RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 CHP1Q99653 195 aa10.26□□□□□ -0.77
DDX41-216ENST00000513562 SLC6A16Q9GZN6 736 aa10.26□□□□□ -0.77
DDX41-216ENST00000513562 P2RY12Q9H244 342 aa10.26□□□□□ -0.77
DDX41-216ENST00000513562 NHEJ1Q9H9Q4 299 aaPredicted RBP10.26□□□□□ -0.77
DDX41-216ENST00000513562 MAGEB17A8MXT2 336 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 SGK494L7N484 410 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 PEX1O43933 1283 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 STATHP02808 62 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 HEXAP06865 529 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 INHBBP09529 407 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 IL1RNP18510 177 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 ATP5DP30049 168 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 ADSLP30566 484 aaPredicted RBP10.25□□□□□ -0.77
DDX41-216ENST00000513562 TTPAP49638 278 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 MLF1P58340 268 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 ABATP80404 500 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 MPP1Q00013 466 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 CDH17Q12864 832 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 GBX1Q14549 363 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 ANKRD20A4Q4UJ75 823 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 TMEM198Q66K66 360 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 C11orf63Q6NUN7 778 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 TMEM214Q6NUQ4 689 aaKnown RBP10.25□□□□□ -0.77
DDX41-216ENST00000513562 CLEC9AQ6UXN8 241 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 VN1R4Q7Z5H5 301 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 ADCK2Q7Z695 626 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 LINC00523Q86TU6 105 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 PLD3Q8IV08 490 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 ARMC10Q8N2F6 343 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 FAM71DQ8N9W8 422 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 OR52N2Q8NGI0 321 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 OR52K1Q8NGK4 314 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 OR5M3Q8NGP4 307 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 SPATA3Q8NHX4 192 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 TSLPQ969D9 159 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 CCDC42Q96M95 316 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 OR1F2PQ96R84 312 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 OSBPL8Q9BZF1 889 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 LANCL2Q9NS86 450 aa10.25□□□□□ -0.77
DDX41-216ENST00000513562 MARCH4Q9P2E8 410 aaPredicted RBP10.25□□□□□ -0.77
DDX41-216ENST00000513562 PSMD3O43242 534 aa10.24□□□□□ -0.77
DDX41-216ENST00000513562 KIF5CO60282 957 aa10.24□□□□□ -0.77
DDX41-216ENST00000513562 CDC123O75794 336 aaPredicted RBP10.24□□□□□ -0.77
DDX41-216ENST00000513562 PDE9AO76083 593 aa10.24□□□□□ -0.77
DDX41-216ENST00000513562 MBD3O95983 291 aa10.24□□□□□ -0.77
DDX41-216ENST00000513562 IL10P22301 178 aa10.24□□□□□ -0.77
DDX41-216ENST00000513562 RPS3P23396 243 aaKnown RBP eCLIP10.24□□□□□ -0.77
DDX41-216ENST00000513562 ACVR2AP27037 513 aa10.24□□□□□ -0.77
DDX41-216ENST00000513562 HOXC12P31275 282 aa10.24□□□□□ -0.77
DDX41-216ENST00000513562 CTNNA1P35221 906 aaKnown RBP10.24□□□□□ -0.77
DDX41-216ENST00000513562 HSD17B2P37059 387 aa10.24□□□□□ -0.77
DDX41-216ENST00000513562 KIR2DL3P43628 341 aa10.24□□□□□ -0.77
DDX41-216ENST00000513562 ZFP36L2P47974 494 aaKnown RBP10.24□□□□□ -0.77
DDX41-216ENST00000513562 NR0B1P51843 470 aaKnown RBP10.24□□□□□ -0.77
DDX41-216ENST00000513562 PNLIPRP1P54315 467 aa10.24□□□□□ -0.77
DDX41-216ENST00000513562 OR4D2P58180 307 aa10.24□□□□□ -0.77
DDX41-216ENST00000513562 TPM4P67936 248 aa10.24□□□□□ -0.77
DDX41-216ENST00000513562 PRAMEP78395 509 aa10.24□□□□□ -0.77
DDX41-216ENST00000513562 TSTA3Q13630 321 aaPredicted RBP10.24□□□□□ -0.77
DDX41-216ENST00000513562 DEFB113Q30KQ7 82 aa10.24□□□□□ -0.77
DDX41-216ENST00000513562 LUZP1Q86V48 1076 aa10.24□□□□□ -0.77
DDX41-216ENST00000513562 LRRC6Q86X45 466 aa10.24□□□□□ -0.77
DDX41-216ENST00000513562 PDSS2Q86YH6 399 aa10.24□□□□□ -0.77
DDX41-216ENST00000513562 GOT1L1Q8NHS2 421 aaPredicted RBP10.24□□□□□ -0.77
DDX41-216ENST00000513562 PEX13Q92968 403 aa10.24□□□□□ -0.77
DDX41-216ENST00000513562 PWWP2AQ96N64 755 aa10.24□□□□□ -0.77
DDX41-216ENST00000513562 EBNA1BP2Q99848 306 aaKnown RBP10.24□□□□□ -0.77
DDX41-216ENST00000513562 TTYH2Q9BSA4 534 aa10.24□□□□□ -0.77
DDX41-216ENST00000513562 RBCK1Q9BYM8 510 aa10.24□□□□□ -0.77
DDX41-216ENST00000513562 PNPLA3Q9NST1 481 aa10.24□□□□□ -0.77
DDX41-216ENST00000513562 CATSPERZQ9NTU4 200 aa10.24□□□□□ -0.77
DDX41-216ENST00000513562 ABHD10Q9NUJ1 306 aa10.24□□□□□ -0.77
DDX41-216ENST00000513562 ZNHIT6Q9NWK9 470 aaKnown RBP10.24□□□□□ -0.77
DDX41-216ENST00000513562 CRIM1Q9NZV1 1036 aa10.24□□□□□ -0.77
DDX41-216ENST00000513562 IFNKQ9P0W0 207 aa10.24□□□□□ -0.77
DDX41-216ENST00000513562 TCAF1Q9Y4C2 921 aa10.24□□□□□ -0.77
DDX41-216ENST00000513562 HRNRQ86YZ3 2850 aaPredicted RBP10.24□□□□□ -0.77
DDX41-216ENST00000513562 ABCA4P78363 2273 aa10.24□□□□□ -0.77
DDX41-216ENST00000513562 HCFC1P51610 2035 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 KCNE1BA0A087WTH5 132 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 A0A0G2JNJ9 132 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 FIGNL2A6NMB9 653 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 A6NNC1 897 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 ZNF839A8K0R7 811 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 E7ENX8 843 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 FCHO1O14526 889 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 RDH16O75452 317 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 PSIP1O75475 530 aaKnown RBP10.23□□□□□ -0.77
DDX41-216ENST00000513562 ATE1O95260 518 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 SLC16A8O95907 504 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 RAF1P04049 648 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 GLI4P10075 376 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 ADRA1DP25100 572 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 PEX19P40855 299 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 GDF10P55107 478 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 GPR85P60893 370 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 TAP2Q03519 686 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 SNTB1Q13884 538 aaKnown RBP10.23□□□□□ -0.77
DDX41-216ENST00000513562 SLC25A35Q3KQZ1 300 aa10.23□□□□□ -0.77
DDX41-216ENST00000513562 GXYLT1Q4G148 440 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms