RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 OR1F2PQ96R84 312 aa11.87□□□□□ -0.51
VEGFA-216ENST00000512683 UTP23Q9BRU9 249 aaKnown RBP11.87□□□□□ -0.51
VEGFA-216ENST00000512683 SARGQ9BW04 601 aa11.87□□□□□ -0.51
VEGFA-216ENST00000512683 ANKHQ9HCJ1 492 aa11.87□□□□□ -0.51
VEGFA-216ENST00000512683 GPAMQ9HCL2 828 aa11.87□□□□□ -0.51
VEGFA-216ENST00000512683 CCDC177Q9NQR7 707 aaPredicted RBP11.87□□□□□ -0.51
VEGFA-216ENST00000512683 FBXO6Q9NRD1 293 aaPredicted RBP11.87□□□□□ -0.51
VEGFA-216ENST00000512683 TRMT1Q9NXH9 659 aaKnown RBP11.87□□□□□ -0.51
VEGFA-216ENST00000512683 HAT1O14929 419 aa11.86□□□□□ -0.51
VEGFA-216ENST00000512683 SLC16A5O15375 505 aa11.86□□□□□ -0.51
VEGFA-216ENST00000512683 ZSCAN12O43309 604 aa11.86□□□□□ -0.51
VEGFA-216ENST00000512683 C8GP07360 202 aa11.86□□□□□ -0.51
VEGFA-216ENST00000512683 SLC1A2P43004 574 aa11.86□□□□□ -0.51
VEGFA-216ENST00000512683 MPP1Q00013 466 aa11.86□□□□□ -0.51
VEGFA-216ENST00000512683 BTBD16Q32M84 506 aa11.86□□□□□ -0.51
VEGFA-216ENST00000512683 MINDY4Q4G0A6 757 aa11.86□□□□□ -0.51
VEGFA-216ENST00000512683 ANKRD37Q7Z713 158 aa11.86□□□□□ -0.51
VEGFA-216ENST00000512683 SPPL2CQ8IUH8 684 aa11.86□□□□□ -0.51
VEGFA-216ENST00000512683 PALM2Q8IXS6 379 aa11.86□□□□□ -0.51
VEGFA-216ENST00000512683 PPIL6Q8IXY8 311 aa11.86□□□□□ -0.51
VEGFA-216ENST00000512683 OR9A4Q8NGU2 314 aa11.86□□□□□ -0.51
VEGFA-216ENST00000512683 GRK7Q8WTQ7 553 aa11.86□□□□□ -0.51
VEGFA-216ENST00000512683 GPR137Q96N19 417 aa11.86□□□□□ -0.51
VEGFA-216ENST00000512683 LPAR4Q99677 370 aa11.86□□□□□ -0.51
VEGFA-216ENST00000512683 KCNK13Q9HB14 408 aa11.86□□□□□ -0.51
VEGFA-216ENST00000512683 MAD1L1Q9Y6D9 718 aa11.86□□□□□ -0.51
VEGFA-216ENST00000512683 CRYBG3Q68DQ2 2970 aa11.86□□□□□ -0.51
VEGFA-216ENST00000512683 CSMD1Q96PZ7 3565 aa11.86□□□□□ -0.51
VEGFA-216ENST00000512683 USP27XA6NNY8 438 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 MAGEB17A8MXT2 336 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 P2RX6O15547 441 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 HAUS5O94927 633 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 SYF2O95926 243 aaKnown RBP11.85□□□□□ -0.51
VEGFA-216ENST00000512683 CELA2AP08217 269 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 IVDP26440 423 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 IMPA1P29218 277 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 EEF1DP29692 281 aaKnown RBP11.85□□□□□ -0.51
VEGFA-216ENST00000512683 SSTR2P30874 369 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 CD96P40200 585 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 XCR1P46094 333 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 RGS4P49798 205 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 TAS2R50P59544 299 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 CSNK1G2P78368 415 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 MAT1AQ00266 395 aaKnown RBP11.85□□□□□ -0.51
VEGFA-216ENST00000512683 TIAL1Q01085 375 aaKnown RBP eCLIP11.85□□□□□ -0.51
VEGFA-216ENST00000512683 ACTN3Q08043 901 aaPredicted RBP11.85□□□□□ -0.51
VEGFA-216ENST00000512683 PWP1Q13610 501 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 CUL1Q13616 776 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 TUBA3CQ13748 450 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 HERC3Q15034 1050 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 NSDHLQ15738 373 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 SYT16Q17RD7 645 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 MSS51Q4VC12 460 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 TUBA3EQ6PEY2 450 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 UBE2R2Q712K3 238 aaPredicted RBP11.85□□□□□ -0.51
VEGFA-216ENST00000512683 VN1R4Q7Z5H5 301 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 STRA8Q7Z7C7 330 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 C17orf64Q86WR6 236 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 TBC1D19Q8N5T2 526 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 PPFIBP2Q8ND30 876 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 MDS2Q8NDY4 140 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 SLC13A3Q8WWT9 602 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 SLCO2A1Q92959 643 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 SCMH1Q96GD3 660 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 MAGED4Q96JG8 741 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 SPOCK3Q9BQ16 436 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 HAUS8Q9BT25 410 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 DDX47Q9H0S4 455 aaKnown RBP11.85□□□□□ -0.51
VEGFA-216ENST00000512683 SYNPO2LQ9H987 977 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 PARVBQ9HBI1 364 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 C20orf96Q9NUD7 363 aaPredicted RBP11.85□□□□□ -0.51
VEGFA-216ENST00000512683 FBXO5Q9UKT4 447 aa11.85□□□□□ -0.51
VEGFA-216ENST00000512683 GOLGA6L10A0A0M3HER8 536 aa11.84□□□□□ -0.51
VEGFA-216ENST00000512683 DNALI1O14645 258 aaPredicted RBP11.84□□□□□ -0.51
VEGFA-216ENST00000512683 FFAR3O14843 346 aa11.84□□□□□ -0.51
VEGFA-216ENST00000512683 GPR42O15529 346 aa11.84□□□□□ -0.51
VEGFA-216ENST00000512683 BANF1O75531 89 aa11.84□□□□□ -0.51
VEGFA-216ENST00000512683 SEC24DO94855 1032 aaPredicted RBP11.84□□□□□ -0.51
VEGFA-216ENST00000512683 HIST1H2AGP0C0S8 130 aaPredicted RBP11.84□□□□□ -0.51
VEGFA-216ENST00000512683 SLC35G6P0C7Q6 338 aa11.84□□□□□ -0.51
VEGFA-216ENST00000512683 HIST1H2ADP20671 130 aa11.84□□□□□ -0.51
VEGFA-216ENST00000512683 JAK1P23458 1154 aa11.84□□□□□ -0.51
VEGFA-216ENST00000512683 RIPPLY3P57055 190 aa11.84□□□□□ -0.51
VEGFA-216ENST00000512683 ALDH6A1Q02252 535 aaKnown RBP11.84□□□□□ -0.51
VEGFA-216ENST00000512683 SP140Q13342 867 aa11.84□□□□□ -0.51
VEGFA-216ENST00000512683 PPP1R7Q15435 360 aa11.84□□□□□ -0.51
VEGFA-216ENST00000512683 OR1C1Q15619 314 aa11.84□□□□□ -0.51
VEGFA-216ENST00000512683 HSP90AA5PQ58FG0 334 aa11.84□□□□□ -0.51
VEGFA-216ENST00000512683 MFSD4BQ5TF39 518 aa11.84□□□□□ -0.51
VEGFA-216ENST00000512683 SLC25A25Q6KCM7 469 aa11.84□□□□□ -0.51
VEGFA-216ENST00000512683 CAPN13Q6MZZ7 669 aaPredicted RBP11.84□□□□□ -0.51
VEGFA-216ENST00000512683 ASPGQ86U10 573 aa11.84□□□□□ -0.51
VEGFA-216ENST00000512683 IGDCC3Q8IVU1 814 aa11.84□□□□□ -0.51
VEGFA-216ENST00000512683 BEST3Q8N1M1 668 aa11.84□□□□□ -0.51
VEGFA-216ENST00000512683 AFAP1L2Q8N4X5 818 aa11.84□□□□□ -0.51
VEGFA-216ENST00000512683 POGLUT1Q8NBL1 392 aa11.84□□□□□ -0.51
VEGFA-216ENST00000512683 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.84□□□□□ -0.51
VEGFA-216ENST00000512683 ABHD11Q8NFV4 315 aa11.84□□□□□ -0.51
VEGFA-216ENST00000512683 CD200R1Q8TD46 325 aa11.84□□□□□ -0.51
VEGFA-216ENST00000512683 ADAMTS18Q8TE60 1221 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms