RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 SOCS2O14508 198 aa20.49■□□□□ 0.87
UBE2D3-216ENST00000503742 TBX6O95947 436 aaPredicted RBP20.49■□□□□ 0.87
UBE2D3-216ENST00000503742 PSMB5P28074 263 aa20.49■□□□□ 0.87
UBE2D3-216ENST00000503742 SFSWAPQ12872 951 aaKnown RBP20.49■□□□□ 0.87
UBE2D3-216ENST00000503742 SLC14A1Q13336 389 aa20.49■□□□□ 0.87
UBE2D3-216ENST00000503742 MAP7Q14244 749 aa20.49■□□□□ 0.87
UBE2D3-216ENST00000503742 EOGTQ5NDL2 527 aa20.49■□□□□ 0.87
UBE2D3-216ENST00000503742 UGT2A3Q6UWM9 527 aa20.49■□□□□ 0.87
UBE2D3-216ENST00000503742 TRIM69Q86WT6 500 aa20.49■□□□□ 0.87
UBE2D3-216ENST00000503742 CLECL1Q8IZS7 167 aa20.49■□□□□ 0.87
UBE2D3-216ENST00000503742 PACRGLQ8N7B6 248 aa20.49■□□□□ 0.87
UBE2D3-216ENST00000503742 SH3KBP1Q96B97 665 aa20.49■□□□□ 0.87
UBE2D3-216ENST00000503742 PHF12Q96QT6 1004 aa20.49■□□□□ 0.87
UBE2D3-216ENST00000503742 AIF1LQ9BQI0 150 aa20.49■□□□□ 0.87
UBE2D3-216ENST00000503742 DLGAP2Q9P1A6 1054 aa20.49■□□□□ 0.87
UBE2D3-216ENST00000503742 MOSPD1Q9UJG1 213 aa20.49■□□□□ 0.87
UBE2D3-216ENST00000503742 NUP214P35658 2090 aaPredicted RBP20.49■□□□□ 0.87
UBE2D3-216ENST00000503742 SAP18O00422 153 aaKnown RBP20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 CXCR2P25025 360 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 ACSL1P33121 698 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 REEP5Q00765 189 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 CCINQ13939 588 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 UAP1L1Q3KQV9 507 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 FBXO43Q4G163 708 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 C6orf52Q5T4I8 152 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 KIAA1324Q6UXG2 1013 aaKnown RBP20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 RAB42Q8N4Z0 105 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 RNF145Q96MT1 663 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 PRPF18Q99633 342 aaKnown RBP20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 CARS2Q9HA77 564 aaKnown RBP20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 IMP3Q9NV31 184 aaKnown RBP20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 V9GYQ6 96 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 ARHGAP10A1A4S6 786 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 PRSS38A1L453 326 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 SAC3D1A6NKF1 404 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 ACOX3O15254 700 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 C1QCP02747 245 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 RETP07949 1114 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 RAP2AP10114 183 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 GLULP15104 373 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 RAB28P51157 221 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 CCR8P51685 355 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 CLDN2P57739 230 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 RBBP5Q15291 538 aaKnown RBP20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 ANXA8L1Q5VT79 327 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 SPRED1Q7Z699 444 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 SERPINA11Q86U17 422 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 OSBPL11Q9BXB4 747 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 PITHD1Q9GZP4 211 aaPredicted RBP20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 PRO3102Q9H379 93 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 REEP4Q9H6H4 257 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 MVB12BQ9H7P6 319 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 NT5DC2Q9H857 520 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 MYNNQ9NPC7 610 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 UBAP1Q9NZ09 502 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 GMEB1Q9Y692 573 aa20.48■□□□□ 0.87
UBE2D3-216ENST00000503742 EVPLLA8MZ36 301 aa20.47■□□□□ 0.87
UBE2D3-216ENST00000503742 CLIC1O00299 241 aa20.47■□□□□ 0.87
UBE2D3-216ENST00000503742 GPX2P18283 190 aa20.47■□□□□ 0.87
UBE2D3-216ENST00000503742 PAX7P23759 505 aa20.47■□□□□ 0.87
UBE2D3-216ENST00000503742 PKLRP30613 574 aa20.47■□□□□ 0.87
UBE2D3-216ENST00000503742 TPMTP51580 245 aa20.47■□□□□ 0.87
UBE2D3-216ENST00000503742 PDE7AQ13946 482 aa20.47■□□□□ 0.87
UBE2D3-216ENST00000503742 FAM98BQ52LJ0 330 aaKnown RBP20.47■□□□□ 0.87
UBE2D3-216ENST00000503742 ANKRD53Q8N9V6 530 aa20.47■□□□□ 0.87
UBE2D3-216ENST00000503742 C16orf78Q8WTQ4 265 aa20.47■□□□□ 0.87
UBE2D3-216ENST00000503742 C9orf16Q9BUW7 83 aa20.47■□□□□ 0.87
UBE2D3-216ENST00000503742 UGT2B28Q9BY64 529 aa20.47■□□□□ 0.87
UBE2D3-216ENST00000503742 BHLHE41Q9C0J9 482 aaPredicted RBP20.47■□□□□ 0.87
UBE2D3-216ENST00000503742 MMP17Q9ULZ9 603 aa20.47■□□□□ 0.87
UBE2D3-216ENST00000503742 CREG1O75629 220 aa20.46■□□□□ 0.87
UBE2D3-216ENST00000503742 EPN2O95208 641 aa20.46■□□□□ 0.87
UBE2D3-216ENST00000503742 CPSF4O95639 269 aaKnown RBP20.46■□□□□ 0.87
UBE2D3-216ENST00000503742 LDLRP01130 860 aa20.46■□□□□ 0.87
UBE2D3-216ENST00000503742 GBAP04062 536 aa20.46■□□□□ 0.87
UBE2D3-216ENST00000503742 ZCCHC18P0CG32 403 aa20.46■□□□□ 0.87
UBE2D3-216ENST00000503742 ENGP17813 658 aa20.46■□□□□ 0.87
UBE2D3-216ENST00000503742 IGFBP4P22692 258 aa20.46■□□□□ 0.87
UBE2D3-216ENST00000503742 ZNF385BQ569K4 471 aa20.46■□□□□ 0.87
UBE2D3-216ENST00000503742 FAM71E1Q6IPT2 247 aa20.46■□□□□ 0.87
UBE2D3-216ENST00000503742 ZNF621Q6ZSS3 439 aa20.46■□□□□ 0.87
UBE2D3-216ENST00000503742 SLC9B2Q86UD5 537 aa20.46■□□□□ 0.87
UBE2D3-216ENST00000503742 CBR4Q8N4T8 237 aa20.46■□□□□ 0.87
UBE2D3-216ENST00000503742 FAM86B1Q8N7N1 296 aa20.46■□□□□ 0.87
UBE2D3-216ENST00000503742 VPS37AQ8NEZ2 397 aa20.46■□□□□ 0.87
UBE2D3-216ENST00000503742 OR2L8Q8NGY9 312 aa20.46■□□□□ 0.87
UBE2D3-216ENST00000503742 BMFQ96LC9 184 aa20.46■□□□□ 0.87
UBE2D3-216ENST00000503742 OR2M4Q96R27 311 aa20.46■□□□□ 0.87
UBE2D3-216ENST00000503742 RAB11FIP5Q9BXF6 653 aa20.46■□□□□ 0.87
UBE2D3-216ENST00000503742 PRDM8Q9NQV8 689 aa20.46■□□□□ 0.87
UBE2D3-216ENST00000503742 DCAF13Q9NV06 445 aaKnown RBP20.46■□□□□ 0.87
UBE2D3-216ENST00000503742 OAZ3Q9UMX2 235 aa20.46■□□□□ 0.87
UBE2D3-216ENST00000503742 PCDHB11Q9Y5F2 797 aa20.46■□□□□ 0.87
UBE2D3-216ENST00000503742 MYO10Q9HD67 2058 aa20.46■□□□□ 0.87
UBE2D3-216ENST00000503742 DPPA5A6NC42 116 aa20.46■□□□□ 0.87
UBE2D3-216ENST00000503742 OR52A4PA6NMU1 304 aa20.46■□□□□ 0.87
UBE2D3-216ENST00000503742 C10orf142B7Z368 130 aa20.46■□□□□ 0.87
UBE2D3-216ENST00000503742 H7BY64 318 aa20.46■□□□□ 0.87
UBE2D3-216ENST00000503742 RNASET2O00584 256 aaKnown RBP20.46■□□□□ 0.87
UBE2D3-216ENST00000503742 SEMA3DO95025 777 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms