RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 CYTH2Q99418 400 aa11.12□□□□□ -0.63
NUDCD3-211ENST00000497978 MACROD1Q9BQ69 325 aa11.12□□□□□ -0.63
NUDCD3-211ENST00000497978 ARL15Q9NXU5 204 aa11.12□□□□□ -0.63
NUDCD3-211ENST00000497978 STMN3Q9NZ72 180 aa11.12□□□□□ -0.63
NUDCD3-211ENST00000497978 HCN3Q9P1Z3 774 aa11.12□□□□□ -0.63
NUDCD3-211ENST00000497978 SNX12Q9UMY4 172 aa11.12□□□□□ -0.63
NUDCD3-211ENST00000497978 POLEQ07864 2286 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 ZGRF1Q86YA3 2104 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 FEZF1A0PJY2 475 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 OR5H15A6NDH6 313 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 A8MUI8 341 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 SGK494L7N484 410 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 SEC24DO94855 1032 aaPredicted RBP11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 RASAL1O95294 804 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 F10P00742 488 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 CRYABP02511 175 aaKnown RBP11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 AHSGP02765 367 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 STSP08842 583 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 CDH1P12830 882 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 IL10P22301 178 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 BCL6P41182 706 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 CCR8P51685 355 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 CDKN2DP55273 166 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 AP1S2P56377 157 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 SKP1P63208 163 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 TIAL1Q01085 375 aaKnown RBP eCLIP11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 ZNF33BQ06732 778 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 HERC3Q15034 1050 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 BTBD16Q32M84 506 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 BBS9Q3SYG4 887 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 RBM20Q5T481 1227 aaKnown RBP11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 DUPD1Q68J44 220 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 ZNF787Q6DD87 383 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 PLAG1Q6DJT9 500 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 MBOAT1Q6ZNC8 495 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 PRSS41Q7RTY9 318 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 GALNT7Q86SF2 657 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 SLC26A11Q86WA9 606 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 CNTN4Q8IWV2 1026 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 PDIK1LQ8N165 341 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 GPATCH11Q8N954 259 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 MFSD9Q8NBP5 474 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 DNAJB8Q8NHS0 232 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 ZCCHC10Q8TBK6 192 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 ATL1Q8WXF7 558 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 NR4A3Q92570 626 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 TM4SF19Q96DZ7 209 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 CERS2Q96G23 380 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 SGPP1Q9BX95 441 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 DDX47Q9H0S4 455 aaKnown RBP11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 ABI3Q9P2A4 366 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 CORO1CQ9ULV4 474 aaPredicted RBP11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 SLC22A7Q9Y694 548 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 SVILO95425 2214 aa11.11□□□□□ -0.63
NUDCD3-211ENST00000497978 PRRC2CQ9Y520 2896 aaKnown RBP11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 IGHV3-20A0A0C4DH32 117 aa11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 PRAMEF2O60811 474 aa11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 BANF1O75531 89 aa11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 NPPBP16860 134 aa11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 GABRB3P28472 473 aa11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 ACTN3Q08043 901 aaPredicted RBP11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 ZRSR2Q15696 482 aaKnown RBP11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 EXT1Q16394 746 aa11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 PHKG1Q16816 387 aa11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 HECTD2Q5U5R9 776 aa11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 ZNF324BQ6AW86 544 aaPredicted RBP11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 FAM45BPQ6NSW5 357 aa11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 NIPAL1Q6NVV3 410 aa11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 GFRALQ6UXV0 394 aa11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 LANCL3Q6ZV70 420 aa11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 ANKRD37Q7Z713 158 aa11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 FJX1Q86VR8 437 aa11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 LURAP1LQ8IV03 231 aa11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 SLC34A3Q8N130 599 aa11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 KCT2Q8NC54 265 aa11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 ABHD11Q8NFV4 315 aa11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 FAM45AQ8TCE6 357 aa11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 SLCO2A1Q92959 643 aa11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 ZNF354BQ96LW1 612 aa11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 OR1F2PQ96R84 312 aa11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 TAAR6Q96RI8 345 aa11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 KCNK13Q9HB14 408 aa11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 SH2B3Q9UQQ2 575 aa11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 NAALAD2Q9Y3Q0 740 aa11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 CPAMD8Q8IZJ3 1885 aa11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 DOPEY1Q5JWR5 2465 aa11.1□□□□□ -0.63
NUDCD3-211ENST00000497978 SCN3AQ9NY46 2000 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 NDUFS4O43181 175 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 OR1F1O43749 312 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 LCMT2O60294 686 aaKnown RBP11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 RDH16O75452 317 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 SERPIND1P05546 499 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 ENO2P09104 434 aaPredicted RBP11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 TCP1P17987 556 aaKnown RBP11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 TDGF1P3P51864 188 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 EFNA3P52797 238 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 KCNK10P57789 538 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 SNRPNP63162 240 aaKnown RBP11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 RGS1Q08116 209 aa11.09□□□□□ -0.63
NUDCD3-211ENST00000497978 PWP1Q13610 501 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms