RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 KCNA7Q96RP8 456 aa20.05■□□□□ 0.8
LSM6-207ENST00000515311 FBXO8Q9NRD0 319 aa20.05■□□□□ 0.8
LSM6-207ENST00000515311 OCIAD1Q9NX40 245 aa20.05■□□□□ 0.8
LSM6-207ENST00000515311 ZDHHC2Q9UIJ5 367 aa20.05■□□□□ 0.8
LSM6-207ENST00000515311 PPT2Q9UMR5 302 aa20.05■□□□□ 0.8
LSM6-207ENST00000515311 LOXL2Q9Y4K0 774 aa20.05■□□□□ 0.8
LSM6-207ENST00000515311 SPTBN4Q9H254 2564 aa20.04■□□□□ 0.8
LSM6-207ENST00000515311 LOC105369274A0A096LPK9 316 aa20.04■□□□□ 0.8
LSM6-207ENST00000515311 LOC102723532A0A0G2JNH3 316 aa20.04■□□□□ 0.8
LSM6-207ENST00000515311 EFCAB7A8K855 629 aa20.04■□□□□ 0.8
LSM6-207ENST00000515311 FOXE1O00358 373 aaPredicted RBP20.04■□□□□ 0.8
LSM6-207ENST00000515311 MANBAO00462 879 aa20.04■□□□□ 0.8
LSM6-207ENST00000515311 CHEK2O96017 543 aa20.04■□□□□ 0.8
LSM6-207ENST00000515311 SLC35G6P0C7Q6 338 aa20.04■□□□□ 0.8
LSM6-207ENST00000515311 PCNAP12004 261 aa20.04■□□□□ 0.8
LSM6-207ENST00000515311 RPL14P50914 215 aaKnown RBP20.04■□□□□ 0.8
LSM6-207ENST00000515311 VSX2P58304 361 aaPredicted RBP20.04■□□□□ 0.8
LSM6-207ENST00000515311 TARDBPQ13148 414 aaKnown RBP eCLIP20.04■□□□□ 0.8
LSM6-207ENST00000515311 MANEAQ5SRI9 462 aa20.04■□□□□ 0.8
LSM6-207ENST00000515311 CLEC6AQ6EIG7 209 aa20.04■□□□□ 0.8
LSM6-207ENST00000515311 RNF165Q6ZSG1 346 aa20.04■□□□□ 0.8
LSM6-207ENST00000515311 VN1R5Q7Z5H4 357 aa20.04■□□□□ 0.8
LSM6-207ENST00000515311 OR4N4Q8N0Y3 316 aa20.04■□□□□ 0.8
LSM6-207ENST00000515311 CAMKVQ8NCB2 501 aa20.04■□□□□ 0.8
LSM6-207ENST00000515311 CREB3L4Q8TEY5 395 aa20.04■□□□□ 0.8
LSM6-207ENST00000515311 ZNF473Q8WTR7 871 aaKnown RBP20.04■□□□□ 0.8
LSM6-207ENST00000515311 USP7Q93009 1102 aa20.04■□□□□ 0.8
LSM6-207ENST00000515311 OR6C1Q96RD1 312 aa20.04■□□□□ 0.8
LSM6-207ENST00000515311 NLNQ9BYT8 704 aa20.04■□□□□ 0.8
LSM6-207ENST00000515311 PSD3Q9NYI0 1048 aa20.04■□□□□ 0.8
LSM6-207ENST00000515311 SERTAD3Q9UJW9 196 aa20.04■□□□□ 0.8
LSM6-207ENST00000515311 TIMM22Q9Y584 194 aa20.04■□□□□ 0.8
LSM6-207ENST00000515311 TMEM150CB9EJG8 249 aa20.03■□□□□ 0.8
LSM6-207ENST00000515311 H3BMH7 237 aa20.03■□□□□ 0.8
LSM6-207ENST00000515311 ULK1O75385 1050 aa20.03■□□□□ 0.8
LSM6-207ENST00000515311 OR2B3O76000 313 aa20.03■□□□□ 0.8
LSM6-207ENST00000515311 SERPINA6P08185 405 aa20.03■□□□□ 0.8
LSM6-207ENST00000515311 ITGA1P56199 1179 aa20.03■□□□□ 0.8
LSM6-207ENST00000515311 UGT3A2Q3SY77 523 aa20.03■□□□□ 0.8
LSM6-207ENST00000515311 ADNP2Q6IQ32 1131 aa20.03■□□□□ 0.8
LSM6-207ENST00000515311 AFAP1L2Q8N4X5 818 aa20.03■□□□□ 0.8
LSM6-207ENST00000515311 CSNK1A1LQ8N752 337 aa20.03■□□□□ 0.8
LSM6-207ENST00000515311 WDR36Q8NI36 951 aaKnown RBP20.03■□□□□ 0.8
LSM6-207ENST00000515311 NT5CQ8TCD5 201 aa20.03■□□□□ 0.8
LSM6-207ENST00000515311 AGR3Q8TD06 166 aa20.03■□□□□ 0.8
LSM6-207ENST00000515311 SLC13A3Q8WWT9 602 aa20.03■□□□□ 0.8
LSM6-207ENST00000515311 FAR2Q96K12 515 aa20.03■□□□□ 0.8
LSM6-207ENST00000515311 BRF2Q9HAW0 419 aa20.03■□□□□ 0.8
LSM6-207ENST00000515311 SLCO1B3Q9NPD5 702 aa20.03■□□□□ 0.8
LSM6-207ENST00000515311 DMRT3Q9NQL9 472 aa20.03■□□□□ 0.8
LSM6-207ENST00000515311 DNAJC15Q9Y5T4 150 aa20.03■□□□□ 0.8
LSM6-207ENST00000515311 SERTM1A2A2V5 107 aa20.02■□□□□ 0.8
LSM6-207ENST00000515311 FITM1A5D6W6 292 aa20.02■□□□□ 0.8
LSM6-207ENST00000515311 TMEM233B4DJY2 109 aa20.02■□□□□ 0.8
LSM6-207ENST00000515311 TCP11X1B4DZS4 312 aa20.02■□□□□ 0.8
LSM6-207ENST00000515311 PLD2O14939 933 aa20.02■□□□□ 0.8
LSM6-207ENST00000515311 ZSCAN9O15535 394 aaPredicted RBP20.02■□□□□ 0.8
LSM6-207ENST00000515311 NDUFS4O43181 175 aa20.02■□□□□ 0.8
LSM6-207ENST00000515311 FGF5P12034 268 aa20.02■□□□□ 0.8
LSM6-207ENST00000515311 CCL4P13236 92 aa20.02■□□□□ 0.8
LSM6-207ENST00000515311 HSD3B1P14060 373 aa20.02■□□□□ 0.8
LSM6-207ENST00000515311 HSD3B2P26439 372 aa20.02■□□□□ 0.8
LSM6-207ENST00000515311 HK2P52789 917 aa20.02■□□□□ 0.8
LSM6-207ENST00000515311 EMP3P54852 163 aa20.02■□□□□ 0.8
LSM6-207ENST00000515311 RAB15P59190 212 aa20.02■□□□□ 0.8
LSM6-207ENST00000515311 CYP4F2P78329 520 aa20.02■□□□□ 0.8
LSM6-207ENST00000515311 FOXM1Q08050 763 aa20.02■□□□□ 0.8
LSM6-207ENST00000515311 RGS1Q08116 209 aa20.02■□□□□ 0.8
LSM6-207ENST00000515311 PRTGQ2VWP7 1150 aa20.02■□□□□ 0.8
LSM6-207ENST00000515311 TCHHL1Q5QJ38 904 aaPredicted RBP20.02■□□□□ 0.8
LSM6-207ENST00000515311 WASHC2DQ5SRD0 308 aa20.02■□□□□ 0.8
LSM6-207ENST00000515311 TLDC1Q6P9B6 456 aa20.02■□□□□ 0.8
LSM6-207ENST00000515311 CRLF3Q8IUI8 442 aa20.02■□□□□ 0.8
LSM6-207ENST00000515311 GPR135Q8IZ08 494 aa20.02■□□□□ 0.8
LSM6-207ENST00000515311 OR1L3Q8NH93 324 aa20.02■□□□□ 0.8
LSM6-207ENST00000515311 SELENOMQ8WWX9 145 aa20.02■□□□□ 0.8
LSM6-207ENST00000515311 MTERF1Q99551 399 aaKnown RBP20.02■□□□□ 0.8
LSM6-207ENST00000515311 CCT7Q99832 543 aa20.02■□□□□ 0.8
LSM6-207ENST00000515311 FARSBQ9NSD9 589 aaKnown RBP20.02■□□□□ 0.8
LSM6-207ENST00000515311 RARRES3Q9UL19 164 aa20.02■□□□□ 0.8
LSM6-207ENST00000515311 KNTC1P50748 2209 aa20.02■□□□□ 0.79
LSM6-207ENST00000515311 SLCO1B7G3V0H7 640 aa20.01■□□□□ 0.79
LSM6-207ENST00000515311 POLR1CO15160 346 aaPredicted RBP20.01■□□□□ 0.79
LSM6-207ENST00000515311 POLR3GO15318 223 aaPredicted RBP20.01■□□□□ 0.79
LSM6-207ENST00000515311 P2RX6O15547 441 aa20.01■□□□□ 0.79
LSM6-207ENST00000515311 PDYNP01213 254 aa20.01■□□□□ 0.79
LSM6-207ENST00000515311 EIF2S1P05198 315 aaKnown RBP20.01■□□□□ 0.79
LSM6-207ENST00000515311 JMJD7P0C870 316 aa20.01■□□□□ 0.79
LSM6-207ENST00000515311 HTR6P50406 440 aa20.01■□□□□ 0.79
LSM6-207ENST00000515311 NEK2P51955 445 aa20.01■□□□□ 0.79
LSM6-207ENST00000515311 CSTF3Q12996 717 aaKnown RBP20.01■□□□□ 0.79
LSM6-207ENST00000515311 DDX39BQ13838 428 aaKnown RBP20.01■□□□□ 0.79
LSM6-207ENST00000515311 GRM7Q14831 915 aa20.01■□□□□ 0.79
LSM6-207ENST00000515311 ABRAXAS2Q15018 415 aa20.01■□□□□ 0.79
LSM6-207ENST00000515311 SGO1Q5FBB7 561 aa20.01■□□□□ 0.79
LSM6-207ENST00000515311 TRIM46Q7Z4K8 759 aa20.01■□□□□ 0.79
LSM6-207ENST00000515311 GBP7Q8N8V2 638 aaPredicted RBP20.01■□□□□ 0.79
LSM6-207ENST00000515311 TWIST2Q8WVJ9 160 aa20.01■□□□□ 0.79
LSM6-207ENST00000515311 CMTM7Q96FZ5 175 aa20.01■□□□□ 0.79
LSM6-207ENST00000515311 MS4A8Q9BY19 250 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms