RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 VEGFDO43915 354 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 IGHV2-70P01814 119 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 CEACAM1P13688 526 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 VCLP18206 1134 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 IL10P22301 178 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 MPZP25189 248 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 SLC6A6P31641 620 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 MFAP3P55082 362 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 CDH11P55287 796 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 GMFBP60983 142 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 SNRPD1P62314 119 aaKnown RBP3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 ILF2Q12905 390 aaKnown RBP3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 TAF13Q15543 124 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 SGCBQ16585 318 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 AARDQ4LEZ3 155 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 XKR6Q5GH73 641 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 NOTUMQ6P988 496 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 CYB5D1Q6P9G0 228 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 OLFM4Q6UX06 510 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 TMPRSS11BQ86T26 416 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 LCA5Q86VQ0 697 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 DNAJC22Q8N4W6 341 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 VANGL1Q8TAA9 524 aaPredicted RBP3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 CCDC110Q8TBZ0 833 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 CENPTQ96BT3 561 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 SGF29Q96ES7 293 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 GIMAP5Q96F15 307 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 SLC47A1Q96FL8 570 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 SLC22A12Q96S37 553 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 MCRIP2Q9BUT9 160 aaKnown RBP3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 TRAF4Q9BUZ4 470 aaPredicted RBP3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 IDI2Q9BXS1 227 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 LMAN1LQ9HAT1 526 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 PRR34Q9NV39 138 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 HMG20BQ9P0W2 317 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 APPL1Q9UKG1 709 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 KIAA1210Q9ULL0 1709 aa3.72□□□□□ -1.81
TRAPPC13-209ENST00000508304 AGRNO00468 2067 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 TEX13DA0A0J9YY54 714 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 TMEM221A6NGB7 291 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 MPHOSPH10O00566 681 aaKnown RBP3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 NOL3O60936 208 aaKnown RBP3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 ATP9AO75110 1047 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 ATP6V1G1O75348 118 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 GLCEO94923 617 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 GSRP00390 522 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 FAM157CP0CG43 387 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 GHRP10912 638 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 IRF2P14316 349 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 ARF4P18085 180 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 JAK1P23458 1154 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 CD27P26842 260 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 PIK3R1P27986 724 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 CEACAM8P31997 349 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 MNDAP41218 407 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 CD86P42081 329 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 SERPINH1P50454 418 aaKnown RBP3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 THOP1P52888 689 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 PDX1P52945 283 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 CASP9P55211 416 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 SLC8A3P57103 927 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 GSDMDP57764 484 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 AKAP17AQ02040 695 aaKnown RBP3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 CTU2Q2VPK5 515 aaKnown RBP3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 HFEQ30201 348 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 CCDC40Q4G0X9 1142 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 LACTB2Q53H82 288 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 LBHQ53QV2 105 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 ELFN2Q5R3F8 820 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 TEX35Q5T0J7 233 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 TRIM65Q6PJ69 517 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 ANKRD46Q86W74 232 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 CDK20Q8IZL9 346 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 BATF2Q8N1L9 274 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 ARHGAP24Q8N264 748 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 BMPERQ8N8U9 685 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 CCDC63Q8NA47 563 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 THAP8Q8NA92 274 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 SLC13A3Q8WWT9 602 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 GMPPAQ96IJ6 420 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 ZNF560Q96MR9 790 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 FAM111AQ96PZ2 611 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 NAP1L3Q99457 506 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 RAD9AQ99638 391 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 RTP3Q9BQQ7 232 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 MIS12Q9H081 205 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 NAPBQ9H115 298 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 ABCG4Q9H172 646 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 SYTL2Q9HCH5 934 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 SERINC1Q9NRX5 453 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 GKN1Q9NS71 199 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 CYP39A1Q9NYL5 469 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 FLRT3Q9NZU0 649 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 ACTR3BQ9P1U1 418 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 RUVBL2Q9Y230 463 aaKnown RBP3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 RPH3AQ9Y2J0 694 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 DISP3Q9P2K9 1392 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 ADAMTS9Q9P2N4 1935 aa3.71□□□□□ -1.82
TRAPPC13-209ENST00000508304 A0A0A6YYC8 382 aaPredicted RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms