RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 HSPB3Q12988 150 aa14.4□□□□□ -0.1
USP38-202ENST00000510377 C5orf22Q49AR2 442 aa14.4□□□□□ -0.1
USP38-202ENST00000510377 XAF1Q6GPH4 301 aa14.4□□□□□ -0.1
USP38-202ENST00000510377 SCAMP4Q969E2 229 aa14.4□□□□□ -0.1
USP38-202ENST00000510377 TMCO6Q96DC7 493 aa14.4□□□□□ -0.1
USP38-202ENST00000510377 CMTM7Q96FZ5 175 aa14.4□□□□□ -0.1
USP38-202ENST00000510377 OR51B5Q9H339 312 aa14.4□□□□□ -0.1
USP38-202ENST00000510377 THG1LQ9NWX6 298 aaKnown RBP14.4□□□□□ -0.1
USP38-202ENST00000510377 TBC1D14Q9P2M4 693 aa14.4□□□□□ -0.1
USP38-202ENST00000510377 HCSTQ9UBK5 93 aa14.4□□□□□ -0.1
USP38-202ENST00000510377 TRPS1Q9UHF7 1281 aa14.4□□□□□ -0.1
USP38-202ENST00000510377 SDK1Q7Z5N4 2213 aa14.4□□□□□ -0.1
USP38-202ENST00000510377 EP400Q96L91 3159 aa14.4□□□□□ -0.1
USP38-202ENST00000510377 TRBC2A0A5B9 178 aa14.4□□□□□ -0.1
USP38-202ENST00000510377 CTDSP2O14595 271 aa14.4□□□□□ -0.1
USP38-202ENST00000510377 DYRK3O43781 588 aa14.4□□□□□ -0.1
USP38-202ENST00000510377 C6orf47O95873 294 aa14.4□□□□□ -0.1
USP38-202ENST00000510377 ETFAP13804 333 aa14.4□□□□□ -0.1
USP38-202ENST00000510377 PAX3P23760 479 aa14.4□□□□□ -0.1
USP38-202ENST00000510377 HOXD9P28356 352 aaPredicted RBP14.4□□□□□ -0.1
USP38-202ENST00000510377 FEN1P39748 380 aaKnown RBP14.4□□□□□ -0.1
USP38-202ENST00000510377 CSNK2BP67870 215 aa14.4□□□□□ -0.1
USP38-202ENST00000510377 IL18Q14116 193 aa14.4□□□□□ -0.1
USP38-202ENST00000510377 SETMARQ53H47 684 aaPredicted RBP14.4□□□□□ -0.1
USP38-202ENST00000510377 DNAJB8Q8NHS0 232 aa14.4□□□□□ -0.1
USP38-202ENST00000510377 TMEM246Q9BRR3 403 aa14.4□□□□□ -0.1
USP38-202ENST00000510377 SATB2Q9UPW6 733 aa14.4□□□□□ -0.1
USP38-202ENST00000510377 BOLA1Q9Y3E2 137 aa14.4□□□□□ -0.1
USP38-202ENST00000510377 SPIN1Q9Y657 262 aaPredicted RBP14.4□□□□□ -0.1
USP38-202ENST00000510377 OR6C70A6NIJ9 312 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 CDRT1O95170 752 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 PPP2R2BQ00005 443 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 PPIGQ13427 754 aaKnown RBP eCLIP14.39□□□□□ -0.11
USP38-202ENST00000510377 SNAPC1Q16533 368 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 CRTC2Q53ET0 693 aaPredicted RBP14.39□□□□□ -0.11
USP38-202ENST00000510377 STEAP3Q658P3 488 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 SYCE2Q6PIF2 218 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 EXOSC8Q96B26 276 aaKnown RBP14.39□□□□□ -0.11
USP38-202ENST00000510377 FAM129BQ96TA1 746 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 IL26Q9NPH9 171 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 PAQR5Q9NXK6 330 aaPredicted RBP14.39□□□□□ -0.11
USP38-202ENST00000510377 SEC14L3Q9UDX4 400 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 NOTOA8MTQ0 251 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 TNFRSF10BO14763 440 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 PDE9AO76083 593 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 MAPK8P45983 427 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 BDKRB1P46663 353 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 TARDBPQ13148 414 aaKnown RBP eCLIP14.39□□□□□ -0.11
USP38-202ENST00000510377 TEAD4Q15561 434 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 CATSPEREQ5SY80 951 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 CST9Q5W186 159 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 SERINC5Q86VE9 423 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 SLAIN1Q8ND83 568 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 FAM83DQ9H4H8 585 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 MAGIXQ9H6Y5 334 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 TBC1D17Q9HA65 648 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 ZDHHC3Q9NYG2 299 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 SLC25A37Q9NYZ2 338 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 ANKMY1Q9P2S6 941 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 HNRNPCL2B2RXH8 293 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 ZNF623O75123 536 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 HMGCLP35914 325 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 TALDO1P37837 337 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 STK19P49842 368 aaPredicted RBP14.39□□□□□ -0.11
USP38-202ENST00000510377 DPY19L1Q2PZI1 675 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 DCST1Q5T197 706 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 IER5LQ5T953 404 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 NPAS3Q8IXF0 933 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 RIMKLAQ8IXN7 391 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 REM2Q8IYK8 340 aaPredicted RBP14.39□□□□□ -0.11
USP38-202ENST00000510377 ZNF296Q8WUU4 475 aaPredicted RBP14.39□□□□□ -0.11
USP38-202ENST00000510377 FNDC11Q9BVV2 318 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 POFUT2Q9Y2G5 429 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 PCDHGB6Q9Y5F9 930 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 CNTRLQ7Z7A1 2325 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 C2orf78A6NCI8 922 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 SGTAO43765 313 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 GABARAPO95166 117 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 SLC10A3P09131 477 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 PSKH1P11801 424 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 RYKP34925 604 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 CLK3P49761 638 aaKnown RBP14.39□□□□□ -0.11
USP38-202ENST00000510377 ZSWIM7Q19AV6 140 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 GALNT7Q86SF2 657 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 NLGN4XQ8N0W4 816 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 CACTIN-AS1Q8N1I8 211 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 AUTS2Q8WXX7 1259 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 DNASE1L2Q92874 299 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 REPS1Q96D71 796 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 HTATIP2Q9BUP3 242 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 POLR2J3Q9H1A7 115 aaKnown RBP14.39□□□□□ -0.11
USP38-202ENST00000510377 TRIM45Q9H8W5 580 aaPredicted RBP14.39□□□□□ -0.11
USP38-202ENST00000510377 ELOVL2Q9NXB9 296 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 STMN3Q9NZ72 180 aa14.39□□□□□ -0.11
USP38-202ENST00000510377 FER1L6Q2WGJ9 1857 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 AGAP5A6NIR3 686 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 SNTNA6NMZ2 147 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 PRAMEF12O95522 483 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 C8GP07360 202 aa14.38□□□□□ -0.11
USP38-202ENST00000510377 BPIP17213 487 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms