RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 IGHV4-31P0DP07 118 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 ERVK-10P10266 1014 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 SCG2P13521 617 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 TCF4P15884 667 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 EPCAMP16422 314 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 LHCGRP22888 699 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 CA6P23280 308 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 HOXC8P31273 242 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 HSD17B3P37058 310 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 CDKN1AP38936 164 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 MAZP56270 477 aaKnown RBP2.89□□□□□ -1.95
RFC1-209ENST00000504974 MTCP1P56278 107 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 TUBB4BP68371 445 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 DLK1P80370 383 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 KLC1Q07866 573 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 ILF2Q12905 390 aaKnown RBP2.89□□□□□ -1.95
RFC1-209ENST00000504974 HNRNPDQ14103 355 aaKnown RBP2.89□□□□□ -1.95
RFC1-209ENST00000504974 P2RY6Q15077 328 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 NPTX1Q15818 432 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 CTU2Q2VPK5 515 aaKnown RBP2.89□□□□□ -1.95
RFC1-209ENST00000504974 LACTB2Q53H82 288 aaPredicted RBP2.89□□□□□ -1.95
RFC1-209ENST00000504974 SLC35D3Q5M8T2 416 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 LCN1P1Q5VSP4 162 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 DCLRE1AQ6PJP8 1040 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 MOXD1Q6UVY6 613 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 PIGZQ86VD9 579 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 NDUFAF2Q8N183 169 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 RASGEF1AQ8N9B8 481 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 NOA1Q8NC60 698 aaKnown RBP2.89□□□□□ -1.95
RFC1-209ENST00000504974 OR10Q1Q8NGQ4 319 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 NSMAFQ92636 917 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 ZNF501Q96CX3 271 aaPredicted RBP2.89□□□□□ -1.95
RFC1-209ENST00000504974 GIMAP5Q96F15 307 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 LRRC3BQ96PB8 259 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 F2RL3Q96RI0 385 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 INTS14Q96SY0 518 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 CITED2Q99967 270 aaPredicted RBP2.89□□□□□ -1.95
RFC1-209ENST00000504974 THUMPD3Q9BV44 507 aaKnown RBP2.89□□□□□ -1.95
RFC1-209ENST00000504974 TLE6Q9H808 572 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 Q9H8V8 135 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 RAB9BQ9NP90 201 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 CHST11Q9NPF2 352 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 SCRT2Q9NQ03 307 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 SH3GLB2Q9NR46 395 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 DDX43Q9NXZ2 648 aaKnown RBP2.89□□□□□ -1.95
RFC1-209ENST00000504974 SNX7Q9UNH6 387 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 TRIM17Q9Y577 477 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 R4GN57 208 aa2.89□□□□□ -1.95
RFC1-209ENST00000504974 PALLDQ8WX93 1383 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 UBR3Q6ZT12 1888 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 C4BP0C0L5 1744 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 COL5A3P25940 1745 aaPredicted RBP2.88□□□□□ -1.95
RFC1-209ENST00000504974 KDM6AO15550 1401 aaPredicted RBP2.88□□□□□ -1.95
RFC1-209ENST00000504974 FPGTO14772 594 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 EPHB6O15197 1021 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 WDR46O15213 610 aaKnown RBP2.88□□□□□ -1.95
RFC1-209ENST00000504974 RPN1P04843 607 aaKnown RBP2.88□□□□□ -1.95
RFC1-209ENST00000504974 GLULP15104 373 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 IFNAR1P17181 557 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 TCEA1P23193 301 aaKnown RBP2.88□□□□□ -1.95
RFC1-209ENST00000504974 ANOS1P23352 680 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 TLX1P31314 330 aaPredicted RBP2.88□□□□□ -1.95
RFC1-209ENST00000504974 RFC4P35249 363 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 MAGEA11P43364 429 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 VAMP7P51809 220 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 IRX6P78412 446 aaPredicted RBP2.88□□□□□ -1.95
RFC1-209ENST00000504974 RASGEF1BQ0VAM2 473 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 LBHQ53QV2 105 aaPredicted RBP2.88□□□□□ -1.95
RFC1-209ENST00000504974 C6orf136Q5SQH8 315 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 FAM91A1Q658Y4 838 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 OR4A47Q6IF82 309 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 FAM53AQ6NSI3 398 aaPredicted RBP2.88□□□□□ -1.95
RFC1-209ENST00000504974 CTR9Q6PD62 1173 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 ABI3BPQ7Z7G0 1075 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 DZIP1Q86YF9 867 aaKnown RBP2.88□□□□□ -1.95
RFC1-209ENST00000504974 CROCCP3Q8IVE0 287 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 KLHL7Q8IXQ5 586 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 NIPA2Q8N8Q9 360 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 CCDC63Q8NA47 563 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 GPRC5AQ8NFJ5 357 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 OR2T11Q8NH01 316 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.88□□□□□ -1.95
RFC1-209ENST00000504974 DEPDC1BQ8WUY9 529 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 HEXDCQ8WVB3 486 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 ST6GALNAC6Q969X2 333 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 TSACCQ96A04 125 aaPredicted RBP2.88□□□□□ -1.95
RFC1-209ENST00000504974 CENPTQ96BT3 561 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 PYCR2Q96C36 320 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 PRAC1Q96KF2 57 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 CAPNS2Q96L46 248 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 CFAP53Q96M91 514 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 SHARPINQ9H0F6 387 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 ZWILCHQ9H900 591 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 TRPV4Q9HBA0 871 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 GSN-AS1Q9NRJ2 163 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 EPHA6Q9UF33 1036 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 C19orf25Q9UFG5 118 aaPredicted RBP2.88□□□□□ -1.95
RFC1-209ENST00000504974 CHKBQ9Y259 395 aa2.88□□□□□ -1.95
RFC1-209ENST00000504974 MRPS28Q9Y2Q9 187 aaKnown RBP2.88□□□□□ -1.95
RFC1-209ENST00000504974 ARFGEF1Q9Y6D6 1849 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms