 RBPJQ06330 500 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 SHHQ15465 462 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 TAF13Q15543 124 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 ITPRIPL2Q3MIP1 535 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 KIAA1644Q3SXP7 199 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 SYT14P1Q58G82 188 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 TCP11X2Q5H9J9 407 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 CST9LP1Q5W188 147 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 DET1Q7L5Y6 550 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 NUP54Q7Z3B4 507 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 ZNF843Q8N446 348 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 MAPKAPK5-AS1Q8N8E1 139 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 XXYLT1Q8NBI6 393 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 KBTBD8Q8NFY9 601 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 OR11H4Q8NGC9 324 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 MRPS27Q92552 414 aaKnown RBP3.3□□□□□ -1.88
HDAC2-208ENST00000520746 VPS33AQ96AX1 596 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 ZNF653Q96CK0 615 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 ARSGQ96EG1 525 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 CFAP57Q96MR6 1250 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 URM1Q9BTM9 101 aaKnown RBP3.3□□□□□ -1.88
HDAC2-208ENST00000520746 FSD1Q9BTV5 496 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 NUP85Q9BW27 656 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 LAT2Q9GZY6 243 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 MIS12Q9H081 205 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 OR10A4Q9H209 315 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 SIX2Q9NPC8 291 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 SDR39U1Q9NRG7 319 aaPredicted RBP3.3□□□□□ -1.88
HDAC2-208ENST00000520746 GKN1Q9NS71 199 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 ZNF701Q9NV72 531 aaPredicted RBP3.3□□□□□ -1.88
HDAC2-208ENST00000520746 INTS10Q9NVR2 710 aaKnown RBP3.3□□□□□ -1.88
HDAC2-208ENST00000520746 C5AR2Q9P296 337 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 LRRC37AA6NMS7 1700 aa3.3□□□□□ -1.88
HDAC2-208ENST00000520746 KIAA0100Q14667 2235 aaKnown RBP3.29□□□□□ -1.88
HDAC2-208ENST00000520746 STK36Q9NRP7 1315 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 ZNF197O14709 1029 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 ATP6V0E1O15342 81 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 DKC1O60832 514 aaKnown RBP eCLIP3.29□□□□□ -1.88
HDAC2-208ENST00000520746 C22orf31O95567 290 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 BAG3O95817 575 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 OR52Z1P0C646 297 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 PLA2G4BP0C869 781 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 PRSS56P0CW18 603 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 ACHEP22303 614 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 AZGP1P25311 298 aaKnown RBP3.29□□□□□ -1.88
HDAC2-208ENST00000520746 ITGA3P26006 1051 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 B3GALT5-AS1P59052 145 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 TIMM10P62072 90 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 MAT1AQ00266 395 aaKnown RBP3.29□□□□□ -1.88
HDAC2-208ENST00000520746 ACSM1Q08AH1 577 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 ZNF415Q09FC8 603 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 CAMK2DQ13557 499 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 CCL14Q16627 93 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 ODF4Q2M2E3 257 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 GTDC1Q4AE62 458 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 ARHGEF16Q5VV41 709 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 PRR27Q6MZM9 219 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 C15orf39Q6ZRI6 1047 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 CHST3Q7LGC8 479 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 NUDT13Q86X67 352 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 MFN1Q8IWA4 741 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 FAM9BQ8IZU0 186 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 EID3Q8N140 333 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 THAP8Q8NA92 274 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 BADQ92934 168 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 MOB3AQ96BX8 217 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 RADILQ96JH8 1075 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 ZNF558Q96NG5 402 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 GUCD1Q96NT3 240 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 RAD9AQ99638 391 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 BAG1Q99933 345 aaPredicted RBP3.29□□□□□ -1.88
HDAC2-208ENST00000520746 IDI2Q9BXS1 227 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 ZNF696Q9H7X3 374 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 TMED3Q9Y3Q3 217 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 CCL27Q9Y4X3 112 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 MKI67P46013 3256 aaKnown RBP3.29□□□□□ -1.88
HDAC2-208ENST00000520746 DLG5Q8TDM6 1919 aa3.29□□□□□ -1.88
HDAC2-208ENST00000520746 CEP290O15078 2479 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 FANCIQ9NVI1 1328 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 HTTP42858 3142 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 IGKV3D-15A0A087WSY6 115 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.28□□□□□ -1.88
HDAC2-208ENST00000520746 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.28□□□□□ -1.88
HDAC2-208ENST00000520746 C19orf81C9J6K1 198 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms