RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 ZNF23P17027 643 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 RPL3P39023 403 aaKnown RBP16.97■□□□□ 0.31
SFXN1-208ENST00000507823 DAG1Q14118 895 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 VEZF1Q14119 521 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 FAM71E1Q6IPT2 247 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 KRT80Q6KB66 452 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 LPCAT2Q7L5N7 544 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 VPS37AQ8NEZ2 397 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 NCSTNQ92542 709 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 SLC17A4Q9Y2C5 497 aa16.97■□□□□ 0.31
SFXN1-208ENST00000507823 SERPINA1P01009 418 aa16.96■□□□□ 0.31
SFXN1-208ENST00000507823 SEMG1P04279 462 aa16.96■□□□□ 0.31
SFXN1-208ENST00000507823 PTX3P26022 381 aaPredicted RBP16.96■□□□□ 0.31
SFXN1-208ENST00000507823 NTSR1P30989 418 aa16.96■□□□□ 0.31
SFXN1-208ENST00000507823 KIAA1211LQ6NV74 962 aa16.96■□□□□ 0.31
SFXN1-208ENST00000507823 TMIGD1Q6UXZ0 262 aa16.96■□□□□ 0.31
SFXN1-208ENST00000507823 KRT78Q8N1N4 520 aa16.96■□□□□ 0.31
SFXN1-208ENST00000507823 ZCCHC7Q8N3Z6 543 aaKnown RBP16.96■□□□□ 0.31
SFXN1-208ENST00000507823 DHRSXQ8N5I4 330 aa16.96■□□□□ 0.31
SFXN1-208ENST00000507823 FAM47BQ8NA70 645 aa16.96■□□□□ 0.31
SFXN1-208ENST00000507823 GPR156Q8NFN8 814 aa16.96■□□□□ 0.31
SFXN1-208ENST00000507823 ZFP90Q8TF47 636 aa16.96■□□□□ 0.31
SFXN1-208ENST00000507823 TRIT1Q9H3H1 467 aaKnown RBP16.96■□□□□ 0.31
SFXN1-208ENST00000507823 CORO2BQ9UQ03 480 aa16.96■□□□□ 0.31
SFXN1-208ENST00000507823 A0A1W2PPV9 198 aa16.96■□□□□ 0.3
SFXN1-208ENST00000507823 ANHXE9PGG2 379 aa16.96■□□□□ 0.3
SFXN1-208ENST00000507823 SEMA3DO95025 777 aa16.96■□□□□ 0.3
SFXN1-208ENST00000507823 C1QCP02747 245 aa16.96■□□□□ 0.3
SFXN1-208ENST00000507823 FUCA1P04066 466 aa16.96■□□□□ 0.3
SFXN1-208ENST00000507823 GNAO1P09471 354 aa16.96■□□□□ 0.3
SFXN1-208ENST00000507823 SERPINB1P30740 379 aa16.96■□□□□ 0.3
SFXN1-208ENST00000507823 TIE1P35590 1138 aa16.96■□□□□ 0.3
SFXN1-208ENST00000507823 TUBA4AP68366 448 aa16.96■□□□□ 0.3
SFXN1-208ENST00000507823 TMEM196Q5HYL7 178 aa16.96■□□□□ 0.3
SFXN1-208ENST00000507823 TMEM214Q6NUQ4 689 aaKnown RBP16.96■□□□□ 0.3
SFXN1-208ENST00000507823 ZNF621Q6ZSS3 439 aa16.96■□□□□ 0.3
SFXN1-208ENST00000507823 IKBIPQ70UQ0 350 aa16.96■□□□□ 0.3
SFXN1-208ENST00000507823 R3HCC1LQ7Z5L2 792 aaKnown RBP16.96■□□□□ 0.3
SFXN1-208ENST00000507823 SYNPOQ8N3V7 929 aa16.96■□□□□ 0.3
SFXN1-208ENST00000507823 OR4K1Q8NGD4 311 aa16.96■□□□□ 0.3
SFXN1-208ENST00000507823 ASB12Q8WXK4 309 aa16.96■□□□□ 0.3
SFXN1-208ENST00000507823 SCARF2Q96GP6 870 aaPredicted RBP16.96■□□□□ 0.3
SFXN1-208ENST00000507823 YIPF3Q9GZM5 350 aa16.96■□□□□ 0.3
SFXN1-208ENST00000507823 MKRN2Q9H000 416 aaKnown RBP16.96■□□□□ 0.3
SFXN1-208ENST00000507823 TPT1P8Q9HAU6 139 aa16.96■□□□□ 0.3
SFXN1-208ENST00000507823 SAMD4AQ9UPU9 718 aaKnown RBP16.96■□□□□ 0.3
SFXN1-208ENST00000507823 PGM3O95394 542 aa16.95■□□□□ 0.3
SFXN1-208ENST00000507823 FURINP09958 794 aa16.95■□□□□ 0.3
SFXN1-208ENST00000507823 NR1H2P55055 460 aa16.95■□□□□ 0.3
SFXN1-208ENST00000507823 ZNF385BQ569K4 471 aa16.95■□□□□ 0.3
SFXN1-208ENST00000507823 ANKRD26P1Q6NSI1 321 aa16.95■□□□□ 0.3
SFXN1-208ENST00000507823 METTL25Q8N6Q8 603 aa16.95■□□□□ 0.3
SFXN1-208ENST00000507823 ZNF740Q8NDX6 193 aa16.95■□□□□ 0.3
SFXN1-208ENST00000507823 MAGEE2Q8TD90 523 aaPredicted RBP16.95■□□□□ 0.3
SFXN1-208ENST00000507823 C16orf78Q8WTQ4 265 aa16.95■□□□□ 0.3
SFXN1-208ENST00000507823 SMPDL3AQ92484 453 aa16.95■□□□□ 0.3
SFXN1-208ENST00000507823 NCLNQ969V3 563 aa16.95■□□□□ 0.3
SFXN1-208ENST00000507823 RMND5BQ96G75 393 aaPredicted RBP16.95■□□□□ 0.3
SFXN1-208ENST00000507823 PLAGL1Q9UM63 463 aa16.95■□□□□ 0.3
SFXN1-208ENST00000507823 OR1A2Q9Y585 309 aa16.95■□□□□ 0.3
SFXN1-208ENST00000507823 C5orf42Q9H799 3197 aa16.95■□□□□ 0.3
SFXN1-208ENST00000507823 NUP214P35658 2090 aaPredicted RBP16.95■□□□□ 0.3
SFXN1-208ENST00000507823 GNG14A0A1W2PPG7 69 aa16.95■□□□□ 0.3
SFXN1-208ENST00000507823 TBX6O95947 436 aaPredicted RBP16.95■□□□□ 0.3
SFXN1-208ENST00000507823 PAK4O96013 591 aaPredicted RBP16.95■□□□□ 0.3
SFXN1-208ENST00000507823 REEP5Q00765 189 aa16.95■□□□□ 0.3
SFXN1-208ENST00000507823 HTR4Q13639 388 aa16.95■□□□□ 0.3
SFXN1-208ENST00000507823 BORAQ6PGQ7 559 aa16.95■□□□□ 0.3
SFXN1-208ENST00000507823 PATL1Q86TB9 770 aaKnown RBP16.95■□□□□ 0.3
SFXN1-208ENST00000507823 SATL1Q86VE3 508 aa16.95■□□□□ 0.3
SFXN1-208ENST00000507823 C17orf64Q86WR6 236 aa16.95■□□□□ 0.3
SFXN1-208ENST00000507823 PJA1Q8NG27 643 aa16.95■□□□□ 0.3
SFXN1-208ENST00000507823 ZFP28Q8NHY6 868 aa16.95■□□□□ 0.3
SFXN1-208ENST00000507823 WDR48Q8TAF3 677 aa16.95■□□□□ 0.3
SFXN1-208ENST00000507823 OR51B5Q9H339 312 aa16.95■□□□□ 0.3
SFXN1-208ENST00000507823 CLK4Q9HAZ1 481 aaKnown RBP16.95■□□□□ 0.3
SFXN1-208ENST00000507823 ATAD3AQ9NVI7 634 aa16.95■□□□□ 0.3
SFXN1-208ENST00000507823 FBXL12Q9NXK8 326 aa16.95■□□□□ 0.3
SFXN1-208ENST00000507823 ZNF282Q9UDV7 671 aaPredicted RBP16.95■□□□□ 0.3
SFXN1-208ENST00000507823 UTS2RQ9UKP6 389 aa16.95■□□□□ 0.3
SFXN1-208ENST00000507823 WBP11Q9Y2W2 641 aaKnown RBP16.95■□□□□ 0.3
SFXN1-208ENST00000507823 MYOCOSA0A1B0GUC4 107 aa16.94■□□□□ 0.3
SFXN1-208ENST00000507823 CST1P01037 141 aa16.94■□□□□ 0.3
SFXN1-208ENST00000507823 TGFB1P01137 390 aa16.94■□□□□ 0.3
SFXN1-208ENST00000507823 SLC35G4P0C7Q5 338 aa16.94■□□□□ 0.3
SFXN1-208ENST00000507823 DLX2Q07687 328 aaPredicted RBP16.94■□□□□ 0.3
SFXN1-208ENST00000507823 TSTA3Q13630 321 aaPredicted RBP16.94■□□□□ 0.3
SFXN1-208ENST00000507823 THEMIS2Q5TEJ8 643 aa16.94■□□□□ 0.3
SFXN1-208ENST00000507823 CACUL1Q86Y37 369 aa16.94■□□□□ 0.3
SFXN1-208ENST00000507823 TSPAN14Q8NG11 270 aa16.94■□□□□ 0.3
SFXN1-208ENST00000507823 GDF15Q99988 308 aa16.94■□□□□ 0.3
SFXN1-208ENST00000507823 BTBD1Q9H0C5 482 aa16.94■□□□□ 0.3
SFXN1-208ENST00000507823 RBM38Q9H0Z9 239 aaKnown RBP16.94■□□□□ 0.3
SFXN1-208ENST00000507823 TUBA8Q9NY65 449 aaPredicted RBP16.94■□□□□ 0.3
SFXN1-208ENST00000507823 RANBP2P49792 3224 aaKnown RBP16.94■□□□□ 0.3
SFXN1-208ENST00000507823 A0A1B0GTW7 788 aa16.94■□□□□ 0.3
SFXN1-208ENST00000507823 A0A1W2PQF6 199 aa16.94■□□□□ 0.3
SFXN1-208ENST00000507823 KIF1CO43896 1103 aaKnown RBP16.94■□□□□ 0.3
SFXN1-208ENST00000507823 CPSF4O95639 269 aaKnown RBP16.94■□□□□ 0.3
SFXN1-208ENST00000507823 CEACAM5P06731 702 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms