RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 SNRPNP63162 240 aaKnown RBP17.33■□□□□ 0.36
PDLIM7-209ENST00000503346 PCDH1Q08174 1060 aa17.33■□□□□ 0.36
PDLIM7-209ENST00000503346 DSG2Q14126 1118 aa17.33■□□□□ 0.36
PDLIM7-209ENST00000503346 E2F2Q14209 437 aa17.33■□□□□ 0.36
PDLIM7-209ENST00000503346 RASA2Q15283 850 aa17.33■□□□□ 0.36
PDLIM7-209ENST00000503346 NKG7Q16617 165 aa17.33■□□□□ 0.36
PDLIM7-209ENST00000503346 PFKFB4Q16877 469 aa17.33■□□□□ 0.36
PDLIM7-209ENST00000503346 DEFB109BQ30KR1 87 aa17.33■□□□□ 0.36
PDLIM7-209ENST00000503346 FAM69BQ5VUD6 431 aa17.33■□□□□ 0.36
PDLIM7-209ENST00000503346 PRAMEF9Q5VWM5 478 aa17.33■□□□□ 0.36
PDLIM7-209ENST00000503346 LCA5Q86VQ0 697 aa17.33■□□□□ 0.36
PDLIM7-209ENST00000503346 ANKRD53Q8N9V6 530 aa17.33■□□□□ 0.36
PDLIM7-209ENST00000503346 NT5CQ8TCD5 201 aa17.33■□□□□ 0.36
PDLIM7-209ENST00000503346 ACMSDQ8TDX5 336 aa17.33■□□□□ 0.36
PDLIM7-209ENST00000503346 CAVIN3Q969G5 261 aa17.33■□□□□ 0.36
PDLIM7-209ENST00000503346 COL26A1Q96A83 441 aa17.33■□□□□ 0.36
PDLIM7-209ENST00000503346 MACROD1Q9BQ69 325 aa17.33■□□□□ 0.36
PDLIM7-209ENST00000503346 NT5DC2Q9H857 520 aa17.33■□□□□ 0.36
PDLIM7-209ENST00000503346 XPR1Q9UBH6 696 aa17.33■□□□□ 0.36
PDLIM7-209ENST00000503346 OPTCQ9UBM4 332 aa17.33■□□□□ 0.36
PDLIM7-209ENST00000503346 NXT1Q9UKK6 140 aaKnown RBP17.33■□□□□ 0.36
PDLIM7-209ENST00000503346 RALYQ9UKM9 306 aaKnown RBP17.33■□□□□ 0.36
PDLIM7-209ENST00000503346 MRPS2Q9Y399 296 aaKnown RBP17.33■□□□□ 0.36
PDLIM7-209ENST00000503346 PTRH2Q9Y3E5 179 aaKnown RBP17.33■□□□□ 0.36
PDLIM7-209ENST00000503346 HEATR5BQ9P2D3 2071 aa17.33■□□□□ 0.36
PDLIM7-209ENST00000503346 CHD6Q8TD26 2715 aa17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 IGLV3-12A0A075B6K2 115 aa17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 A0A0A6YYC8 382 aaPredicted RBP17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 VSTM2BA6NLU5 285 aa17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 H0YIG0 161 aa17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 I3L1I5 382 aaPredicted RBP17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 NDUFS4O43181 175 aa17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 ATXN8OSP0DMR3 200 aa17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 FBLP22087 321 aaKnown RBP17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 GSTM2P28161 218 aa17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 FOLR3P41439 243 aa17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 CASP2P42575 452 aa17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 SLBPQ14493 270 aaKnown RBP eCLIP17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 SSPNQ14714 243 aa17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 NAA30Q147X3 362 aaPredicted RBP17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 PCBP2Q15366 365 aaKnown RBP eCLIP17.32■□□□□ 0.361e-6■■■□□ 17
PDLIM7-209ENST00000503346 TBCCQ15814 346 aa17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 METTL2BQ6P1Q9 378 aaKnown RBP17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 KRT78Q8N1N4 520 aa17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 KCT2Q8NC54 265 aa17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 TRPV3Q8NET8 790 aa17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 SEC16BQ96JE7 1060 aa17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 SCYL1Q96KG9 808 aa17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 SPSB2Q99619 263 aa17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 MRPL57Q9BQC6 102 aaKnown RBP17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 PARD6BQ9BYG5 372 aa17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 MRPL46Q9H2W6 279 aaKnown RBP17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 CPSF2Q9P2I0 782 aaKnown RBP17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 CTSFQ9UBX1 484 aa17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 TBK1Q9UHD2 729 aa17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 RAB21Q9UL25 225 aa17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 TMCO1Q9UM00 188 aa17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 TNPO3Q9Y5L0 923 aaKnown RBP17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 SLC22A7Q9Y694 548 aa17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 SEC16AO15027 2179 aa17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 ANKRD12Q6UB98 2062 aa17.32■□□□□ 0.36
PDLIM7-209ENST00000503346 ZFYVE26Q68DK2 2539 aa17.31■□□□□ 0.36
PDLIM7-209ENST00000503346 NSA2O95478 260 aaKnown RBP17.31■□□□□ 0.36
PDLIM7-209ENST00000503346 UMODP07911 640 aa17.31■□□□□ 0.36
PDLIM7-209ENST00000503346 NUDT17P0C025 328 aa17.31■□□□□ 0.36
PDLIM7-209ENST00000503346 AVPR1BP47901 424 aa17.31■□□□□ 0.36
PDLIM7-209ENST00000503346 RGS1Q08116 209 aa17.31■□□□□ 0.36
PDLIM7-209ENST00000503346 RBBP5Q15291 538 aaKnown RBP17.31■□□□□ 0.36
PDLIM7-209ENST00000503346 XKR6Q5GH73 641 aa17.31■□□□□ 0.36
PDLIM7-209ENST00000503346 TMIGD1Q6UXZ0 262 aa17.31■□□□□ 0.36
PDLIM7-209ENST00000503346 RAB43Q86YS6 212 aa17.31■□□□□ 0.36
PDLIM7-209ENST00000503346 TMEM151AQ8N4L1 468 aa17.31■□□□□ 0.36
PDLIM7-209ENST00000503346 AFAP1L2Q8N4X5 818 aa17.31■□□□□ 0.36
PDLIM7-209ENST00000503346 AMER3Q8N944 861 aa17.31■□□□□ 0.36
PDLIM7-209ENST00000503346 TTLQ8NG68 377 aa17.31■□□□□ 0.36
PDLIM7-209ENST00000503346 APOBEC4Q8WW27 367 aaKnown RBP17.31■□□□□ 0.36
PDLIM7-209ENST00000503346 MOCOSQ96EN8 888 aa17.31■□□□□ 0.36
PDLIM7-209ENST00000503346 PTCD3Q96EY7 689 aaKnown RBP17.31■□□□□ 0.36
PDLIM7-209ENST00000503346 MMABQ96EY8 250 aaPredicted RBP17.31■□□□□ 0.36
PDLIM7-209ENST00000503346 BBC3Q96PG8 261 aaPredicted RBP17.31■□□□□ 0.36
PDLIM7-209ENST00000503346 EFCAB11Q9BUY7 163 aa17.31■□□□□ 0.36
PDLIM7-209ENST00000503346 ZNF282Q9UDV7 671 aaPredicted RBP17.31■□□□□ 0.36
PDLIM7-209ENST00000503346 KCNMB2Q9Y691 235 aa17.31■□□□□ 0.36
PDLIM7-209ENST00000503346 TK2O00142 265 aa17.3■□□□□ 0.36
PDLIM7-209ENST00000503346 WFS1O76024 890 aa17.3■□□□□ 0.36
PDLIM7-209ENST00000503346 TUBBP07437 444 aa17.3■□□□□ 0.36
PDLIM7-209ENST00000503346 SERPINA6P08185 405 aa17.3■□□□□ 0.36
PDLIM7-209ENST00000503346 EPB42P16452 691 aa17.3■□□□□ 0.36
PDLIM7-209ENST00000503346 CD22P20273 847 aa17.3■□□□□ 0.36
PDLIM7-209ENST00000503346 CCR10P46092 362 aa17.3■□□□□ 0.36
PDLIM7-209ENST00000503346 SLCO1A2P46721 670 aa17.3■□□□□ 0.36
PDLIM7-209ENST00000503346 FOXL2P58012 376 aa17.3■□□□□ 0.36
PDLIM7-209ENST00000503346 IRF8Q02556 426 aa17.3■□□□□ 0.36
PDLIM7-209ENST00000503346 OCA2Q04671 838 aa17.3■□□□□ 0.36
PDLIM7-209ENST00000503346 LAPTM5Q13571 262 aa17.3■□□□□ 0.36
PDLIM7-209ENST00000503346 DOC2AQ14183 400 aa17.3■□□□□ 0.36
PDLIM7-209ENST00000503346 SOWAHCQ53LP3 525 aaPredicted RBP17.3■□□□□ 0.36
PDLIM7-209ENST00000503346 PAGE2BQ5JRK9 111 aa17.3■□□□□ 0.36
PDLIM7-209ENST00000503346 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.3■□□□□ 0.36
PDLIM7-209ENST00000503346 TEX9Q8N6V9 391 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms