RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 ATF6BQ99941 703 aa3.56□□□□□ -1.84
UBE2D3-225ENST00000508476 SDCBP2Q9H190 292 aa3.56□□□□□ -1.84
UBE2D3-225ENST00000508476 RIMS4Q9H426 269 aaPredicted RBP3.56□□□□□ -1.84
UBE2D3-225ENST00000508476 PHPT1Q9NRX4 125 aaPredicted RBP3.56□□□□□ -1.84
UBE2D3-225ENST00000508476 WDR35Q9P2L0 1181 aa3.56□□□□□ -1.84
UBE2D3-225ENST00000508476 ZNF107Q9UII5 783 aaPredicted RBP3.56□□□□□ -1.84
UBE2D3-225ENST00000508476 ZNF840PA6NDX5 716 aa3.55□□□□□ -1.84
UBE2D3-225ENST00000508476 HPP00738 406 aa3.55□□□□□ -1.84
UBE2D3-225ENST00000508476 DUX4L4P0CJ87 422 aa3.55□□□□□ -1.84
UBE2D3-225ENST00000508476 PCP11498 1178 aaKnown RBP3.55□□□□□ -1.84
UBE2D3-225ENST00000508476 CD59P13987 128 aa3.55□□□□□ -1.84
UBE2D3-225ENST00000508476 ACHEP22303 614 aa3.55□□□□□ -1.84
UBE2D3-225ENST00000508476 PIK3R1P27986 724 aa3.55□□□□□ -1.84
UBE2D3-225ENST00000508476 NDST2P52849 883 aa3.55□□□□□ -1.84
UBE2D3-225ENST00000508476 NDUFV3P56181 108 aaKnown RBP3.55□□□□□ -1.84
UBE2D3-225ENST00000508476 TMEM266Q2M3C6 531 aa3.55□□□□□ -1.84
UBE2D3-225ENST00000508476 CRY2Q49AN0 593 aa3.55□□□□□ -1.84
UBE2D3-225ENST00000508476 ARMC4Q5T2S8 1044 aa3.55□□□□□ -1.84
UBE2D3-225ENST00000508476 GPR139Q6DWJ6 353 aa3.55□□□□□ -1.84
UBE2D3-225ENST00000508476 REG3GQ6UW15 175 aa3.55□□□□□ -1.84
UBE2D3-225ENST00000508476 RBPMS2Q6ZRY4 209 aaKnown RBP3.55□□□□□ -1.84
UBE2D3-225ENST00000508476 RTL3Q8N8U3 475 aaKnown RBP3.55□□□□□ -1.84
UBE2D3-225ENST00000508476 XXYLT1Q8NBI6 393 aa3.55□□□□□ -1.84
UBE2D3-225ENST00000508476 RPLP0P6Q8NHW5 317 aa3.55□□□□□ -1.84
UBE2D3-225ENST00000508476 PYCR2Q96C36 320 aa3.55□□□□□ -1.84
UBE2D3-225ENST00000508476 NXPE2Q96DL1 559 aa3.55□□□□□ -1.84
UBE2D3-225ENST00000508476 SPATA33Q96N06 139 aa3.55□□□□□ -1.84
UBE2D3-225ENST00000508476 PILRBQ9UKJ0 227 aa3.55□□□□□ -1.84
UBE2D3-225ENST00000508476 TSPAN16Q9UKR8 245 aa3.55□□□□□ -1.84
UBE2D3-225ENST00000508476 POMT2Q9UKY4 750 aa3.55□□□□□ -1.84
UBE2D3-225ENST00000508476 KLLNB2CW77 178 aa3.54□□□□□ -1.84
UBE2D3-225ENST00000508476 MAGEB2O15479 319 aa3.54□□□□□ -1.84
UBE2D3-225ENST00000508476 RPLP0P05388 317 aaKnown RBP3.54□□□□□ -1.84
UBE2D3-225ENST00000508476 ADRB2P07550 413 aa3.54□□□□□ -1.84
UBE2D3-225ENST00000508476 CPT2P23786 658 aa3.54□□□□□ -1.84
UBE2D3-225ENST00000508476 EEF1B2P24534 225 aaKnown RBP3.54□□□□□ -1.84
UBE2D3-225ENST00000508476 SFTPDP35247 375 aa3.54□□□□□ -1.84
UBE2D3-225ENST00000508476 CAPZA2P47755 286 aa3.54□□□□□ -1.84
UBE2D3-225ENST00000508476 DLK1P80370 383 aa3.54□□□□□ -1.84
UBE2D3-225ENST00000508476 KIAA0141Q14154 515 aaPredicted RBP3.54□□□□□ -1.84
UBE2D3-225ENST00000508476 FAM106AQ4KMX7 169 aa3.54□□□□□ -1.84
UBE2D3-225ENST00000508476 LCE3AQ5TA76 89 aa3.54□□□□□ -1.84
UBE2D3-225ENST00000508476 NAA16Q6N069 864 aaPredicted RBP3.54□□□□□ -1.84
UBE2D3-225ENST00000508476 CFAP161Q6P656 301 aa3.54□□□□□ -1.84
UBE2D3-225ENST00000508476 ANKRD33Q7Z3H0 272 aa3.54□□□□□ -1.84
UBE2D3-225ENST00000508476 C5orf24Q7Z6I8 188 aa3.54□□□□□ -1.84
UBE2D3-225ENST00000508476 PIGWQ7Z7B1 504 aa3.54□□□□□ -1.84
UBE2D3-225ENST00000508476 RNF130Q86XS8 419 aa3.54□□□□□ -1.84
UBE2D3-225ENST00000508476 SLC22A15Q8IZD6 547 aa3.54□□□□□ -1.84
UBE2D3-225ENST00000508476 MAML2Q8IZL2 1156 aaPredicted RBP3.54□□□□□ -1.84
UBE2D3-225ENST00000508476 SPPL2AQ8TCT8 520 aa3.54□□□□□ -1.84
UBE2D3-225ENST00000508476 CHURC1Q8WUH1 139 aa3.54□□□□□ -1.84
UBE2D3-225ENST00000508476 NSMAFQ92636 917 aa3.54□□□□□ -1.84
UBE2D3-225ENST00000508476 ZNF558Q96NG5 402 aa3.54□□□□□ -1.84
UBE2D3-225ENST00000508476 FZD8Q9H461 694 aa3.54□□□□□ -1.84
UBE2D3-225ENST00000508476 JPT2Q9H910 190 aa3.54□□□□□ -1.84
UBE2D3-225ENST00000508476 XAB2Q9HCS7 855 aaKnown RBP3.54□□□□□ -1.84
UBE2D3-225ENST00000508476 IL1RAPQ9NPH3 570 aa3.54□□□□□ -1.84
UBE2D3-225ENST00000508476 HEG1Q9ULI3 1381 aa3.53□□□□□ -1.84
UBE2D3-225ENST00000508476 ARHGEF33A8MVX0 844 aa3.53□□□□□ -1.84
UBE2D3-225ENST00000508476 H3BMM5 538 aa3.53□□□□□ -1.84
UBE2D3-225ENST00000508476 ZNF354AO60765 605 aaPredicted RBP3.53□□□□□ -1.84
UBE2D3-225ENST00000508476 PRDM1O75626 825 aa3.53□□□□□ -1.84
UBE2D3-225ENST00000508476 STAG3L1P0CL83 205 aa3.53□□□□□ -1.84
UBE2D3-225ENST00000508476 AKR1B1P15121 316 aa3.53□□□□□ -1.84
UBE2D3-225ENST00000508476 BTG1P62324 171 aa3.53□□□□□ -1.84
UBE2D3-225ENST00000508476 TRA2BP62995 288 aaKnown RBP3.53□□□□□ -1.84
UBE2D3-225ENST00000508476 CCDC60Q8IWA6 550 aaPredicted RBP3.53□□□□□ -1.84
UBE2D3-225ENST00000508476 PI4KAP1Q8N8J0 262 aa3.53□□□□□ -1.84
UBE2D3-225ENST00000508476 RBM41Q96IZ5 413 aaKnown RBP3.53□□□□□ -1.84
UBE2D3-225ENST00000508476 UBAC1Q9BSL1 405 aa3.53□□□□□ -1.84
UBE2D3-225ENST00000508476 IL36AQ9UHA7 158 aa3.53□□□□□ -1.84
UBE2D3-225ENST00000508476 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
UBE2D3-225ENST00000508476 HCFC1P51610 2035 aa3.53□□□□□ -1.84
UBE2D3-225ENST00000508476 CROCCQ5TZA2 2017 aa3.53□□□□□ -1.84
UBE2D3-225ENST00000508476 A0A087WWV3 80 aa3.52□□□□□ -1.85
UBE2D3-225ENST00000508476 URADA6NGE7 173 aa3.52□□□□□ -1.85
UBE2D3-225ENST00000508476 TRAFD1O14545 582 aaPredicted RBP3.52□□□□□ -1.85
UBE2D3-225ENST00000508476 ZNF749O43361 778 aa3.52□□□□□ -1.85
UBE2D3-225ENST00000508476 C4BPBP20851 252 aa3.52□□□□□ -1.85
UBE2D3-225ENST00000508476 RAB28P51157 221 aa3.52□□□□□ -1.85
UBE2D3-225ENST00000508476 PRELPP51888 382 aa3.52□□□□□ -1.85
UBE2D3-225ENST00000508476 MTCP1P56278 107 aa3.52□□□□□ -1.85
UBE2D3-225ENST00000508476 CACNG1Q06432 222 aa3.52□□□□□ -1.85
UBE2D3-225ENST00000508476 FGD3Q5JSP0 725 aa3.52□□□□□ -1.85
UBE2D3-225ENST00000508476 PRPF39Q86UA1 669 aaKnown RBP3.52□□□□□ -1.85
UBE2D3-225ENST00000508476 KCNMB4Q86W47 210 aa3.52□□□□□ -1.85
UBE2D3-225ENST00000508476 KLHL30-AS1Q8NEE0 82 aa3.52□□□□□ -1.85
UBE2D3-225ENST00000508476 OR9Q2Q8NGE9 314 aa3.52□□□□□ -1.85
UBE2D3-225ENST00000508476 HDAC11Q96DB2 347 aa3.52□□□□□ -1.85
UBE2D3-225ENST00000508476 PGAP3Q96FM1 320 aaPredicted RBP3.52□□□□□ -1.85
UBE2D3-225ENST00000508476 PGM2Q96G03 612 aa3.52□□□□□ -1.85
UBE2D3-225ENST00000508476 RNF121Q9H920 327 aa3.52□□□□□ -1.85
UBE2D3-225ENST00000508476 BCCIPQ9P287 314 aaKnown RBP eCLIP3.52□□□□□ -1.85
UBE2D3-225ENST00000508476 FBXL4Q9UKA2 621 aa3.52□□□□□ -1.85
UBE2D3-225ENST00000508476 PILRAQ9UKJ1 303 aa3.52□□□□□ -1.85
UBE2D3-225ENST00000508476 PLCL2Q9UPR0 1127 aa3.52□□□□□ -1.85
UBE2D3-225ENST00000508476 MRPS18CQ9Y3D5 142 aaKnown RBP3.52□□□□□ -1.85
UBE2D3-225ENST00000508476 MYH14Q7Z406 1995 aaKnown RBP3.52□□□□□ -1.85
UBE2D3-225ENST00000508476 NACADO15069 1562 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms