RNA–Protein interactions for RNA: ENST00000497730.1

TRA2A-210, Transcript of transformer 2 alpha homolog, human

TSL 3

Gene TRA2A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2A-210	ENST00000497730	PRKACG	P22612	351 aa		4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	RBMS1	P29558	406 aa	Known RBP	4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	HLA-F	P30511	346 aa		4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	KCNJ1	P48048	391 aa		4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	ZNF542P	Q5EBM4	170 aa		4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	NHSL2	Q5HYW2	709 aa		4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	CES4A	Q5XG92	561 aa		4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	CASC4	Q6P4E1	433 aa		4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	PRSS55	Q6UWB4	352 aa	Predicted RBP	4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	CHMP1B	Q7LBR1	199 aa		4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	GPR141	Q7Z602	305 aa		4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	PRUNE1	Q86TP1	453 aa		4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	TICAM2	Q86XR7	235 aa		4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	PRSS35	Q8N3Z0	413 aa		4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	NHLRC2	Q8NBF2	726 aa		4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	UXS1	Q8NBZ7	420 aa		4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	OR5T2	Q8NGG2	359 aa		4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	ZNF599	Q96NL3	588 aa		4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	SYT11	Q9BT88	431 aa		4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	MCRIP2	Q9BUT9	160 aa	Known RBP	4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	GFRA4	Q9GZZ7	299 aa		4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	IARS2	Q9NSE4	1012 aa	Known RBP	4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	AGTPBP1	Q9UPW5	1226 aa		4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	PA2G4	Q9UQ80	394 aa	Known RBP	4.88	□□□□□ -1.63
TRA2A-210	ENST00000497730	NDUFAF8	A1L188	74 aa		4.87	□□□□□ -1.63
TRA2A-210	ENST00000497730		A8MVM7	634 aa		4.87	□□□□□ -1.63
TRA2A-210	ENST00000497730	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	4.87	□□□□□ -1.63
TRA2A-210	ENST00000497730	NPIPA3	F8WFD2	350 aa		4.87	□□□□□ -1.63
TRA2A-210	ENST00000497730	SERPINB2	P05120	415 aa		4.87	□□□□□ -1.63
TRA2A-210	ENST00000497730	ZSCAN5DP	P0CG00	497 aa		4.87	□□□□□ -1.63
TRA2A-210	ENST00000497730	DPEP1	P16444	411 aa		4.87	□□□□□ -1.63
TRA2A-210	ENST00000497730	LUM	P51884	338 aa	Predicted RBP	4.87	□□□□□ -1.63
TRA2A-210	ENST00000497730	OR1D5	P58170	312 aa		4.87	□□□□□ -1.63
TRA2A-210	ENST00000497730	CYCS	P99999	105 aa	Known RBP	4.87	□□□□□ -1.63
TRA2A-210	ENST00000497730	TRA2A	Q13595	282 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
TRA2A-210	ENST00000497730	FCN2	Q15485	313 aa		4.87	□□□□□ -1.63
TRA2A-210	ENST00000497730	DUSP5	Q16690	384 aa		4.87	□□□□□ -1.63
TRA2A-210	ENST00000497730	CATSPERD	Q86XM0	798 aa		4.87	□□□□□ -1.63
TRA2A-210	ENST00000497730	MEX3D	Q86XN8	651 aa	Known RBP	4.87	□□□□□ -1.63
TRA2A-210	ENST00000497730	FAM218A	Q96MZ4	157 aa		4.87	□□□□□ -1.63
TRA2A-210	ENST00000497730	JAKMIP1	Q96N16	626 aa	Known RBP	4.87	□□□□□ -1.63
TRA2A-210	ENST00000497730	ZNF300	Q96RE9	604 aa	Predicted RBP	4.87	□□□□□ -1.63
TRA2A-210	ENST00000497730	FGFBP2	Q9BYJ0	223 aa		4.87	□□□□□ -1.63
TRA2A-210	ENST00000497730	HOXD1	Q9GZZ0	328 aa		4.87	□□□□□ -1.63
TRA2A-210	ENST00000497730	UPF3A	Q9H1J1	476 aa	Known RBP	4.87	□□□□□ -1.63
TRA2A-210	ENST00000497730	C10orf88	Q9H8K7	445 aa		4.87	□□□□□ -1.63
TRA2A-210	ENST00000497730	RPF1	Q9H9Y2	349 aa	Known RBP	4.87	□□□□□ -1.63
TRA2A-210	ENST00000497730	PDRG1	Q9NUG6	133 aa		4.87	□□□□□ -1.63
TRA2A-210	ENST00000497730	POMT2	Q9UKY4	750 aa		4.87	□□□□□ -1.63
TRA2A-210	ENST00000497730	NCKAP1	Q9Y2A7	1128 aa		4.87	□□□□□ -1.63
TRA2A-210	ENST00000497730	CTDSPL	O15194	276 aa		4.86	□□□□□ -1.63
TRA2A-210	ENST00000497730	DLAT	P10515	647 aa	Known RBP	4.86	□□□□□ -1.63
TRA2A-210	ENST00000497730	HUNK	P57058	714 aa		4.86	□□□□□ -1.63
TRA2A-210	ENST00000497730	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.86	□□□□□ -1.63
TRA2A-210	ENST00000497730	NECTIN1	Q15223	517 aa		4.86	□□□□□ -1.63
TRA2A-210	ENST00000497730	FASTKD1	Q53R41	847 aa	Known RBP	4.86	□□□□□ -1.63
TRA2A-210	ENST00000497730	KIF6	Q6ZMV9	814 aa		4.86	□□□□□ -1.63
TRA2A-210	ENST00000497730	HOOK3	Q86VS8	718 aa		4.86	□□□□□ -1.63
TRA2A-210	ENST00000497730	OR4D10	Q8NGI6	311 aa		4.86	□□□□□ -1.63
TRA2A-210	ENST00000497730	SGF29	Q96ES7	293 aa		4.86	□□□□□ -1.63
TRA2A-210	ENST00000497730	C18orf12	Q96KH6	178 aa		4.86	□□□□□ -1.63
TRA2A-210	ENST00000497730	NSMCE3	Q96MG7	304 aa		4.86	□□□□□ -1.63
TRA2A-210	ENST00000497730	TSSK2	Q96PF2	358 aa		4.86	□□□□□ -1.63
TRA2A-210	ENST00000497730	IWS1	Q96ST2	819 aa		4.86	□□□□□ -1.63
TRA2A-210	ENST00000497730	PARK7	Q99497	189 aa	Known RBP	4.86	□□□□□ -1.63
TRA2A-210	ENST00000497730	MLPH	Q9BV36	600 aa	Predicted RBP	4.86	□□□□□ -1.63
TRA2A-210	ENST00000497730	LSG1	Q9H089	658 aa	Known RBP	4.86	□□□□□ -1.63
TRA2A-210	ENST00000497730	UBQLN3	Q9H347	655 aa		4.86	□□□□□ -1.63
TRA2A-210	ENST00000497730	MED20	Q9H944	212 aa		4.86	□□□□□ -1.63
TRA2A-210	ENST00000497730	B3GAT2	Q9NPZ5	323 aa		4.86	□□□□□ -1.63
TRA2A-210	ENST00000497730	EXOC1	Q9NV70	894 aa		4.86	□□□□□ -1.63
TRA2A-210	ENST00000497730	TMOD3	Q9NYL9	352 aa		4.86	□□□□□ -1.63
TRA2A-210	ENST00000497730	SEPT10	Q9P0V9	454 aa		4.86	□□□□□ -1.63
TRA2A-210	ENST00000497730	POLK	Q9UBT6	870 aa		4.86	□□□□□ -1.63
TRA2A-210	ENST00000497730	NOCT	Q9UK39	431 aa	Known RBP	4.86	□□□□□ -1.63
TRA2A-210	ENST00000497730	FBXL4	Q9UKA2	621 aa		4.86	□□□□□ -1.63
TRA2A-210	ENST00000497730	HBS1L	Q9Y450	684 aa	Known RBP	4.86	□□□□□ -1.63
TRA2A-210	ENST00000497730	NPHP3	Q7Z494	1330 aa		4.86	□□□□□ -1.63
TRA2A-210	ENST00000497730		H0Y626	953 aa		4.85	□□□□□ -1.63
TRA2A-210	ENST00000497730		H7C423	109 aa		4.85	□□□□□ -1.63
TRA2A-210	ENST00000497730	RTCA	O00442	366 aa	Known RBP	4.85	□□□□□ -1.63
TRA2A-210	ENST00000497730	SLC30A4	O14863	429 aa		4.85	□□□□□ -1.63
TRA2A-210	ENST00000497730	PGRMC2	O15173	223 aa		4.85	□□□□□ -1.63
TRA2A-210	ENST00000497730	SURF4	O15260	269 aa		4.85	□□□□□ -1.63
TRA2A-210	ENST00000497730	KIF5C	O60282	957 aa		4.85	□□□□□ -1.63
TRA2A-210	ENST00000497730	SAP30	O75446	220 aa		4.85	□□□□□ -1.63
TRA2A-210	ENST00000497730	PIK3R1	P27986	724 aa		4.85	□□□□□ -1.63
TRA2A-210	ENST00000497730	CCND3	P30281	292 aa	Predicted RBP	4.85	□□□□□ -1.63
TRA2A-210	ENST00000497730	NPBWR1	P48145	328 aa		4.85	□□□□□ -1.63
TRA2A-210	ENST00000497730	ATP1A1-AS1	Q5TC04	95 aa		4.85	□□□□□ -1.63
TRA2A-210	ENST00000497730	TRIM65	Q6PJ69	517 aa		4.85	□□□□□ -1.63
TRA2A-210	ENST00000497730	DHRS11	Q6UWP2	260 aa		4.85	□□□□□ -1.63
TRA2A-210	ENST00000497730	C5orf24	Q7Z6I8	188 aa		4.85	□□□□□ -1.63
TRA2A-210	ENST00000497730	ZER1	Q7Z7L7	766 aa		4.85	□□□□□ -1.63
TRA2A-210	ENST00000497730	LRRTM1	Q86UE6	522 aa		4.85	□□□□□ -1.63
TRA2A-210	ENST00000497730	KRTAP7-1	Q8IUC3	87 aa		4.85	□□□□□ -1.63
TRA2A-210	ENST00000497730	ATAD1	Q8NBU5	361 aa		4.85	□□□□□ -1.63
TRA2A-210	ENST00000497730	KIAA0895	Q8NCT3	520 aa		4.85	□□□□□ -1.63
TRA2A-210	ENST00000497730	NUP37	Q8NFH4	326 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms