RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 KLHL4Q9C0H6 718 aa21.11■□□□□ 0.97
PTPN13-205ENST00000502971 COPS7BQ9H9Q2 264 aaPredicted RBP21.11■□□□□ 0.97
PTPN13-205ENST00000502971 C2orf42Q9NWW7 574 aa21.11■□□□□ 0.97
PTPN13-205ENST00000502971 MCM8Q9UJA3 840 aa21.11■□□□□ 0.97
PTPN13-205ENST00000502971 RIMS3Q9UJD0 308 aa21.11■□□□□ 0.97
PTPN13-205ENST00000502971 PNMA8BQ9ULN7 279 aaPredicted RBP21.11■□□□□ 0.97
PTPN13-205ENST00000502971 PCDHB14Q9Y5E9 798 aa21.11■□□□□ 0.97
PTPN13-205ENST00000502971 PEX1O43933 1283 aa21.1■□□□□ 0.97
PTPN13-205ENST00000502971 SEMA3DO95025 777 aa21.1■□□□□ 0.97
PTPN13-205ENST00000502971 CCNDBP1O95273 360 aa21.1■□□□□ 0.97
PTPN13-205ENST00000502971 ACADSP16219 412 aa21.1■□□□□ 0.97
PTPN13-205ENST00000502971 HOXB9P17482 250 aaPredicted RBP21.1■□□□□ 0.97
PTPN13-205ENST00000502971 CSNK1G2P78368 415 aa21.1■□□□□ 0.97
PTPN13-205ENST00000502971 DUOXA1Q1HG43 343 aa21.1■□□□□ 0.97
PTPN13-205ENST00000502971 HKDC1Q2TB90 917 aa21.1■□□□□ 0.97
PTPN13-205ENST00000502971 CDC26Q8NHZ8 85 aa21.1■□□□□ 0.97
PTPN13-205ENST00000502971 FAM174AQ8TBP5 190 aa21.1■□□□□ 0.97
PTPN13-205ENST00000502971 MAGEL2Q9UJ55 1249 aa21.1■□□□□ 0.97
PTPN13-205ENST00000502971 A6NCN8 305 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 RFXANKO14593 260 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 SCN2BO60939 215 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 SLC34A2O95436 690 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 EML2O95834 649 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 RPL3P39023 403 aaKnown RBP21.09■□□□□ 0.97
PTPN13-205ENST00000502971 WNT3P56703 355 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 CPTPQ5TA50 214 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 OGFRL1Q5TC84 451 aaPredicted RBP21.09■□□□□ 0.97
PTPN13-205ENST00000502971 SLC30A9Q6PML9 568 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 SLC9B2Q86UD5 537 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 ANKRD46Q86W74 232 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 ANKRD53Q8N9V6 530 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 CCL4L1Q8NHW4 92 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.09■□□□□ 0.97
PTPN13-205ENST00000502971 SLCO4A1Q96BD0 722 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 COQ8BQ96D53 544 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 NAF1Q96HR8 494 aaKnown RBP21.09■□□□□ 0.97
PTPN13-205ENST00000502971 ZNF583Q96ND8 569 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 INPP5KQ9BT40 448 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 DUSP26Q9BV47 211 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 MRPS30Q9NP92 439 aaKnown RBP21.09■□□□□ 0.97
PTPN13-205ENST00000502971 ARMC1Q9NVT9 282 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 OR6C2Q9NZP2 312 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 ATP6V1HQ9UI12 483 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.09■□□□□ 0.97
PTPN13-205ENST00000502971 A0A1W2PPC4 97 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 FAM170BA6NMN3 283 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 GABRR3A8MPY1 467 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 F3P13726 295 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 ATP6V1C1P21283 382 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 PTPN6P29350 595 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 OR4D2P58180 307 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 LRRC74AQ0VAA2 488 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 ILF3Q12906 894 aaKnown RBP eCLIP21.09■□□□□ 0.97
PTPN13-205ENST00000502971 DEPDC1Q5TB30 811 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 ANXA8L1Q5VT79 327 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 KHDRBS2Q5VWX1 349 aaKnown RBP21.09■□□□□ 0.97
PTPN13-205ENST00000502971 LPCAT4Q643R3 524 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 DNAJC14Q6Y2X3 702 aaPredicted RBP21.09■□□□□ 0.97
PTPN13-205ENST00000502971 R3HCC1LQ7Z5L2 792 aaKnown RBP21.09■□□□□ 0.97
PTPN13-205ENST00000502971 SIX5Q8N196 739 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 VPS37AQ8NEZ2 397 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 TTLQ8NG68 377 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 WDR48Q8TAF3 677 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 CCDC115Q96NT0 180 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 PKP2Q99959 881 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 CPPED1Q9BRF8 314 aaPredicted RBP21.09■□□□□ 0.97
PTPN13-205ENST00000502971 MS4A8Q9BY19 250 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 MYNNQ9NPC7 610 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 GPR27Q9NS67 375 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 CCM2LQ9NUG4 571 aaPredicted RBP21.09■□□□□ 0.97
PTPN13-205ENST00000502971 TMEM184CQ9NVA4 438 aa21.09■□□□□ 0.97
PTPN13-205ENST00000502971 ZNF624Q9P2J8 865 aaPredicted RBP21.09■□□□□ 0.97
PTPN13-205ENST00000502971 IGHV1OR15-9A0A0B4J2B8 117 aa21.08■□□□□ 0.97
PTPN13-205ENST00000502971 PRAMEF33A0A0G2JMD5 474 aa21.08■□□□□ 0.97
PTPN13-205ENST00000502971 SAP18O00422 153 aaKnown RBP21.08■□□□□ 0.97
PTPN13-205ENST00000502971 GPIP06744 558 aa21.08■□□□□ 0.97
PTPN13-205ENST00000502971 UMPSP11172 480 aa21.08■□□□□ 0.97
PTPN13-205ENST00000502971 HRH2P25021 359 aa21.08■□□□□ 0.97
PTPN13-205ENST00000502971 PEX2P28328 305 aa21.08■□□□□ 0.97
PTPN13-205ENST00000502971 MAP7Q14244 749 aa21.08■□□□□ 0.97
PTPN13-205ENST00000502971 GTDC1Q4AE62 458 aa21.08■□□□□ 0.97
PTPN13-205ENST00000502971 AMIGO1Q86WK6 493 aa21.08■□□□□ 0.97
PTPN13-205ENST00000502971 NRROSQ86YC3 692 aa21.08■□□□□ 0.97
PTPN13-205ENST00000502971 KBTBD2Q8IY47 623 aa21.08■□□□□ 0.97
PTPN13-205ENST00000502971 LILRA2Q8N149 483 aa21.08■□□□□ 0.97
PTPN13-205ENST00000502971 SLC22A18ASQ8N1D0 253 aa21.08■□□□□ 0.97
PTPN13-205ENST00000502971 CATSPER1Q8NEC5 780 aa21.08■□□□□ 0.97
PTPN13-205ENST00000502971 OR2T12Q8NG77 320 aa21.08■□□□□ 0.97
PTPN13-205ENST00000502971 C16orf78Q8WTQ4 265 aa21.08■□□□□ 0.97
PTPN13-205ENST00000502971 LCN9Q8WX39 176 aa21.08■□□□□ 0.97
PTPN13-205ENST00000502971 SNX19Q92543 992 aa21.08■□□□□ 0.97
PTPN13-205ENST00000502971 REEP4Q9H6H4 257 aa21.08■□□□□ 0.97
PTPN13-205ENST00000502971 SLC6A13Q9NSD5 602 aa21.08■□□□□ 0.97
PTPN13-205ENST00000502971 BTNL2Q9UIR0 455 aa21.08■□□□□ 0.97
PTPN13-205ENST00000502971 IGKV1-8A0A0C4DH67 115 aa21.07■□□□□ 0.96
PTPN13-205ENST00000502971 TRBC2A0A5B9 178 aa21.07■□□□□ 0.96
PTPN13-205ENST00000502971 DHRS12A0PJE2 317 aa21.07■□□□□ 0.96
PTPN13-205ENST00000502971 FEZF1A0PJY2 475 aa21.07■□□□□ 0.96
PTPN13-205ENST00000502971 OR1F1O43749 312 aa21.07■□□□□ 0.96
PTPN13-205ENST00000502971 KLK1P06870 262 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms