RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 TNFRSF10AO00220 468 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 PSMD12O00232 456 aaPredicted RBP9.94□□□□□ -0.82
TPM3-217ENST00000504663 PLPP1O14494 284 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 P2RX6O15547 441 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 DNAJC8O75937 253 aaPredicted RBP9.94□□□□□ -0.82
TPM3-217ENST00000504663 SEMA3DO95025 777 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 FKBP9O95302 570 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 TYRP1P17643 537 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 CALB2P22676 271 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 JAK1P23458 1154 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 CMPK1P30085 196 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 CSF2RBP32927 897 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 GABRA4P48169 554 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 EPHA4P54764 986 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 NME5P56597 212 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 C21orf58P58505 322 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 CYP4F2P78329 520 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 RCAN2Q14206 197 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 TRIM61Q5EBN2 209 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 TCEAL6Q6IPX3 200 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 FBXO42Q6P3S6 717 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 BLOC1S3Q6QNY0 202 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 KRT78Q8N1N4 520 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 MIER2Q8N344 545 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 METTL4Q8N3J2 472 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 LIX1Q8N485 282 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 ARHGEF39Q8N4T4 335 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 C1orf52Q8N6N3 182 aaKnown RBP9.94□□□□□ -0.82
TPM3-217ENST00000504663 AVL9Q8NBF6 648 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 MFSD9Q8NBP5 474 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 RBM15BQ8NDT2 890 aaKnown RBP9.94□□□□□ -0.82
TPM3-217ENST00000504663 OR4C6Q8NH72 309 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 OR10G6Q8NH81 332 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 BAHD1Q8TBE0 780 aaPredicted RBP9.94□□□□□ -0.82
TPM3-217ENST00000504663 TCEAL3Q969E4 200 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 UBE2E3Q969T4 207 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 SH3KBP1Q96B97 665 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 REPS1Q96D71 796 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 TM4SF19Q96DZ7 209 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 METTL2AQ96IZ6 378 aaKnown RBP9.94□□□□□ -0.82
TPM3-217ENST00000504663 LOXL4Q96JB6 756 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 APOLD1Q96LR9 279 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 FCRL4Q96PJ5 515 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 OR2A5Q96R48 311 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 SORBS1Q9BX66 1292 aaKnown RBP9.94□□□□□ -0.82
TPM3-217ENST00000504663 COL25A1Q9BXS0 654 aaPredicted RBP9.94□□□□□ -0.82
TPM3-217ENST00000504663 RAB33BQ9H082 229 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 OR51B5Q9H339 312 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 TXLNGQ9NUQ3 528 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 HRASLS2Q9NWW9 162 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 TAS2R1Q9NYW7 299 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 NOP53Q9NZM5 478 aaKnown RBP9.94□□□□□ -0.82
TPM3-217ENST00000504663 VPS29Q9UBQ0 182 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 TMED5Q9Y3A6 229 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 AP1M2Q9Y6Q5 423 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 RP1P56715 2156 aa9.94□□□□□ -0.82
TPM3-217ENST00000504663 FRYLO94915 3013 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 MN1Q10571 1320 aaPredicted RBP9.93□□□□□ -0.82
TPM3-217ENST00000504663 IGHV1OR21-1A0A087WYE8 117 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 GSAPA4D1B5 854 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 FXYD1O00168 92 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 ARHGAP33O14559 1287 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 B4GAT1O43505 415 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 NUDT21O43809 227 aaKnown RBP9.93□□□□□ -0.82
TPM3-217ENST00000504663 SH3BGRLO75368 114 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 SEC22BO75396 215 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 CLEC3AO75596 197 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 UBXN7O94888 489 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 TGFB1P01137 390 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 STATHP02808 62 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 PROS1P07225 676 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 CTSBP07858 339 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 ST6GAL1P15907 406 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 HOXB9P17482 250 aaPredicted RBP9.93□□□□□ -0.82
TPM3-217ENST00000504663 ITGAXP20702 1163 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 HRH2P25021 359 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 CXCR2P25025 360 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 TPP2P29144 1249 aaPredicted RBP9.93□□□□□ -0.82
TPM3-217ENST00000504663 SERPINB1P30740 379 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 TIA1P31483 386 aaKnown RBP eCLIP9.93□□□□□ -0.82
TPM3-217ENST00000504663 BSGP35613 385 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 AHRP35869 848 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 MPLP40238 635 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 DPP6P42658 865 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 ARRB1P49407 418 aaPredicted RBP9.93□□□□□ -0.82
TPM3-217ENST00000504663 CCT8P50990 548 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 GFERP55789 205 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 PHC1P78364 1004 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 RELAQ04206 551 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 ACTN3Q08043 901 aaPredicted RBP9.93□□□□□ -0.82
TPM3-217ENST00000504663 CUL3Q13618 768 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 TLR1Q15399 786 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 CCDC6Q16204 474 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 IMPG1Q17R60 797 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 AGKQ53H12 422 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 DEPDC1Q5TB30 811 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 KHDRBS2Q5VWX1 349 aaKnown RBP9.93□□□□□ -0.82
TPM3-217ENST00000504663 NOXRED1Q6NXP6 359 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 ZNF793Q6ZN11 406 aa9.93□□□□□ -0.82
TPM3-217ENST00000504663 PRR23BQ6ZRT6 265 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms