RNA–Protein interactions for RNA: ENST00000503139.5

EXOSC9-203, Transcript of exosome component 9, humanhuman

TSL 1 (best)

Gene EXOSC9, Length 1,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-203ENST00000503139 PSD2Q9BQI7 771 aa7.42□□□□□ -1.22
EXOSC9-203ENST00000503139 LLPHQ9BRT6 129 aaKnown RBP7.42□□□□□ -1.22
EXOSC9-203ENST00000503139 MIS12Q9H081 205 aa7.42□□□□□ -1.22
EXOSC9-203ENST00000503139 ZSCAN16Q9H4T2 348 aaPredicted RBP7.42□□□□□ -1.22
EXOSC9-203ENST00000503139 SDR39U1Q9NRG7 319 aaPredicted RBP7.42□□□□□ -1.22
EXOSC9-203ENST00000503139 GSN-AS1Q9NRJ2 163 aa7.42□□□□□ -1.22
EXOSC9-203ENST00000503139 DONSONQ9NYP3 566 aa7.42□□□□□ -1.22
EXOSC9-203ENST00000503139 NPHP3Q7Z494 1330 aa7.42□□□□□ -1.22
EXOSC9-203ENST00000503139 LAMA4Q16363 1823 aa7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 A0A0D9SFI3 127 aa7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 LOC101059948A0A1B0GTJ6 334 aa7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 OOEPA6NGQ2 149 aa7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 SELENOFO60613 162 aa7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 PGLSO95336 258 aa7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 IGHV4-38-2P0DP08 117 aa7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 LIFP15018 202 aa7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 LBPP18428 481 aa7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 EFNA1P20827 205 aaPredicted RBP7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 CD27P26842 260 aa7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 RPL21P46778 160 aaKnown RBP7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 ARL16Q0P5N6 197 aa7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 TAF10Q12962 218 aa7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 ANKRD20A4Q4UJ75 823 aa7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 ANKRD20A8PQ5CZ79 823 aa7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 SLC10A5Q5PT55 438 aa7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 ANKRD20A2Q5SQ80 823 aa7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 ANKRD20A1Q5TYW2 823 aa7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 ANKRD20A3Q5VUR7 823 aa7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 ATL3Q6DD88 541 aa7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 SMIM29Q86T20 159 aa7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 DZIP1Q86YF9 867 aaKnown RBP7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 PHLDA1Q8WV24 401 aaPredicted RBP7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 PARK7Q99497 189 aaKnown RBP7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 TRMT61BQ9BVS5 477 aaKnown RBP7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 PRRG4Q9BZD6 226 aa7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 DNAI2Q9GZS0 605 aa7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 BOLA2Q9H3K6 86 aa7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 KIF3AQ9Y496 699 aa7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 SH3TC1Q8TE82 1336 aa7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 PALLDQ8WX93 1383 aa7.41□□□□□ -1.22
EXOSC9-203ENST00000503139 ARPC2O15144 300 aa7.4□□□□□ -1.22
EXOSC9-203ENST00000503139 SLC22A2O15244 555 aa7.4□□□□□ -1.22
EXOSC9-203ENST00000503139 PRKRAO75569 313 aaKnown RBP7.4□□□□□ -1.22
EXOSC9-203ENST00000503139 LUC7L3O95232 432 aaKnown RBP7.4□□□□□ -1.22
EXOSC9-203ENST00000503139 VDRP11473 427 aa7.4□□□□□ -1.22
EXOSC9-203ENST00000503139 PAX1P15863 534 aa7.4□□□□□ -1.22
EXOSC9-203ENST00000503139 PSMB4P28070 264 aa7.4□□□□□ -1.22
EXOSC9-203ENST00000503139 POU3F1Q03052 451 aaPredicted RBP7.4□□□□□ -1.22
EXOSC9-203ENST00000503139 ACCSLQ4AC99 568 aa7.4□□□□□ -1.22
EXOSC9-203ENST00000503139 LINC00696Q6ZRV3 163 aa7.4□□□□□ -1.22
EXOSC9-203ENST00000503139 SNX32Q86XE0 403 aa7.4□□□□□ -1.22
EXOSC9-203ENST00000503139 KLHL7Q8IXQ5 586 aa7.4□□□□□ -1.22
EXOSC9-203ENST00000503139 DNAJC22Q8N4W6 341 aa7.4□□□□□ -1.22
EXOSC9-203ENST00000503139 NECAB1Q8N987 351 aa7.4□□□□□ -1.22
EXOSC9-203ENST00000503139 KLHDC9Q8NEP7 349 aa7.4□□□□□ -1.22
EXOSC9-203ENST00000503139 OR10Q1Q8NGQ4 319 aa7.4□□□□□ -1.22
EXOSC9-203ENST00000503139 GRK7Q8WTQ7 553 aa7.4□□□□□ -1.22
EXOSC9-203ENST00000503139 CLSTN2Q9H4D0 955 aa7.4□□□□□ -1.22
EXOSC9-203ENST00000503139 MINDY3Q9H8M7 445 aa7.4□□□□□ -1.22
EXOSC9-203ENST00000503139 ARMCX3Q9UH62 379 aaPredicted RBP7.4□□□□□ -1.22
EXOSC9-203ENST00000503139 ITGA11Q9UKX5 1188 aa7.4□□□□□ -1.22
EXOSC9-203ENST00000503139 CFAP45Q9UL16 551 aa7.4□□□□□ -1.22
EXOSC9-203ENST00000503139 GLI3P10071 1580 aa7.4□□□□□ -1.22
EXOSC9-203ENST00000503139 NUP188Q5SRE5 1749 aa7.4□□□□□ -1.23
EXOSC9-203ENST00000503139 UBR2Q8IWV8 1755 aa7.39□□□□□ -1.23
EXOSC9-203ENST00000503139 AFF2P51816 1311 aa7.39□□□□□ -1.23
EXOSC9-203ENST00000503139 A0A1W2PPW3 197 aa7.39□□□□□ -1.23
EXOSC9-203ENST00000503139 GOLGA6L4A6NEF3 574 aa7.39□□□□□ -1.23
EXOSC9-203ENST00000503139 ANKRD61A6NGH8 418 aa7.39□□□□□ -1.23
EXOSC9-203ENST00000503139 CTAGE5O15320 804 aa7.39□□□□□ -1.23
EXOSC9-203ENST00000503139 PRAF2O60831 178 aa7.39□□□□□ -1.23
EXOSC9-203ENST00000503139 OAS2P29728 719 aaKnown RBP7.39□□□□□ -1.23
EXOSC9-203ENST00000503139 KCNJ1P48048 391 aa7.39□□□□□ -1.23
EXOSC9-203ENST00000503139 VAMP7P51809 220 aa7.39□□□□□ -1.23
EXOSC9-203ENST00000503139 ZNF672Q499Z4 452 aaPredicted RBP7.39□□□□□ -1.23
EXOSC9-203ENST00000503139 GBP6Q6ZN66 633 aa7.39□□□□□ -1.23
EXOSC9-203ENST00000503139 COPS6Q7L5N1 327 aa7.39□□□□□ -1.23
EXOSC9-203ENST00000503139 RTN4RL2Q86UN3 420 aa7.39□□□□□ -1.23
EXOSC9-203ENST00000503139 HOOK3Q86VS8 718 aa7.39□□□□□ -1.23
EXOSC9-203ENST00000503139 CCDC170Q8IYT3 715 aa7.39□□□□□ -1.23
EXOSC9-203ENST00000503139 LGI2Q8N0V4 545 aa7.39□□□□□ -1.23
EXOSC9-203ENST00000503139 NUP93Q8N1F7 819 aa7.39□□□□□ -1.23
EXOSC9-203ENST00000503139 ZNF843Q8N446 348 aa7.39□□□□□ -1.23
EXOSC9-203ENST00000503139 OR52N5Q8NH56 324 aa7.39□□□□□ -1.23
EXOSC9-203ENST00000503139 RIT1Q92963 219 aa7.39□□□□□ -1.23
EXOSC9-203ENST00000503139 PTP4A1Q93096 173 aa7.39□□□□□ -1.23
EXOSC9-203ENST00000503139 RHNO1Q9BSD3 238 aa7.39□□□□□ -1.23
EXOSC9-203ENST00000503139 FUT8Q9BYC5 575 aa7.39□□□□□ -1.23
EXOSC9-203ENST00000503139 TNMDQ9H2S6 317 aa7.39□□□□□ -1.23
EXOSC9-203ENST00000503139 TRPV4Q9HBA0 871 aa7.39□□□□□ -1.23
EXOSC9-203ENST00000503139 FGF21Q9NSA1 209 aa7.39□□□□□ -1.23
EXOSC9-203ENST00000503139 STUB1Q9UNE7 303 aa7.39□□□□□ -1.23
EXOSC9-203ENST00000503139 EP400Q96L91 3159 aa7.38□□□□□ -1.23
EXOSC9-203ENST00000503139 TJP1Q07157 1748 aa7.38□□□□□ -1.23
EXOSC9-203ENST00000503139 PAPPAQ13219 1627 aa7.38□□□□□ -1.23
EXOSC9-203ENST00000503139 COL22A1Q8NFW1 1626 aaPredicted RBP7.38□□□□□ -1.23
EXOSC9-203ENST00000503139 MEGF6O75095 1541 aa7.38□□□□□ -1.23
EXOSC9-203ENST00000503139 ZNF609O15014 1411 aa7.38□□□□□ -1.23
EXOSC9-203ENST00000503139 YDJCA8MPS7 323 aa7.38□□□□□ -1.23
EXOSC9-203ENST00000503139 ST8SIA3O43173 380 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms