RNA–Protein interactions for RNA: ENST00000496489.5

NCK1-212, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-212ENST00000496489 DDHD1Q8NEL9 900 aa2.48□□□□□ -2.01
NCK1-212ENST00000496489 NCOA7Q8NI08 942 aa2.48□□□□□ -2.01
NCK1-212ENST00000496489 CTCFLQ8NI51 663 aaPredicted RBP2.48□□□□□ -2.01
NCK1-212ENST00000496489 GDAP1Q8TB36 358 aa2.48□□□□□ -2.01
NCK1-212ENST00000496489 SPATA18Q8TC71 538 aa2.48□□□□□ -2.01
NCK1-212ENST00000496489 APOBEC4Q8WW27 367 aaKnown RBP2.48□□□□□ -2.01
NCK1-212ENST00000496489 ZNF606Q8WXB4 792 aa2.48□□□□□ -2.01
NCK1-212ENST00000496489 TMEM190Q8WZ59 177 aa2.48□□□□□ -2.01
NCK1-212ENST00000496489 GMPPAQ96IJ6 420 aaPredicted RBP2.48□□□□□ -2.01
NCK1-212ENST00000496489 RBM41Q96IZ5 413 aaKnown RBP2.48□□□□□ -2.01
NCK1-212ENST00000496489 C10orf90Q96M02 699 aa2.48□□□□□ -2.01
NCK1-212ENST00000496489 GDAP1L1Q96MZ0 367 aa2.48□□□□□ -2.01
NCK1-212ENST00000496489 LPAR4Q99677 370 aa2.48□□□□□ -2.01
NCK1-212ENST00000496489 FUCA2Q9BTY2 467 aa2.48□□□□□ -2.01
NCK1-212ENST00000496489 MLPHQ9BV36 600 aaPredicted RBP2.48□□□□□ -2.01
NCK1-212ENST00000496489 DGCR6LQ9BY27 220 aa2.48□□□□□ -2.01
NCK1-212ENST00000496489 PITPNM3Q9BZ71 974 aa2.48□□□□□ -2.01
NCK1-212ENST00000496489 CHMP4BQ9H444 224 aaKnown RBP2.48□□□□□ -2.01
NCK1-212ENST00000496489 COPS7BQ9H9Q2 264 aaPredicted RBP2.48□□□□□ -2.01
NCK1-212ENST00000496489 RAVER2Q9HCJ3 691 aaKnown RBP2.48□□□□□ -2.01
NCK1-212ENST00000496489 C2orf42Q9NWW7 574 aa2.48□□□□□ -2.01
NCK1-212ENST00000496489 COMMD8Q9NX08 183 aa2.48□□□□□ -2.01
NCK1-212ENST00000496489 SEPT10Q9P0V9 454 aa2.48□□□□□ -2.01
NCK1-212ENST00000496489 CDH7Q9ULB5 785 aa2.48□□□□□ -2.01
NCK1-212ENST00000496489 NSG2Q9Y328 171 aa2.48□□□□□ -2.01
NCK1-212ENST00000496489 PYGO1Q9Y3Y4 419 aa2.48□□□□□ -2.01
NCK1-212ENST00000496489 COLEC10Q9Y6Z7 277 aa2.48□□□□□ -2.01
NCK1-212ENST00000496489 ATAD2BQ9ULI0 1458 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 A0A087WUV0 522 aaPredicted RBP2.47□□□□□ -2.01
NCK1-212ENST00000496489 TRBV4-1A0A0J9YWV2 114 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 MSGN1A6NI15 193 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 SLCO1B7G3V0H7 640 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 H3BMM5 538 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 CTDSPLO15194 276 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 TEX28O15482 410 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 STX6O43752 255 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 APBB3O95704 486 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 CLDN1O95832 211 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 GUCA1CO95843 209 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 ANKRD34CP0C6C1 535 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 CCND3P30281 292 aaPredicted RBP2.47□□□□□ -2.01
NCK1-212ENST00000496489 CDX1P47902 265 aaPredicted RBP2.47□□□□□ -2.01
NCK1-212ENST00000496489 SLC6A12P48065 614 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 NPBWR1P48145 328 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 RGS19P49795 217 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 CRIP2P52943 208 aaPredicted RBP2.47□□□□□ -2.01
NCK1-212ENST00000496489 CLDN17P56750 224 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 GUCY2DQ02846 1103 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 YWHAHQ04917 246 aaPredicted RBP2.47□□□□□ -2.01
NCK1-212ENST00000496489 C17orf67Q0P5P2 114 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 ITGA9Q13797 1035 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 TMEM187Q14656 261 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 SLMAPQ14BN4 828 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 TMEM132DQ14C87 1099 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 SGSM1Q2NKQ1 1148 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 TMEM30BQ3MIR4 351 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 ZFP69Q49AA0 526 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 IQCCQ4KMZ1 466 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 SPOUT1Q5T280 376 aaKnown RBP2.47□□□□□ -2.01
NCK1-212ENST00000496489 ADAMTSL4-AS1Q5T5F5 129 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 PSRC1Q6PGN9 363 aaPredicted RBP2.47□□□□□ -2.01
NCK1-212ENST00000496489 IYDQ6PHW0 289 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 SLC25A47Q6Q0C1 308 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 PRSS55Q6UWB4 352 aaPredicted RBP2.47□□□□□ -2.01
NCK1-212ENST00000496489 LEKR1Q6ZMV7 388 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 FCRLAQ7L513 359 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 ANKRD33Q7Z3H0 272 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 PIWIL3Q7Z3Z3 882 aaKnown RBP2.47□□□□□ -2.01
NCK1-212ENST00000496489 RCOR2Q8IZ40 523 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 SYCP3Q8IZU3 236 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 LSMEM2Q8N112 164 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 GBP7Q8N8V2 638 aaPredicted RBP2.47□□□□□ -2.01
NCK1-212ENST00000496489 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.47□□□□□ -2.01
NCK1-212ENST00000496489 SPC24Q8NBT2 197 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 KIAA0895Q8NCT3 520 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 ZNF540Q8NDQ6 660 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 OR10G8Q8NGN5 311 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 OR6S1Q8NH40 331 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 ARHGAP45Q92619 1136 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 TAF4BQ92750 862 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 ZNF486Q96H40 463 aaPredicted RBP2.47□□□□□ -2.01
NCK1-212ENST00000496489 CABS1Q96KC9 395 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 ART5Q96L15 291 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 PARK7Q99497 189 aaKnown RBP2.47□□□□□ -2.01
NCK1-212ENST00000496489 NKX3-1Q99801 234 aaPredicted RBP2.47□□□□□ -2.01
NCK1-212ENST00000496489 RBM4Q9BWF3 364 aaKnown RBP2.47□□□□□ -2.01
NCK1-212ENST00000496489 CLEC7AQ9BXN2 247 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 BARHL1Q9BZE3 327 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 DNAI2Q9GZS0 605 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 LSG1Q9H089 658 aaKnown RBP2.47□□□□□ -2.01
NCK1-212ENST00000496489 FGF22Q9HCT0 170 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 TUFT1Q9NNX1 390 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 MAN2C1Q9NTJ4 1040 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 PLCXD1Q9NUJ7 323 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 ATAD3AQ9NVI7 634 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 TMOD3Q9NYL9 352 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 CACNG5Q9UF02 275 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 NOCTQ9UK39 431 aaKnown RBP2.47□□□□□ -2.01
NCK1-212ENST00000496489 PPP1R3CQ9UQK1 317 aa2.47□□□□□ -2.01
NCK1-212ENST00000496489 HBS1LQ9Y450 684 aaKnown RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms