RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 VAPAQ9P0L0 249 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 MBD1Q9UIS9 605 aaPredicted RBP5□□□□□ -1.61
CLDND1-208ENST00000503004 LEF1Q9UJU2 399 aaPredicted RBP5□□□□□ -1.61
CLDND1-208ENST00000503004 PNMA8BQ9ULN7 279 aaPredicted RBP5□□□□□ -1.61
CLDND1-208ENST00000503004 SCML1Q9UN30 329 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 DHRS7Q9Y394 339 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 OR51B4Q9Y5P0 310 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 STON1Q9Y6Q2 735 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 TANC1Q9C0D5 1861 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 KIAA0100Q14667 2235 aaKnown RBP5□□□□□ -1.61
CLDND1-208ENST00000503004 TRAV20A0A0B4J274 112 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 TCRBV5S2A0A599 114 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 TAPBPO15533 448 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 TBX1O43435 398 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 BCAS1O75363 584 aaPredicted RBP5□□□□□ -1.61
CLDND1-208ENST00000503004 DEAF1O75398 565 aaPredicted RBP5□□□□□ -1.61
CLDND1-208ENST00000503004 PPM1BO75688 479 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 PGLSO95336 258 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 SNAP29O95721 258 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 CPNE6O95741 557 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 CKMP06732 381 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 SLC2A4P14672 509 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 EPB42P16452 691 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 ZNF7P17097 686 aaPredicted RBP5□□□□□ -1.61
CLDND1-208ENST00000503004 BPIP17213 487 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 PSMA3P25788 255 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 STK19P49842 368 aaPredicted RBP5□□□□□ -1.61
CLDND1-208ENST00000503004 RELQ04864 619 aaPredicted RBP5□□□□□ -1.61
CLDND1-208ENST00000503004 MERTKQ12866 999 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 PPP1R8Q12972 351 aaKnown RBP5□□□□□ -1.61
CLDND1-208ENST00000503004 TRAF3Q13114 568 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 NOGQ13253 232 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 ANKRD39Q53RE8 183 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 COQ5Q5HYK3 327 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 CACHD1Q5VU97 1274 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 GARNL3Q5VVW2 1013 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 TBPL2Q6SJ96 375 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 DLEU7Q6UYE1 221 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 RFLNAQ6ZTI6 216 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 MILR1Q7Z6M3 343 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 ZFAND4Q86XD8 727 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 LACC1Q8IV20 430 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 BBS7Q8IWZ6 715 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 SLC22A15Q8IZD6 547 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 DTWD1Q8N5C7 304 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 FAM86B1Q8N7N1 296 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 WDR48Q8TAF3 677 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 S100ZQ8WXG8 99 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 MYLIPQ8WY64 445 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 NELL1Q92832 810 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 CENPNQ96H22 339 aaPredicted RBP5□□□□□ -1.61
CLDND1-208ENST00000503004 NUSAP1Q9BXS6 441 aaKnown RBP5□□□□□ -1.61
CLDND1-208ENST00000503004 PRRG3Q9BZD7 231 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 ASPSCR1Q9BZE9 553 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 TINAGL1Q9GZM7 467 aaPredicted RBP5□□□□□ -1.61
CLDND1-208ENST00000503004 CCDC90BQ9GZT6 254 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 SMG9Q9H0W8 520 aaKnown RBP5□□□□□ -1.61
CLDND1-208ENST00000503004 IKZF5Q9H5V7 419 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 LTB4R2Q9NPC1 389 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 DIABLOQ9NR28 239 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 IFT80Q9P2H3 777 aaPredicted RBP5□□□□□ -1.61
CLDND1-208ENST00000503004 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5□□□□□ -1.61
CLDND1-208ENST00000503004 GMPPBQ9Y5P6 360 aa5□□□□□ -1.61
CLDND1-208ENST00000503004 ANAPC1Q9H1A4 1944 aa4.99□□□□□ -1.61
CLDND1-208ENST00000503004 FAM234BA2RU67 622 aa4.99□□□□□ -1.61
CLDND1-208ENST00000503004 ISPDA4D126 451 aa4.99□□□□□ -1.61
CLDND1-208ENST00000503004 NPIPB15A6NHN6 443 aaPredicted RBP4.99□□□□□ -1.61
CLDND1-208ENST00000503004 HMX3A6NHT5 357 aa4.99□□□□□ -1.61
CLDND1-208ENST00000503004 PTGES3LE9PB15 166 aa4.99□□□□□ -1.61
CLDND1-208ENST00000503004 PITPNM1O00562 1244 aa4.99□□□□□ -1.61
CLDND1-208ENST00000503004 ANKRD28O15084 1053 aa4.99□□□□□ -1.61
CLDND1-208ENST00000503004 SSX4O60224 188 aa4.99□□□□□ -1.61
CLDND1-208ENST00000503004 DFNA5O60443 496 aa4.99□□□□□ -1.61
CLDND1-208ENST00000503004 CPNE3O75131 537 aaKnown RBP4.99□□□□□ -1.61
CLDND1-208ENST00000503004 SEC14L2O76054 403 aa4.99□□□□□ -1.61
CLDND1-208ENST00000503004 EFEMP2O95967 443 aa4.99□□□□□ -1.61
CLDND1-208ENST00000503004 B3GALT4O96024 378 aa4.99□□□□□ -1.61
CLDND1-208ENST00000503004 TRBC1P01850 177 aa4.99□□□□□ -1.61
CLDND1-208ENST00000503004 IFNA16P05015 189 aa4.99□□□□□ -1.61
CLDND1-208ENST00000503004 GSNP06396 782 aa4.99□□□□□ -1.61
CLDND1-208ENST00000503004 HOXD4P09016 255 aaPredicted RBP4.99□□□□□ -1.61
CLDND1-208ENST00000503004 ZNF3P17036 446 aa4.99□□□□□ -1.61
CLDND1-208ENST00000503004 CYP2A7P20853 494 aa4.99□□□□□ -1.61
CLDND1-208ENST00000503004 GTF2E2P29084 291 aaKnown RBP4.99□□□□□ -1.61
CLDND1-208ENST00000503004 CD70P32970 193 aa4.99□□□□□ -1.61
CLDND1-208ENST00000503004 RFC2P35250 354 aa4.99□□□□□ -1.61
CLDND1-208ENST00000503004 TGFBR1P36897 503 aa4.99□□□□□ -1.61
CLDND1-208ENST00000503004 EIF2DP41214 584 aaKnown RBP4.99□□□□□ -1.61
CLDND1-208ENST00000503004 CTSOP43234 321 aaPredicted RBP4.99□□□□□ -1.61
CLDND1-208ENST00000503004 PLA2G16P53816 162 aa4.99□□□□□ -1.61
CLDND1-208ENST00000503004 BPIFB3P59826 476 aa4.99□□□□□ -1.61
CLDND1-208ENST00000503004 GUCA2AQ02747 115 aa4.99□□□□□ -1.61
CLDND1-208ENST00000503004 BCL2L1Q07817 233 aa4.99□□□□□ -1.61
CLDND1-208ENST00000503004 ARHGEF7Q14155 803 aa4.99□□□□□ -1.61
CLDND1-208ENST00000503004 ZNF267Q14586 743 aaPredicted RBP4.99□□□□□ -1.61
CLDND1-208ENST00000503004 VEPH1Q14D04 833 aa4.99□□□□□ -1.61
CLDND1-208ENST00000503004 CHRNA6Q15825 494 aa4.99□□□□□ -1.61
CLDND1-208ENST00000503004 CPSF6Q16630 551 aaKnown RBP eCLIP4.99□□□□□ -1.61
CLDND1-208ENST00000503004 IMPG1Q17R60 797 aa4.99□□□□□ -1.61
CLDND1-208ENST00000503004 FAM174BQ3ZCQ3 159 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms