RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 SDC4P31431 198 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 MMP13P45452 471 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 MAN2A2P49641 1150 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 GTF2H3Q13889 308 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 SIX1Q15475 284 aaPredicted RBP6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 PRTGQ2VWP7 1150 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 RALGPS1Q5JS13 557 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 ALG1LQ6GMV1 187 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 FAM166AQ6J272 317 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 PAPD4Q6PIY7 484 aaKnown RBP6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 SARM1Q6SZW1 724 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 PEG10Q86TG7 708 aaKnown RBP6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 HOOK3Q86VS8 718 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 NDUFAF2Q8N183 169 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 TEX26Q8N6G2 289 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 ZNF441Q8N8Z8 693 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 TTC29Q8NA56 475 aaPredicted RBP6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 LINC01555Q8NAE3 123 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 C9orf106Q8NAJ2 232 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 LINC00301Q8NCQ3 95 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 OR5AR1Q8NGP9 310 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 GDAP1Q8TB36 358 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 CCHCR1Q8TD31 782 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 DENND1AQ8TEH3 1009 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 UBASH3BQ8TF42 649 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 CPA5Q8WXQ8 436 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 SELENOSQ9BQE4 189 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 C7orf69Q9H7B7 122 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 MANSC1Q9H8J5 431 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 PCDH9Q9HC56 1237 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 IL26Q9NPH9 171 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 C14orf105Q9NVL8 296 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 ARMCX3Q9UH62 379 aaPredicted RBP6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 DNPEPQ9ULA0 475 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 SOX13Q9UN79 622 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 LIPT1Q9Y234 373 aa6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 MAGED1Q9Y5V3 778 aaPredicted RBP6.22□□□□□ -1.41
CTNNA1-216ENST00000519489 ABCA13Q86UQ4 5058 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 EPHB6O15197 1021 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 CCP110O43303 1012 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 SSX4O60224 188 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 SERPINC1P01008 464 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 CD8AP01732 235 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 RFPL3SP0C7P2 107 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 CYP11B1P15538 503 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 SLCO1A2P46721 670 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 SLC26A5P58743 744 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 PLGLB1Q02325 96 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 GALNT2Q10471 571 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 USP10Q14694 798 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 FAM214AQ32MH5 1076 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 SFT2D3Q587I9 215 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 ALKBH2Q6NS38 261 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 SCYL2Q6P3W7 929 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 DNAJC14Q6Y2X3 702 aaPredicted RBP6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 SH2D5Q6ZV89 423 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 CYP4Z2PQ8N1L4 340 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 FAM109AQ8N4B1 249 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 C2orf73Q8N5S3 287 aaPredicted RBP6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 DDHD1Q8NEL9 900 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 KAT2AQ92830 837 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 NEUROG1Q92886 237 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 TSLPQ969D9 159 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 SARAFQ96BY9 339 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 ZC3HAV1LQ96H79 300 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 TRIB3Q96RU7 358 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 C11orf70Q9BRQ4 267 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 TMEM204Q9BSN7 226 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 SLC6A15Q9H2J7 730 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 ZNHIT6Q9NWK9 470 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 KCMF1Q9P0J7 381 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 NDRG3Q9UGV2 375 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 TRHDEQ9UKU6 1024 aa6.21□□□□□ -1.42
CTNNA1-216ENST00000519489 A0A0A6YYC8 382 aaPredicted RBP6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 TRGV5A0A0B4J1U4 118 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 MBD3L3A6NE82 208 aaPredicted RBP6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 A8MXE2 369 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 ISM1B1AKI9 464 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 I3L1I5 382 aaPredicted RBP6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 DDX3XO00571 662 aaKnown RBP eCLIP6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 IL18BPO95998 194 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 PCK1P35558 622 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 EIF1AXP47813 144 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 MTTPP55157 894 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 RPL26P61254 145 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 COL10A1Q03692 680 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 DPYSQ14117 519 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 SLC10A1Q14973 349 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 EXT1Q16394 746 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 TCTE1Q5JU00 501 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 LCE3BQ5TA77 95 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 MARC1Q5VT66 337 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 WDR59Q6PJI9 974 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 RFX8Q6ZV50 586 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 CYP4V2Q6ZWL3 525 aaPredicted RBP6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 POLNQ7Z5Q5 900 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 LACC1Q8IV20 430 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 TRIM42Q8IWZ5 723 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 FBXW8Q8N3Y1 598 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms