RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 MIB1Q86YT6 1006 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 PEX5LQ8IYB4 626 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 PIANPQ8IYJ0 282 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 UBQLNLQ8IYU4 475 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 ENTHD1Q8IYW4 607 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 PHACTR4Q8IZ21 702 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 SLC7A5P1Q8MH63 180 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 OR8H2Q8N162 312 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 CBARPQ8N350 705 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 KRTCAP2Q8N6L1 136 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 PNPLA1Q8N8W4 532 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 DCBLD1Q8N8Z6 715 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 C11orf65Q8NCR3 313 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 IL17RDQ8NFM7 739 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 OR8J2Q8NGG1 315 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 OVCA2Q8WZ82 227 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 RPL3LQ92901 407 aaKnown RBP4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 LPPQ93052 612 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 ESAMQ96AP7 390 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 PLD4Q96BZ4 506 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 CXorf40BQ96DE9 158 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 HIST1H2AHQ96KK5 128 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 FCRL1Q96LA6 429 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 TRNT1Q96Q11 434 aaKnown RBP4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 PANX1Q96RD7 426 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 HIST1H2AJQ99878 128 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 H2AFJQ9BTM1 129 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 DOHHQ9BU89 302 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 C2orf49Q9BVC5 232 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 CDADC1Q9BWV3 514 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 APOL5Q9BWW9 433 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 EMILIN2Q9BXX0 1053 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 ACPTQ9BZG2 426 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 CIPCQ9C0C6 399 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 SLC22A4Q9H015 551 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 MARCH7Q9H992 704 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 ZBTB20Q9HC78 741 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 PCDH12Q9NPG4 1184 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 POLE4Q9NR33 117 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 LATS2Q9NRM7 1088 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 RASSF1Q9NS23 344 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 TRMT13Q9NUP7 481 aaKnown RBP4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 BTNL2Q9UIR0 455 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 CRLS1Q9UJA2 301 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 MKL2Q9ULH7 1088 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 VPS4AQ9UN37 437 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 STUB1Q9UNE7 303 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 SNX7Q9UNH6 387 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 DUSP12Q9UNI6 340 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 ABCG2Q9UNQ0 655 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 RUVBL1Q9Y265 456 aaKnown RBP4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 RBMX2Q9Y388 322 aaKnown RBP4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 ASB1Q9Y576 335 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 PCDHGA6Q9Y5G7 932 aa4.8□□□□□ -1.64
HMGB3P16-201ENST00000508037 MICAL3Q7RTP6 2002 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 CCL15-CCL14A0A0B4J2E2 113 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 TRBV5-4A0A0C4DH59 114 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 IQCMA0A1B0GVH7 501 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 IRGMA1A4Y4 181 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 CCDC182A6NF36 153 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 MEIS3P2A8K0S8 358 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 LOC730098B7Z3J9 87 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 SHISA8B8ZZ34 492 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 H7C4K7 107 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 M0R082 166 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 SCAMP3O14828 347 aaKnown RBP4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 KMOO15229 486 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 SCO2O43819 266 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 PCDHGA12O60330 932 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 ALX3O95076 343 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 SLC25A14O95258 325 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 KCNK5O95279 499 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 PRAMEF1O95521 474 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 EOMESO95936 686 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 PDYNP01213 254 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 PRLP01236 227 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 ZNF865P0CJ78 1059 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 PRSS56P0CW18 603 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 MPC1LP0DKB6 136 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 ADORA3P0DMS8 318 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 EPXP11678 715 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 COX7A2P14406 83 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 DDX5P17844 614 aaKnown RBP4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 CYP2A7P20853 494 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 IGFBP4P22692 258 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 IGFBP6P24592 240 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 ACRV1P26436 265 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 RRM2P31350 389 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 ATP5C1P36542 298 aaKnown RBP4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 BMPR1AP36894 532 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 SPAM1P38567 509 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 NSG1P42857 185 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 MAPK9P45984 424 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 HTR3AP46098 478 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 GSK3AP49840 483 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 CDKN1CP49918 316 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 RORCP51449 518 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 AP1S2P56377 157 aa4.79□□□□□ -1.64
HMGB3P16-201ENST00000508037 HMGCS1Q01581 520 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms