RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 STAMBPO95630 424 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 GCFC2P16383 781 aaKnown RBP3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 UGT1A1P22309 533 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 LORP23490 312 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 PTBP1P26599 531 aaKnown RBP eCLIP3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 LONP1P36776 959 aaKnown RBP3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 FNTAP49354 379 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 CEBPDP49716 269 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 RAD23BP54727 409 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 NLRP11P59045 1033 aaKnown RBP3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 RASGEF1BQ0VAM2 473 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 TOB2Q14106 344 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 R3HDM1Q15032 1099 aaKnown RBP3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 KCNA10Q16322 511 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 DECR1Q16698 335 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 BCL7AQ4VC05 210 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 AGKQ53H12 422 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 ZNF542PQ5EBM4 170 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 ARMCX4Q5H9R4 360 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 EPHA10Q5JZY3 1008 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 AKNAD1Q5T1N1 836 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 TAF3Q5VWG9 929 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 LIPKQ5VXJ0 399 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 NKAIN2Q5VXU1 208 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 CARD17Q5XLA6 110 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 CEP85Q6P2H3 762 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 KLC3Q6P597 504 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 LRRC8BQ6P9F7 803 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 CTR9Q6PD62 1173 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 KCNV1Q6PIU1 500 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 TRMT11Q7Z4G4 463 aaKnown RBP3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 TMPRSS12Q86WS5 348 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 MAP7D3Q8IWC1 876 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 NOA1Q8NC60 698 aaKnown RBP3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 ACVR1CQ8NER5 493 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 ENGASEQ8NFI3 743 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 OSR1Q8TAX0 266 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 DNAJA4Q8WW22 397 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 SLC44A1Q8WWI5 657 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 TRIB2Q92519 343 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 DVL3Q92997 716 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 TAAR8Q969N4 342 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 TSACCQ96A04 125 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 PINX1Q96BK5 328 aaKnown RBP3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 MYEOVQ96EZ4 313 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 ZNF503Q96F45 646 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 PIWIL1Q96J94 861 aaKnown RBP3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 FAM71F1Q96KD3 344 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 LRFN5Q96NI6 719 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 VPS35Q96QK1 796 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 RAB40CQ96S21 281 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 CCNL2Q96S94 520 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 ADOQ96SZ5 270 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 MTERF1Q99551 399 aaKnown RBP3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 EFHD1Q9BUP0 239 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 TRAF4Q9BUZ4 470 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 NUP58Q9BVL2 599 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 FUNDC2Q9BWH2 189 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 POLDIP3Q9BY77 421 aaKnown RBP3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 LRRC2Q9BYS8 371 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 MTIF3Q9H2K0 278 aaKnown RBP3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 DPEP3Q9H4B8 488 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 MARCH7Q9H992 704 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 CHRAC1Q9NRG0 131 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 MRPL17Q9NRX2 175 aaKnown RBP3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 ACOXLQ9NUZ1 547 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 THEGQ9P2T0 379 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 ERVK-18Q9QC07 812 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 SEC14L3Q9UDX4 400 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 SLC12A6Q9UHW9 1150 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 PLCL2Q9UPR0 1127 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 WDR83OSQ9Y284 106 aa3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 CENPJQ9HC77 1338 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P22-201ENST00000505315 EIF4G1Q04637 1599 aaKnown RBP3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 PLEKHG2Q9H7P9 1386 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 MED19A0JLT2 244 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 HEATR9A2RTY3 570 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 OR2M5A3KFT3 312 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 C4orf47A7E2U8 309 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 BECN2A8MW95 431 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 NPIPA3F8WFD2 350 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 H7C1Q1 480 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 CHEK1O14757 476 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 SCO2O43819 266 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 GPR137BO60478 399 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 LRP3O75074 770 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 ECI2O75521 394 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 SLITRK3O94933 977 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 MT-ND1P03886 318 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 WNT1P04628 370 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 ITGB3P05106 788 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 TROVE2P10155 538 aaKnown RBP eCLIP3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 FCGR1AP12314 374 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 ZNF44P15621 663 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 CD9P21926 228 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 DPP4P27487 766 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 HTR2AP28223 471 aa3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 NMT1P30419 496 aaKnown RBP3.42□□□□□ -1.86
HMGB1P22-201ENST00000505315 HNRNPH1P31943 449 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms