RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 ROPN1Q9HAT0 212 aaPredicted RBP16.43■□□□□ 0.22
CLDND1-221ENST00000510541 C14orf105Q9NVL8 296 aa16.43■□□□□ 0.22
CLDND1-221ENST00000510541 IRAK4Q9NWZ3 460 aa16.43■□□□□ 0.22
CLDND1-221ENST00000510541 PSD3Q9NYI0 1048 aa16.43■□□□□ 0.22
CLDND1-221ENST00000510541 GPN3Q9UHW5 284 aaPredicted RBP16.43■□□□□ 0.22
CLDND1-221ENST00000510541 ADGRE2Q9UHX3 823 aa16.43■□□□□ 0.22
CLDND1-221ENST00000510541 CLGNO14967 610 aa16.42■□□□□ 0.22
CLDND1-221ENST00000510541 NKX2-8O15522 239 aa16.42■□□□□ 0.22
CLDND1-221ENST00000510541 FOXS1O43638 330 aa16.42■□□□□ 0.22
CLDND1-221ENST00000510541 KATNA1O75449 491 aa16.42■□□□□ 0.22
CLDND1-221ENST00000510541 SMIM10L1P0DMW3 83 aa16.42■□□□□ 0.22
CLDND1-221ENST00000510541 ALAS2P22557 587 aa16.42■□□□□ 0.22
CLDND1-221ENST00000510541 SOX8P57073 446 aa16.42■□□□□ 0.22
CLDND1-221ENST00000510541 NAA20P61599 178 aa16.42■□□□□ 0.22
CLDND1-221ENST00000510541 IRF9Q00978 393 aa16.42■□□□□ 0.22
CLDND1-221ENST00000510541 NKG7Q16617 165 aa16.42■□□□□ 0.22
CLDND1-221ENST00000510541 TBR1Q16650 682 aa16.42■□□□□ 0.22
CLDND1-221ENST00000510541 ADPRMQ3LIE5 342 aa16.42■□□□□ 0.22
CLDND1-221ENST00000510541 PAGE2BQ5JRK9 111 aa16.42■□□□□ 0.22
CLDND1-221ENST00000510541 CATSPEREQ5SY80 951 aa16.42■□□□□ 0.22
CLDND1-221ENST00000510541 SH2D5Q6ZV89 423 aa16.42■□□□□ 0.22
CLDND1-221ENST00000510541 RAB43Q86YS6 212 aa16.42■□□□□ 0.22
CLDND1-221ENST00000510541 TMEM102Q8N9M5 508 aaPredicted RBP16.42■□□□□ 0.22
CLDND1-221ENST00000510541 SMIM10Q96HG1 83 aa16.42■□□□□ 0.22
CLDND1-221ENST00000510541 VPS50Q96JG6 964 aa16.42■□□□□ 0.22
CLDND1-221ENST00000510541 TMEM109Q9BVC6 243 aa16.42■□□□□ 0.22
CLDND1-221ENST00000510541 SLC6A16Q9GZN6 736 aa16.42■□□□□ 0.22
CLDND1-221ENST00000510541 MKKSQ9NPJ1 570 aaPredicted RBP16.42■□□□□ 0.22
CLDND1-221ENST00000510541 GEMIN8Q9NWZ8 242 aaKnown RBP16.42■□□□□ 0.22
CLDND1-221ENST00000510541 ZNF282Q9UDV7 671 aaPredicted RBP16.42■□□□□ 0.22
CLDND1-221ENST00000510541 DCDC2Q9UHG0 476 aa16.42■□□□□ 0.22
CLDND1-221ENST00000510541 PPT2Q9UMR5 302 aa16.42■□□□□ 0.22
CLDND1-221ENST00000510541 KCNMB2Q9Y691 235 aa16.42■□□□□ 0.22
CLDND1-221ENST00000510541 CLEC3AO75596 197 aa16.41■□□□□ 0.22
CLDND1-221ENST00000510541 EPORP19235 508 aa16.41■□□□□ 0.22
CLDND1-221ENST00000510541 GDF5P43026 501 aa16.41■□□□□ 0.22
CLDND1-221ENST00000510541 RGS1Q08116 209 aa16.41■□□□□ 0.22
CLDND1-221ENST00000510541 HKDC1Q2TB90 917 aa16.41■□□□□ 0.22
CLDND1-221ENST00000510541 LINC00303Q3SY05 128 aa16.41■□□□□ 0.22
CLDND1-221ENST00000510541 LIPJQ5W064 366 aa16.41■□□□□ 0.22
CLDND1-221ENST00000510541 PCSK4Q6UW60 755 aa16.41■□□□□ 0.22
CLDND1-221ENST00000510541 TMIGD1Q6UXZ0 262 aa16.41■□□□□ 0.22
CLDND1-221ENST00000510541 LAS2Q8IYD9 372 aa16.41■□□□□ 0.22
CLDND1-221ENST00000510541 PLD6Q8N2A8 252 aaKnown RBP16.41■□□□□ 0.22
CLDND1-221ENST00000510541 CREB3L4Q8TEY5 395 aa16.41■□□□□ 0.22
CLDND1-221ENST00000510541 MRRFQ96E11 262 aaKnown RBP16.41■□□□□ 0.22
CLDND1-221ENST00000510541 MAGEB10Q96LZ2 347 aaPredicted RBP16.41■□□□□ 0.22
CLDND1-221ENST00000510541 TSNARE1Q96NA8 513 aa16.41■□□□□ 0.22
CLDND1-221ENST00000510541 SPSB2Q99619 263 aa16.41■□□□□ 0.22
CLDND1-221ENST00000510541 VPS11Q9H270 941 aa16.41■□□□□ 0.22
CLDND1-221ENST00000510541 SEMA3GQ9NS98 782 aa16.41■□□□□ 0.22
CLDND1-221ENST00000510541 OPTCQ9UBM4 332 aa16.41■□□□□ 0.22
CLDND1-221ENST00000510541 NCF1BA6NI72 391 aaPredicted RBP16.4■□□□□ 0.22
CLDND1-221ENST00000510541 NCF1CA8MVU1 366 aaPredicted RBP16.4■□□□□ 0.22
CLDND1-221ENST00000510541 SUPT3HB4E1H0 165 aa16.4■□□□□ 0.22
CLDND1-221ENST00000510541 UBXN8O00124 270 aa16.4■□□□□ 0.22
CLDND1-221ENST00000510541 P2RX6O15547 441 aa16.4■□□□□ 0.22
CLDND1-221ENST00000510541 OR1F1O43749 312 aa16.4■□□□□ 0.22
CLDND1-221ENST00000510541 KLHL41O60662 606 aa16.4■□□□□ 0.22
CLDND1-221ENST00000510541 SUPT3HO75486 399 aa16.4■□□□□ 0.22
CLDND1-221ENST00000510541 MED26O95402 600 aa16.4■□□□□ 0.22
CLDND1-221ENST00000510541 EIF2S1P05198 315 aaKnown RBP16.4■□□□□ 0.22
CLDND1-221ENST00000510541 NCF1P14598 390 aaPredicted RBP16.4■□□□□ 0.22
CLDND1-221ENST00000510541 EPB42P16452 691 aa16.4■□□□□ 0.22
CLDND1-221ENST00000510541 MMP11P24347 488 aa16.4■□□□□ 0.22
CLDND1-221ENST00000510541 HSD17B3P37058 310 aa16.4■□□□□ 0.22
CLDND1-221ENST00000510541 HNF4AP41235 474 aa16.4■□□□□ 0.22
CLDND1-221ENST00000510541 FOLR3P41439 243 aa16.4■□□□□ 0.22
CLDND1-221ENST00000510541 CCR10P46092 362 aa16.4■□□□□ 0.22
CLDND1-221ENST00000510541 AVPR1BP47901 424 aa16.4■□□□□ 0.22
CLDND1-221ENST00000510541 HSPA7P48741 367 aa16.4■□□□□ 0.22
CLDND1-221ENST00000510541 TMPRSS11BQ86T26 416 aa16.4■□□□□ 0.22
CLDND1-221ENST00000510541 AMER3Q8N944 861 aa16.4■□□□□ 0.22
CLDND1-221ENST00000510541 ANKRD53Q8N9V6 530 aa16.4■□□□□ 0.22
CLDND1-221ENST00000510541 OR1F2PQ96R84 312 aa16.4■□□□□ 0.22
CLDND1-221ENST00000510541 NTMT1Q9BV86 223 aa16.4■□□□□ 0.22
CLDND1-221ENST00000510541 MKS1Q9NXB0 559 aa16.4■□□□□ 0.22
CLDND1-221ENST00000510541 PCDHGB7Q9Y5F8 929 aa16.4■□□□□ 0.22
CLDND1-221ENST00000510541 MRPS18BQ9Y676 258 aaKnown RBP16.4■□□□□ 0.22
CLDND1-221ENST00000510541 COL6A6A6NMZ7 2263 aa16.39■□□□□ 0.21
CLDND1-221ENST00000510541 KALRNO60229 2985 aa16.39■□□□□ 0.21
CLDND1-221ENST00000510541 SYNDIG1LA6NDD5 238 aa16.39■□□□□ 0.21
CLDND1-221ENST00000510541 E2F3O00716 465 aa16.39■□□□□ 0.21
CLDND1-221ENST00000510541 CNOT3O75175 753 aaKnown RBP16.39■□□□□ 0.21
CLDND1-221ENST00000510541 UMODP07911 640 aa16.39■□□□□ 0.21
CLDND1-221ENST00000510541 TSFMP43897 325 aaKnown RBP16.39■□□□□ 0.21
CLDND1-221ENST00000510541 RRADP55042 308 aa16.39■□□□□ 0.21
CLDND1-221ENST00000510541 STXBP1P61764 594 aaKnown RBP16.39■□□□□ 0.21
CLDND1-221ENST00000510541 OCA2Q04671 838 aa16.39■□□□□ 0.21
CLDND1-221ENST00000510541 IL10RAQ13651 578 aa16.39■□□□□ 0.21
CLDND1-221ENST00000510541 SLC9A5Q14940 896 aa16.39■□□□□ 0.21
CLDND1-221ENST00000510541 HIST2H2ACQ16777 129 aaPredicted RBP16.39■□□□□ 0.21
CLDND1-221ENST00000510541 HIST2H2AA3Q6FI13 130 aa16.39■□□□□ 0.21
CLDND1-221ENST00000510541 ABHD13Q7L211 337 aa16.39■□□□□ 0.21
CLDND1-221ENST00000510541 HPS6Q86YV9 775 aa16.39■□□□□ 0.21
CLDND1-221ENST00000510541 HOMEZQ8IX15 550 aa16.39■□□□□ 0.21
CLDND1-221ENST00000510541 GSPT2Q8IYD1 628 aaKnown RBP16.39■□□□□ 0.21
CLDND1-221ENST00000510541 L3MBTL4Q8NA19 623 aa16.39■□□□□ 0.21
CLDND1-221ENST00000510541 UBLCP1Q8WVY7 318 aaPredicted RBP16.39■□□□□ 0.21
CLDND1-221ENST00000510541 ALKBH8Q96BT7 664 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms