RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 SLC25A19Q9HC21 320 aa7.16□□□□□ -1.26
CLIP1-205ENST00000514271 POLMQ9NP87 494 aaPredicted RBP7.16□□□□□ -1.26
CLIP1-205ENST00000514271 MARCH4Q9P2E8 410 aaPredicted RBP7.16□□□□□ -1.26
CLIP1-205ENST00000514271 PSORS1C1Q9UIG5 152 aa7.16□□□□□ -1.26
CLIP1-205ENST00000514271 MKLN1Q9UL63 735 aa7.16□□□□□ -1.26
CLIP1-205ENST00000514271 SLC39A10Q9ULF5 831 aa7.16□□□□□ -1.26
CLIP1-205ENST00000514271 CARD8Q9Y2G2 431 aa7.16□□□□□ -1.26
CLIP1-205ENST00000514271 SIT1Q9Y3P8 196 aa7.16□□□□□ -1.26
CLIP1-205ENST00000514271 PKP3Q9Y446 797 aa7.16□□□□□ -1.26
CLIP1-205ENST00000514271 HS3ST4Q9Y661 456 aa7.16□□□□□ -1.26
CLIP1-205ENST00000514271 WNT6Q9Y6F9 365 aa7.16□□□□□ -1.26
CLIP1-205ENST00000514271 E9PAM4 449 aa7.16□□□□□ -1.26
CLIP1-205ENST00000514271 NDUFA2O43678 99 aa7.16□□□□□ -1.26
CLIP1-205ENST00000514271 LGI1O95970 557 aa7.16□□□□□ -1.26
CLIP1-205ENST00000514271 HLA-DQB2P05538 268 aa7.16□□□□□ -1.26
CLIP1-205ENST00000514271 RBP1P09455 135 aa7.16□□□□□ -1.26
CLIP1-205ENST00000514271 HOXD9P28356 352 aaPredicted RBP7.16□□□□□ -1.26
CLIP1-205ENST00000514271 WNT3AP56704 352 aa7.16□□□□□ -1.26
CLIP1-205ENST00000514271 ST8SIA6P61647 398 aa7.16□□□□□ -1.26
CLIP1-205ENST00000514271 ERVK-8P63133 956 aa7.16□□□□□ -1.26
CLIP1-205ENST00000514271 DNASE1L3Q13609 305 aa7.16□□□□□ -1.26
CLIP1-205ENST00000514271 RAPSNQ13702 412 aa7.16□□□□□ -1.26
CLIP1-205ENST00000514271 PCBP2Q15366 365 aaKnown RBP eCLIP7.16□□□□□ -1.26
CLIP1-205ENST00000514271 CDONQ4KMG0 1287 aa7.16□□□□□ -1.26
CLIP1-205ENST00000514271 CCDC58Q4VC31 144 aa7.16□□□□□ -1.26
CLIP1-205ENST00000514271 TIGD7Q6NT04 549 aaPredicted RBP7.16□□□□□ -1.26
CLIP1-205ENST00000514271 ZC3H14Q6PJT7 736 aaKnown RBP7.16□□□□□ -1.26
CLIP1-205ENST00000514271 SYT13Q7L8C5 426 aa7.16□□□□□ -1.26
CLIP1-205ENST00000514271 SMAD5Q99717 465 aaKnown RBP7.16□□□□□ -1.26
CLIP1-205ENST00000514271 GABRG3Q99928 467 aa7.16□□□□□ -1.26
CLIP1-205ENST00000514271 P2RY12Q9H244 342 aa7.16□□□□□ -1.26
CLIP1-205ENST00000514271 GLOD4Q9HC38 313 aa7.16□□□□□ -1.26
CLIP1-205ENST00000514271 EIF3KQ9UBQ5 218 aaKnown RBP7.16□□□□□ -1.26
CLIP1-205ENST00000514271 PCDHGB2Q9Y5G2 931 aa7.16□□□□□ -1.26
CLIP1-205ENST00000514271 PCDHGA6Q9Y5G7 932 aa7.16□□□□□ -1.26
CLIP1-205ENST00000514271 KLK4Q9Y5K2 254 aa7.16□□□□□ -1.26
CLIP1-205ENST00000514271 KLF2Q9Y5W3 355 aaPredicted RBP7.16□□□□□ -1.26
CLIP1-205ENST00000514271 SAGE2PA6NJ88 616 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 USP12O75317 370 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 KAT7O95251 611 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 KLKB1P03952 638 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 SLC19A1P41440 591 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 RAD52P43351 418 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 RPS5P46782 204 aaKnown RBP7.15□□□□□ -1.26
CLIP1-205ENST00000514271 CSNK1DP48730 415 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 ARSDP51689 593 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 DGKEP52429 567 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 TPI1P60174 286 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 STX1BP61266 288 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 PWP1Q13610 501 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 CCINQ13939 588 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 CAPRIN1Q14444 709 aaKnown RBP7.15□□□□□ -1.26
CLIP1-205ENST00000514271 GAB4Q2WGN9 574 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 POMZP3Q6PJE2 187 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 KDELC2Q7Z4H8 507 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 ENTHD1Q8IYW4 607 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 USP7Q93009 1102 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 LMLNQ96KR4 655 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 RPRD1AQ96P16 312 aaPredicted RBP7.15□□□□□ -1.26
CLIP1-205ENST00000514271 ZNF382Q96SR6 550 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 CDCA4Q9BXL8 241 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 SLA2Q9H6Q3 261 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 NDFIP2Q9NV92 336 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 THAP10Q9P2Z0 257 aaPredicted RBP7.15□□□□□ -1.26
CLIP1-205ENST00000514271 MMP17Q9ULZ9 603 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 TCF20Q9UGU0 1960 aaKnown RBP7.15□□□□□ -1.26
CLIP1-205ENST00000514271 PRAMEF25A6NGN4 478 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 LRRC14BA6NHZ5 514 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 BET1O15155 118 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 TBL1XO60907 577 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 TMCC2O75069 709 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 ASGR2P07307 311 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 RHOCP08134 193 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 PRDX3P30048 256 aaKnown RBP7.15□□□□□ -1.26
CLIP1-205ENST00000514271 UFM1P61960 85 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 CTBP1Q13363 440 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 STARD3Q14849 445 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 ZXDCQ2QGD7 858 aaPredicted RBP7.15□□□□□ -1.26
CLIP1-205ENST00000514271 PROX2Q3B8N5 592 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 LDLRAP1Q5SW96 308 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 ZNF470Q6ECI4 717 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 DESI1Q6ICB0 168 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 ZNF770Q6IQ21 691 aaPredicted RBP7.15□□□□□ -1.26
CLIP1-205ENST00000514271 METTL2BQ6P1Q9 378 aaKnown RBP7.15□□□□□ -1.26
CLIP1-205ENST00000514271 HEATR4Q86WZ0 1026 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 SIX5Q8N196 739 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 TMCO5AQ8N6Q1 288 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 OR5K1Q8NHB7 308 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 FAM174AQ8TBP5 190 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 BTN2A2Q8WVV5 523 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 KCNA7Q96RP8 456 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 RBM4BQ9BQ04 359 aaKnown RBP7.15□□□□□ -1.26
CLIP1-205ENST00000514271 CCDC32Q9BV29 185 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 RBM4Q9BWF3 364 aaKnown RBP7.15□□□□□ -1.26
CLIP1-205ENST00000514271 C3orf14Q9HBI5 128 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 CCDC177Q9NQR7 707 aaPredicted RBP7.15□□□□□ -1.26
CLIP1-205ENST00000514271 ADA2Q9NZK5 511 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 VAPAQ9P0L0 249 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 ERVK-18Q9QC07 812 aa7.15□□□□□ -1.26
CLIP1-205ENST00000514271 OR12D3Q9UGF7 316 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms