RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 CFAP157Q5JU67 520 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 WASHC2DQ5SRD0 308 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 CLEC6AQ6EIG7 209 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 PWWP2BQ6NUJ5 590 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 MED27Q6P2C8 311 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 UBE3DQ7Z6J8 389 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 ZNF781Q8N8C0 355 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 KCT2Q8NC54 265 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 WDR36Q8NI36 951 aaKnown RBP9.43□□□□□ -0.9
CLN8-202ENST00000517514 NT5CQ8TCD5 201 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 USP7Q93009 1102 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 ATP6V1E2Q96A05 226 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 THAP11Q96EK4 314 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 SMIM10Q96HG1 83 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 CMKLR1Q99788 373 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 SCNM1Q9BWG6 230 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 MS4A8Q9BY19 250 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 STRADBQ9C0K7 418 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 SLC6A16Q9GZN6 736 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 PITHD1Q9GZP4 211 aaPredicted RBP9.43□□□□□ -0.9
CLN8-202ENST00000517514 KLHL31Q9H511 634 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 MANSC1Q9H8J5 431 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 SLCO1B3Q9NPD5 702 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 ASCL3Q9NQ33 180 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 PISDQ9UG56 409 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 ZFP69BQ9UJL9 534 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 RUVBL1Q9Y265 456 aaKnown RBP9.43□□□□□ -0.9
CLN8-202ENST00000517514 CCL27Q9Y4X3 112 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 B3GALT1Q9Y5Z6 326 aa9.43□□□□□ -0.9
CLN8-202ENST00000517514 SEC16AO15027 2179 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 FOXS1O43638 330 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 SRPX2O60687 465 aaPredicted RBP9.42□□□□□ -0.9
CLN8-202ENST00000517514 DNAJB6O75190 326 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 KLHL18O94889 574 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 PDYNP01213 254 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 ENO1P06733 434 aaKnown RBP9.42□□□□□ -0.9
CLN8-202ENST00000517514 GRK2P25098 689 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 SERPINB5P36952 375 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 ARL4DP49703 201 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 RPS13P62277 151 aaKnown RBP9.42□□□□□ -0.9
CLN8-202ENST00000517514 GUCY1A3Q02108 690 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 ACY1Q03154 408 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 FOXM1Q08050 763 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 EIF3IQ13347 325 aaKnown RBP9.42□□□□□ -0.9
CLN8-202ENST00000517514 ABRAXAS2Q15018 415 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 ADPRMQ3LIE5 342 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 ZC3H12BQ5HYM0 836 aaKnown RBP9.42□□□□□ -0.9
CLN8-202ENST00000517514 TMTC4Q5T4D3 741 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 KANK2Q63ZY3 851 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 ZNF385CQ66K41 422 aaPredicted RBP9.42□□□□□ -0.9
CLN8-202ENST00000517514 TMEM214Q6NUQ4 689 aaKnown RBP9.42□□□□□ -0.9
CLN8-202ENST00000517514 SCIMPQ6UWF3 145 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 RGS9BPQ6ZS82 235 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 PRSS41Q7RTY9 318 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 ASPGQ86U10 573 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 MYLK4Q86YV6 388 aaPredicted RBP9.42□□□□□ -0.9
CLN8-202ENST00000517514 KRT78Q8N1N4 520 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 ZNF655Q8N720 491 aaPredicted RBP9.42□□□□□ -0.9
CLN8-202ENST00000517514 CSNK1A1LQ8N752 337 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 HUS1BQ8NHY5 278 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 RAB3IL1Q8TBN0 382 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 SLC13A3Q8WWT9 602 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 MTFMTQ96DP5 389 aaKnown RBP9.42□□□□□ -0.9
CLN8-202ENST00000517514 HBEGFQ99075 208 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 MTERF1Q99551 399 aaKnown RBP9.42□□□□□ -0.9
CLN8-202ENST00000517514 SLC29A3Q9BZD2 475 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 AKIRIN1Q9H9L7 192 aaPredicted RBP9.42□□□□□ -0.9
CLN8-202ENST00000517514 POLR1BQ9H9Y6 1135 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 LHX9Q9NQ69 397 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 DMRT3Q9NQL9 472 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 PNPOQ9NVS9 261 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 SLC39A1Q9NY26 324 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 FOXJ2Q9P0K8 574 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 TMEM184BQ9Y519 407 aaPredicted RBP9.42□□□□□ -0.9
CLN8-202ENST00000517514 PCDHGA8Q9Y5G5 932 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 PCDHGA3Q9Y5H0 932 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 PCDHGA11Q9Y5H2 935 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 PTGDR2Q9Y5Y4 395 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 SCN2AQ99250 2005 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 ZFHX4Q86UP3 3567 aa9.42□□□□□ -0.9
CLN8-202ENST00000517514 DMXL2Q8TDJ6 3036 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 SERTM1A2A2V5 107 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 LRIT2A6NDA9 550 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 TRABD2BA6NFA1 517 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 MAGEB17A8MXT2 336 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 CDRT15L2A8MXV6 281 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 ZNF195O14628 629 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 AZIN1O14977 448 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 ZNF749O43361 778 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 SH3BGRLO75368 114 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 CLEC3AO75596 197 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 EIF2S1P05198 315 aaKnown RBP9.41□□□□□ -0.9
CLN8-202ENST00000517514 ADRB1P08588 477 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 PCNAP12004 261 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 CXCR2P25025 360 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 GRK3P35626 688 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 MDH1P40925 334 aaKnown RBP9.41□□□□□ -0.9
CLN8-202ENST00000517514 PIK3CBP42338 1070 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 MAPK10P53779 464 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 ITGA1P56199 1179 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms