RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 EFTUD2Q15029 972 aaKnown RBP eCLIP4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 IQCCQ4KMZ1 466 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 OTUD3Q5T2D3 398 aaPredicted RBP4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 KLHL10Q6JEL2 608 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 C11orf88Q6PI97 169 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 FIP1L1Q6UN15 594 aaKnown RBP4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 PHLDB2Q86SQ0 1253 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 CATSPERDQ86XM0 798 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 C4orf19Q8IY42 314 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 TDHQ8IZJ6 230 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 SYCP3Q8IZU3 236 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 CENPTQ96BT3 561 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 NXPE2Q96DL1 559 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 ART5Q96L15 291 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 UTP14AQ9BVJ6 771 aaKnown RBP4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 CLEC7AQ9BXN2 247 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 DNAI2Q9GZS0 605 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 C2orf40Q9H1Z8 148 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 UBQLN3Q9H347 655 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 TMEM206Q9H813 350 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 C10orf88Q9H8K7 445 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 SLCO1C1Q9NYB5 712 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 GPR132Q9UNW8 380 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 AGTPBP1Q9UPW5 1226 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 NSG2Q9Y328 171 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 ANTXRLA6NF34 631 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 NPIPA3F8WFD2 350 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 H0YIG0 161 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 RTCAO00442 366 aaKnown RBP4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 ACSL4O60488 711 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 SLC16A8O95907 504 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 YES1P07947 543 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 PIK3R1P27986 724 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 ATP5DP30049 168 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 NPBWR1P48145 328 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 CDH18Q13634 790 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 MTF1Q14872 753 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 MRGPRG-AS1Q2M3A8 158 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 ZNF542PQ5EBM4 170 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 CCDC158Q5M9N0 1113 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 LINC00696Q6ZRV3 163 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 TUSC5Q8IXB3 177 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 PRSS35Q8N3Z0 413 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 ZNF248Q8NDW4 579 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 OR7G3Q8NG95 312 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 OR2T6Q8NHC8 308 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 AFAP1L1Q8TED9 768 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 GRK7Q8WTQ7 553 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 TSSK2Q96PF2 358 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 ATG101Q9BSB4 218 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 TDRD1Q9BXT4 1180 aaKnown RBP4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 NYXQ9GZU5 481 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 SRD5A3Q9H8P0 318 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 PANK4Q9NVE7 773 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 HACD3Q9P035 362 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 FBXL4Q9UKA2 621 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 GMEB2Q9UKD1 530 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 PA2G4Q9UQ80 394 aaKnown RBP4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 LIPT1Q9Y234 373 aa4.42□□□□□ -1.7
HMGCS1-207ENST00000514610 ILVBLA1L0T0 632 aa4.41□□□□□ -1.7
HMGCS1-207ENST00000514610 MAGEC1O60732 1142 aa4.41□□□□□ -1.7
HMGCS1-207ENST00000514610 SAP30O75446 220 aa4.41□□□□□ -1.7
HMGCS1-207ENST00000514610 DUS4LO95620 317 aaKnown RBP4.41□□□□□ -1.7
HMGCS1-207ENST00000514610 GOT1P17174 413 aa4.41□□□□□ -1.7
HMGCS1-207ENST00000514610 ITIH1P19827 911 aa4.41□□□□□ -1.7
HMGCS1-207ENST00000514610 MMP12P39900 470 aa4.41□□□□□ -1.7
HMGCS1-207ENST00000514610 FRKP42685 505 aaPredicted RBP4.41□□□□□ -1.7
HMGCS1-207ENST00000514610 SGCGQ13326 291 aa4.41□□□□□ -1.7
HMGCS1-207ENST00000514610 DRP2Q13474 957 aa4.41□□□□□ -1.7
HMGCS1-207ENST00000514610 SGSM1Q2NKQ1 1148 aa4.41□□□□□ -1.7
HMGCS1-207ENST00000514610 DHRS11Q6UWP2 260 aa4.41□□□□□ -1.7
HMGCS1-207ENST00000514610 COX8CQ7Z4L0 72 aa4.41□□□□□ -1.7
HMGCS1-207ENST00000514610 ANKRD46Q86W74 232 aa4.41□□□□□ -1.7
HMGCS1-207ENST00000514610 AQP12AQ8IXF9 295 aa4.41□□□□□ -1.7
HMGCS1-207ENST00000514610 ZC3H3Q8IXZ2 948 aaKnown RBP4.41□□□□□ -1.7
HMGCS1-207ENST00000514610 WDSUB1Q8N9V3 476 aa4.41□□□□□ -1.7
HMGCS1-207ENST00000514610 KIAA0895Q8NCT3 520 aa4.41□□□□□ -1.7
HMGCS1-207ENST00000514610 OR6S1Q8NH40 331 aa4.41□□□□□ -1.7
HMGCS1-207ENST00000514610 MAPK15Q8TD08 544 aa4.41□□□□□ -1.7
HMGCS1-207ENST00000514610 WBP2Q969T9 261 aa4.41□□□□□ -1.7
HMGCS1-207ENST00000514610 TEKT1Q969V4 418 aa4.41□□□□□ -1.7
HMGCS1-207ENST00000514610 VMP1Q96GC9 406 aa4.41□□□□□ -1.7
HMGCS1-207ENST00000514610 HNRNPABQ99729 332 aaKnown RBP4.41□□□□□ -1.7
HMGCS1-207ENST00000514610 FUT8Q9BYC5 575 aa4.41□□□□□ -1.7
HMGCS1-207ENST00000514610 BARHL2Q9NY43 387 aa4.41□□□□□ -1.7
HMGCS1-207ENST00000514610 CNIH4Q9P003 139 aa4.41□□□□□ -1.7
HMGCS1-207ENST00000514610 VPS18Q9P253 973 aa4.41□□□□□ -1.7
HMGCS1-207ENST00000514610 COLEC10Q9Y6Z7 277 aa4.41□□□□□ -1.7
HMGCS1-207ENST00000514610 FAM170AA1A519 330 aa4.4□□□□□ -1.71
HMGCS1-207ENST00000514610 CCER2I3L3R5 266 aa4.4□□□□□ -1.71
HMGCS1-207ENST00000514610 MLNRO43193 412 aa4.4□□□□□ -1.71
HMGCS1-207ENST00000514610 KIF5CO60282 957 aa4.4□□□□□ -1.71
HMGCS1-207ENST00000514610 CYTIPO60759 359 aa4.4□□□□□ -1.71
HMGCS1-207ENST00000514610 PRKAR1AP10644 381 aa4.4□□□□□ -1.71
HMGCS1-207ENST00000514610 TAB1Q15750 504 aa4.4□□□□□ -1.71
HMGCS1-207ENST00000514610 DUSP5Q16690 384 aa4.4□□□□□ -1.71
HMGCS1-207ENST00000514610 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.4□□□□□ -1.71
HMGCS1-207ENST00000514610 TCEANCQ8N8B7 351 aa4.4□□□□□ -1.71
HMGCS1-207ENST00000514610 SNRNP40Q96DI7 357 aaKnown RBP4.4□□□□□ -1.71
HMGCS1-207ENST00000514610 ZNF300Q96RE9 604 aaPredicted RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms