RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 GRK3P35626 688 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 P2RY2P41231 377 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 RXRGP48443 463 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 GZMMP51124 257 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 ELP6Q0PNE2 266 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 CDK5R2Q13319 367 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 DGUOKQ16854 277 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 ANKDD1AQ495B1 522 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 SYTL3Q4VX76 610 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 GCNT7Q6ZNI0 430 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 LRRC70Q7Z2Q7 622 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 SERPINA11Q86U17 422 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 ABHD11Q8NFV4 315 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 MAFAQ8NHW3 353 aaPredicted RBP10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 RORBQ92753 470 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 NUS1Q96E22 293 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 PPP1R16AQ96I34 528 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 EPS8L2Q9H6S3 715 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 CARS2Q9HA77 564 aaKnown RBP10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 ANKHQ9HCJ1 492 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 TM9SF3Q9HD45 589 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 DYRK4Q9NR20 520 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 CLEC1BQ9P126 229 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 GULP1Q9UBP9 304 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 RPS6KA6Q9UK32 745 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 PAIP2BQ9ULR5 123 aaKnown RBP10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 PCDHB14Q9Y5E9 798 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 MAGED1Q9Y5V3 778 aaPredicted RBP10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 MTCH2Q9Y6C9 303 aa10.64□□□□□ -0.71
SH3RF1-203ENST00000508685 NOBOXO60393 691 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 DPM1O60762 260 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 ATG13O75143 517 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 SLCO2B1O94956 709 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 SERPINA1P01009 418 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 NTRK1P04629 796 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 ALOX5P09917 674 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 HIST1H2AGP0C0S8 130 aaPredicted RBP10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 LAMP2P13473 410 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 HIST1H2ADP20671 130 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 PCMT1P22061 227 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 PDHA2P29803 388 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 MAGEA8P43361 318 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 PRLHRP49683 370 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 HNMTP50135 292 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 HMGCS1Q01581 520 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 RELAQ04206 551 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 CNTN1Q12860 1018 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 NKG7Q16617 165 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 AAK1Q2M2I8 961 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 PTCHD3Q3KNS1 767 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 SGO1Q5FBB7 561 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 RAET1GQ6H3X3 334 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 NEK5Q6P3R8 708 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 ERN2Q76MJ5 926 aaKnown RBP10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 NRSN1Q8IZ57 195 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 FAM86B1Q8N7N1 296 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 NUDT8Q8WV74 236 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 CMTM7Q96FZ5 175 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 SH3YL1Q96HL8 342 aaPredicted RBP10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 HIST1H2AHQ96KK5 128 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 CSF3RQ99062 836 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 HIST1H2AJQ99878 128 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 H2AFJQ9BTM1 129 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 ATG10Q9H0Y0 220 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 THAP10Q9P2Z0 257 aaPredicted RBP10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 ITGB1BP2Q9UKP3 347 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 MAPRE3Q9UPY8 281 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 PABPN1LA6NDY0 278 aaKnown RBP10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 ARHGEF33A8MVX0 844 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 TMX2-CTNND1H3BSU7 103 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 KPNA5O15131 536 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 LZTS3O60299 673 aaPredicted RBP10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 FOXD2O60548 495 aaPredicted RBP10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 GABARAPO95166 117 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 ANGPTL1O95841 491 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 HTR1AP08908 422 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 MPC1LP0DKB6 136 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 CDH3P22223 829 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 ITPKAP23677 461 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 IGFBP5P24593 272 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 DNAJA1P31689 397 aaKnown RBP10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 PIGAP37287 484 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 PLIN5Q00G26 463 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 CPSF6Q16630 551 aaKnown RBP eCLIP10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 CTU2Q2VPK5 515 aaKnown RBP10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 CCSMST1Q4G0I0 132 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 ATAT1Q5SQI0 421 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 CPZQ66K79 652 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 TMEM220Q6QAJ8 160 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 CYP2U1Q7Z449 544 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 ZDHHC21Q8IVQ6 265 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 CHPFQ8IZ52 775 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 OR7A2PQ8NGA2 310 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 NETO1Q8TDF5 533 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 IPCEF1Q8WWN9 437 aaPredicted RBP10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 STARD8Q92502 1023 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 TMEM159Q96B96 161 aa10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 MTFMTQ96DP5 389 aaKnown RBP10.63□□□□□ -0.71
SH3RF1-203ENST00000508685 METTL2AQ96IZ6 378 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms