RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 ABCG1P45844 678 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 RPP38P78345 283 aaKnown RBP6.89□□□□□ -1.31
CLCN3-206ENST00000507875 ECT2LQ008S8 904 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 CHAF1BQ13112 559 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 DUSP8Q13202 625 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 RUNX3Q13761 415 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 IRF3Q14653 427 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 BAK1Q16611 211 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 PTCHD3Q3KNS1 767 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 FBXO43Q4G163 708 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 CEP78Q5JTW2 689 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 LCE2CQ5TA81 110 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 ATPAF1Q5TC12 328 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-206ENST00000507875 KIAA0930Q6ICG6 404 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-206ENST00000507875 TPGS1Q6ZTW0 290 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 CTAGE3PQ8IX95 158 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 FITM2Q8N6M3 262 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 OR2AP1Q8NGE2 309 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 OR52K1Q8NGK4 314 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 GANCQ8TET4 914 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 VPS33AQ96AX1 596 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 SDCCAG3Q96C92 435 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 SERAC1Q96JX3 654 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 TRIB3Q96RU7 358 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 KLF6Q99612 283 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-206ENST00000507875 OSBPL1AQ9BXW6 950 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 ECT2Q9H8V3 914 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 SLC40A1Q9NP59 571 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 SLCO1B3Q9NPD5 702 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 SNTG1Q9NSN8 517 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 TMEM140Q9NV12 185 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 SLAMF8Q9P0V8 285 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 SLC17A7Q9P2U7 560 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 DKK4Q9UBT3 224 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 ZFP69BQ9UJL9 534 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 CFL2Q9Y281 166 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 PPIL1Q9Y3C6 166 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 TCAF1Q9Y4C2 921 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 TICRRQ7Z2Z1 1910 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 MYO7AQ13402 2215 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 BDP1A6H8Y1 2624 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 MYOFQ9NZM1 2061 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 hCG_1809904A0A1W2PP81 198 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 A0A1W2PPE2 198 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 A0A1W2PR64 198 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 CXorf49A8MYA2 514 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-206ENST00000507875 LOC730098B7Z3J9 87 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 PEX12O00623 359 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 S100A9P06702 114 aaKnown RBP6.89□□□□□ -1.31
CLCN3-206ENST00000507875 PIM1P11309 404 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-206ENST00000507875 SRCP12931 536 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 HLA-FP30511 346 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 CD70P32970 193 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 GRIA1P42261 906 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 PITPNBP48739 271 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 FAM3BP58499 235 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-206ENST00000507875 YBX1P67809 324 aaKnown RBP6.89□□□□□ -1.31
CLCN3-206ENST00000507875 ACVR1Q04771 509 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 UGP2Q16851 508 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 CARD16Q5EG05 197 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 ABLIM2Q6H8Q1 611 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 OR7E24Q6IFN5 339 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 TRAT1Q6PIZ9 186 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 VITQ6UXI7 678 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 APCDD1Q8J025 514 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 FRMD1Q8N878 549 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 POC1BQ8TC44 478 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 HMGB4Q8WW32 186 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 DNASE1L2Q92874 299 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 TDRD1Q9BXT4 1180 aaKnown RBP6.89□□□□□ -1.31
CLCN3-206ENST00000507875 STN1Q9H668 368 aaKnown RBP6.89□□□□□ -1.31
CLCN3-206ENST00000507875 ATP13A3Q9H7F0 1226 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 ADPRHL2Q9NX46 363 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 DEC1Q9P2X7 70 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 MBD1Q9UIS9 605 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-206ENST00000507875 ERVW-1Q9UQF0 538 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 ERVK-19Q9WJR5 959 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 MAD1L1Q9Y6D9 718 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 WNT6Q9Y6F9 365 aa6.89□□□□□ -1.31
CLCN3-206ENST00000507875 TSPAN11A1L157 253 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 A4D1N5 150 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 GOLGA8TH3BQL2 631 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 KLHL2O95198 593 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 SNRPAP09012 282 aaKnown RBP6.88□□□□□ -1.31
CLCN3-206ENST00000507875 TTKP33981 857 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 ETV4P43268 484 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 TNFRSF4P43489 277 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 POU3F4P49335 361 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 ACTR1AP61163 376 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 ST8SIA6P61647 398 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 POLR2LP62875 67 aaKnown RBP6.88□□□□□ -1.31
CLCN3-206ENST00000507875 CRYMQ14894 314 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 TAF1AQ15573 450 aaPredicted RBP6.88□□□□□ -1.31
CLCN3-206ENST00000507875 HFEQ30201 348 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 ITPRIPL2Q3MIP1 535 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 Q3ZCU0 254 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 ANKRD20A4Q4UJ75 823 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 SGO1Q5FBB7 561 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 GRTP1Q5TC63 336 aa6.88□□□□□ -1.31
CLCN3-206ENST00000507875 CACHD1Q5VU97 1274 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms