RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 BTBD3Q9Y2F9 522 aa14.35□□□□□ -0.11
VCAN-211ENST00000513984 OR52A4PA6NMU1 304 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 GABRR3A8MPY1 467 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 H0Y8X5 98 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 SEMA3DO95025 777 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 APBB3O95704 486 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 MRPS35P82673 323 aaKnown RBP14.34□□□□□ -0.11
VCAN-211ENST00000513984 FOLH1Q04609 750 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 ABHD18Q0P651 414 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 MAP7Q14244 749 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 RPE65Q16518 533 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 CPTPQ5TA50 214 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 GCNT7Q6ZNI0 430 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 GPR155Q7Z3F1 870 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 PHACTR4Q8IZ21 702 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 WDR48Q8TAF3 677 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 FAM120BQ96EK7 910 aaKnown RBP14.34□□□□□ -0.11
VCAN-211ENST00000513984 PANX1Q96RD7 426 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 MYNNQ9NPC7 610 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 PRDM8Q9NQV8 689 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 RAB26Q9ULW5 256 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 EXO1Q9UQ84 846 aaKnown RBP14.34□□□□□ -0.11
VCAN-211ENST00000513984 CA5BQ9Y2D0 317 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 HEBP2Q9Y5Z4 205 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 YY2O15391 372 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 DENRO43583 198 aaKnown RBP14.34□□□□□ -0.11
VCAN-211ENST00000513984 GMNNO75496 209 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 KLHL18O94889 574 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 SCELO95171 688 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 TBX6O95947 436 aaPredicted RBP14.34□□□□□ -0.11
VCAN-211ENST00000513984 IGLV3-19P01714 112 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 SRFP11831 508 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 CD72P21854 359 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 LRRC74AQ0VAA2 488 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 MED21Q13503 144 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 PDE7AQ13946 482 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 RBBP5Q15291 538 aaKnown RBP14.34□□□□□ -0.11
VCAN-211ENST00000513984 TPRG1LQ5T0D9 272 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 ANXA8L1Q5VT79 327 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 ANKRD26P1Q6NSI1 321 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 ENPP7Q6UWV6 458 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 WASH2PQ6VEQ5 465 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 SLC9B2Q86UD5 537 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 C10orf111Q8N326 155 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 ANKRD53Q8N9V6 530 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 OR52E1Q8NGJ3 308 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 HMGB4Q8WW32 186 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 PHF12Q96QT6 1004 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 GAS2L1Q99501 681 aaPredicted RBP14.34□□□□□ -0.11
VCAN-211ENST00000513984 MS4A8Q9BY19 250 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 REEP4Q9H6H4 257 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 COQ10BQ9H8M1 238 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 EBF1Q9UH73 591 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 ICKQ9UPZ9 632 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 PCDHB11Q9Y5F2 797 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 GMEB1Q9Y692 573 aa14.34□□□□□ -0.11
VCAN-211ENST00000513984 ANKDD1BA6NHY2 528 aa14.33□□□□□ -0.12
VCAN-211ENST00000513984 H7BY64 318 aa14.33□□□□□ -0.12
VCAN-211ENST00000513984 SAP18O00422 153 aaKnown RBP14.33□□□□□ -0.12
VCAN-211ENST00000513984 CXCR6O00574 342 aa14.33□□□□□ -0.12
VCAN-211ENST00000513984 TNFRSF10CO14798 259 aa14.33□□□□□ -0.12
VCAN-211ENST00000513984 GSTA4O15217 222 aa14.33□□□□□ -0.12
VCAN-211ENST00000513984 EPN2O95208 641 aa14.33□□□□□ -0.12
VCAN-211ENST00000513984 SEMA4FO95754 770 aa14.33□□□□□ -0.12
VCAN-211ENST00000513984 HTR1BP28222 390 aa14.33□□□□□ -0.12
VCAN-211ENST00000513984 RPL3P39023 403 aaKnown RBP14.33□□□□□ -0.12
VCAN-211ENST00000513984 YPEL5P62699 121 aa14.33□□□□□ -0.12
VCAN-211ENST00000513984 PRDX1Q06830 199 aaKnown RBP14.33□□□□□ -0.12
VCAN-211ENST00000513984 KRT33BQ14525 404 aa14.33□□□□□ -0.12
VCAN-211ENST00000513984 TMEM31Q5JXX7 168 aa14.33□□□□□ -0.12
VCAN-211ENST00000513984 FAM71E1Q6IPT2 247 aa14.33□□□□□ -0.12
VCAN-211ENST00000513984 ABRAXAS1Q6UWZ7 409 aa14.33□□□□□ -0.12
VCAN-211ENST00000513984 SERPINA11Q86U17 422 aa14.33□□□□□ -0.12
VCAN-211ENST00000513984 CLECL1Q8IZS7 167 aa14.33□□□□□ -0.12
VCAN-211ENST00000513984 VPS37AQ8NEZ2 397 aa14.33□□□□□ -0.12
VCAN-211ENST00000513984 OR2A1Q8NGT9 310 aa14.33□□□□□ -0.12
VCAN-211ENST00000513984 C16orf78Q8WTQ4 265 aa14.33□□□□□ -0.12
VCAN-211ENST00000513984 FIG4Q92562 907 aa14.33□□□□□ -0.12
VCAN-211ENST00000513984 CENPNQ96H22 339 aaPredicted RBP14.33□□□□□ -0.12
VCAN-211ENST00000513984 REXO5Q96IC2 774 aaKnown RBP14.33□□□□□ -0.12
VCAN-211ENST00000513984 ZNF597Q96LX8 424 aa14.33□□□□□ -0.12
VCAN-211ENST00000513984 PRAP1Q96NZ9 151 aa14.33□□□□□ -0.12
VCAN-211ENST00000513984 CIB1Q99828 191 aa14.33□□□□□ -0.12
VCAN-211ENST00000513984 TBCDQ9BTW9 1192 aa14.33□□□□□ -0.12
VCAN-211ENST00000513984 BHLHE41Q9C0J9 482 aaPredicted RBP14.33□□□□□ -0.12
VCAN-211ENST00000513984 XKR8Q9H6D3 395 aa14.33□□□□□ -0.12
VCAN-211ENST00000513984 KIR3DX1Q9H7L2 352 aa14.33□□□□□ -0.12
VCAN-211ENST00000513984 SCHIP1Q9P0W5 487 aaPredicted RBP14.33□□□□□ -0.12
VCAN-211ENST00000513984 ERVK-11Q9UQG0 969 aa14.33□□□□□ -0.12
VCAN-211ENST00000513984 MAGEA13PA6NCF6 341 aa14.32□□□□□ -0.12
VCAN-211ENST00000513984 EVPLLA8MZ36 301 aa14.32□□□□□ -0.12
VCAN-211ENST00000513984 RNASET2O00584 256 aaKnown RBP14.32□□□□□ -0.12
VCAN-211ENST00000513984 PRICKLE3O43900 615 aaPredicted RBP14.32□□□□□ -0.12
VCAN-211ENST00000513984 KDM1AO60341 852 aa14.32□□□□□ -0.12
VCAN-211ENST00000513984 RETP07949 1114 aa14.32□□□□□ -0.12
VCAN-211ENST00000513984 FURINP09958 794 aa14.32□□□□□ -0.12
VCAN-211ENST00000513984 ZCCHC18P0CG32 403 aa14.32□□□□□ -0.12
VCAN-211ENST00000513984 GPX2P18283 190 aa14.32□□□□□ -0.12
VCAN-211ENST00000513984 AKT2P31751 481 aa14.32□□□□□ -0.12
VCAN-211ENST00000513984 CCT8P50990 548 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms