RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 SGPP1Q9BX95 441 aa13.89□□□□□ -0.19
CCHCR1-229ENST00000512418 ABI3Q9P2A4 366 aa13.89□□□□□ -0.19
CCHCR1-229ENST00000512418 CREBBPQ92793 2442 aa13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 IGHV3-20A0A0C4DH32 117 aa13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 PABPN1LA6NDY0 278 aaKnown RBP13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 SGK494L7N484 410 aa13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 RDH16O75452 317 aa13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 HIST1H2AGP0C0S8 130 aaPredicted RBP13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 CDH1P12830 882 aa13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 HIST1H2ADP20671 130 aa13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 GABRB3P28472 473 aa13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 CDKN2DP55273 166 aa13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 DHX9Q08211 1270 aaKnown RBP13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 PHKG1Q16816 387 aa13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 RBM20Q5T481 1227 aaKnown RBP13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 CAPN13Q6MZZ7 669 aaPredicted RBP13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 GFRALQ6UXV0 394 aa13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 ANKRD37Q7Z713 158 aa13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 GALNT7Q86SF2 657 aa13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 SLC26A11Q86WA9 606 aa13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 PDSS2Q86YH6 399 aa13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 TICAM1Q8IUC6 712 aa13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 SHISA5Q8N114 240 aa13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 KCT2Q8NC54 265 aa13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 DNAJB8Q8NHS0 232 aa13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 ALKBH8Q96BT7 664 aaKnown RBP13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 HIST1H2AHQ96KK5 128 aa13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 HIST1H2AJQ99878 128 aa13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 HAUS8Q9BT25 410 aa13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 H2AFJQ9BTM1 129 aa13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 ASIC3Q9UHC3 531 aa13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 SLC22A7Q9Y694 548 aa13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 SCN2AQ99250 2005 aa13.88□□□□□ -0.19
CCHCR1-229ENST00000512418 A8MUI8 341 aa13.87□□□□□ -0.19
CCHCR1-229ENST00000512418 CES2O00748 559 aa13.87□□□□□ -0.19
CCHCR1-229ENST00000512418 DNALI1O14645 258 aaPredicted RBP13.87□□□□□ -0.19
CCHCR1-229ENST00000512418 LCMT2O60294 686 aaKnown RBP13.87□□□□□ -0.19
CCHCR1-229ENST00000512418 AHSGP02765 367 aa13.87□□□□□ -0.19
CCHCR1-229ENST00000512418 NPPBP16860 134 aa13.87□□□□□ -0.19
CCHCR1-229ENST00000512418 IL10P22301 178 aa13.87□□□□□ -0.19
CCHCR1-229ENST00000512418 AP1S2P56377 157 aa13.87□□□□□ -0.19
CCHCR1-229ENST00000512418 IL2P60568 153 aa13.87□□□□□ -0.19
CCHCR1-229ENST00000512418 HERC3Q15034 1050 aa13.87□□□□□ -0.19
CCHCR1-229ENST00000512418 EXT1Q16394 746 aa13.87□□□□□ -0.19
CCHCR1-229ENST00000512418 ACER2Q5QJU3 275 aa13.87□□□□□ -0.19
CCHCR1-229ENST00000512418 H3F3CQ6NXT2 135 aa13.87□□□□□ -0.19
CCHCR1-229ENST00000512418 AMER2Q8N7J2 671 aa13.87□□□□□ -0.19
CCHCR1-229ENST00000512418 MFSD9Q8NBP5 474 aa13.87□□□□□ -0.19
CCHCR1-229ENST00000512418 ABHD11Q8NFV4 315 aa13.87□□□□□ -0.19
CCHCR1-229ENST00000512418 CERS2Q96G23 380 aa13.87□□□□□ -0.19
CCHCR1-229ENST00000512418 ZNF354BQ96LW1 612 aa13.87□□□□□ -0.19
CCHCR1-229ENST00000512418 OR1F2PQ96R84 312 aa13.87□□□□□ -0.19
CCHCR1-229ENST00000512418 SARGQ9BW04 601 aa13.87□□□□□ -0.19
CCHCR1-229ENST00000512418 ARL15Q9NXU5 204 aa13.87□□□□□ -0.19
CCHCR1-229ENST00000512418 CORO1CQ9ULV4 474 aaPredicted RBP13.87□□□□□ -0.19
CCHCR1-229ENST00000512418 ENTPD4Q9Y227 616 aa13.87□□□□□ -0.19
CCHCR1-229ENST00000512418 NAALAD2Q9Y3Q0 740 aa13.87□□□□□ -0.19
CCHCR1-229ENST00000512418 OR2W5A6NFC9 320 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 ENO4A6NNW6 628 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 NDUFS4O43181 175 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 BANF1O75531 89 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 UNC5CO95185 931 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 TSPAN12O95859 305 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 MST1P26927 711 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 CCR8P51685 355 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 SKP1P63208 163 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 PDAP1Q13442 181 aaKnown RBP13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 ABRAXAS2Q15018 415 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 NSDHLQ15738 373 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 MSS51Q4VC12 460 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 DUPD1Q68J44 220 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 TMEM207Q6UWW9 146 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 BEST3Q8N1M1 668 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 SLC35F6Q8N357 371 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 OR4K1Q8NGD4 311 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 OR56A3Q8NH54 315 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 M1APQ8TC57 530 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 SLCO2A1Q92959 643 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 PYCR2Q96C36 320 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 SNF8Q96H20 258 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 PEX11GQ96HA9 241 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 RBCK1Q9BYM8 510 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 TRIM54Q9BYV2 358 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 KCNK13Q9HB14 408 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 MMP25Q9NPA2 562 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 COPG2Q9UBF2 871 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 SEC14L3Q9UDX4 400 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 SNX12Q9UMY4 172 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 PCDHGB6Q9Y5F9 930 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 SCN3AQ9NY46 2000 aa13.86□□□□□ -0.19
CCHCR1-229ENST00000512418 TRGV8A0A0C4DH27 118 aa13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 ZNF860A6NHJ4 632 aa13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 HNRNPRO43390 633 aaKnown RBP13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 OR1F1O43749 312 aa13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 CDC123O75794 336 aaPredicted RBP13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 ENO2P09104 434 aaPredicted RBP13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 MEF2AQ02078 507 aaPredicted RBP13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 RHAGQ02094 409 aa13.85□□□□□ -0.19
CCHCR1-229ENST00000512418 RBPJQ06330 500 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms