RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 PNLIPRP1P54315 467 aa13.67□□□□□ -0.22
CXCL12-208ENST00000496375 IL2P60568 153 aa13.67□□□□□ -0.22
CXCL12-208ENST00000496375 EFTUD2Q15029 972 aaKnown RBP eCLIP13.67□□□□□ -0.22
CXCL12-208ENST00000496375 FAM153CQ494X1 144 aa13.67□□□□□ -0.22
CXCL12-208ENST00000496375 B3GNTL1Q67FW5 361 aaPredicted RBP13.67□□□□□ -0.22
CXCL12-208ENST00000496375 TMEM207Q6UWW9 146 aa13.67□□□□□ -0.22
CXCL12-208ENST00000496375 ISLR2Q6UXK2 745 aa13.67□□□□□ -0.22
CXCL12-208ENST00000496375 PAQR7Q86WK9 346 aa13.67□□□□□ -0.22
CXCL12-208ENST00000496375 CEP97Q8IW35 865 aa13.67□□□□□ -0.22
CXCL12-208ENST00000496375 CTAGE3PQ8IX95 158 aa13.67□□□□□ -0.22
CXCL12-208ENST00000496375 NKAPQ8N5F7 415 aaKnown RBP13.67□□□□□ -0.22
CXCL12-208ENST00000496375 CSNK1A1LQ8N752 337 aa13.67□□□□□ -0.22
CXCL12-208ENST00000496375 GRHL3Q8TE85 626 aa13.67□□□□□ -0.22
CXCL12-208ENST00000496375 SLC44A1Q8WWI5 657 aa13.67□□□□□ -0.22
CXCL12-208ENST00000496375 TSPAN17Q96FV3 270 aa13.67□□□□□ -0.22
CXCL12-208ENST00000496375 PKP4Q99569 1192 aa13.67□□□□□ -0.22
CXCL12-208ENST00000496375 YIPF2Q9BWQ6 316 aa13.67□□□□□ -0.22
CXCL12-208ENST00000496375 EPB41L4BQ9H329 900 aa13.67□□□□□ -0.22
CXCL12-208ENST00000496375 CDC14AQ9UNH5 594 aa13.67□□□□□ -0.22
CXCL12-208ENST00000496375 MTO1Q9Y2Z2 717 aaKnown RBP13.67□□□□□ -0.22
CXCL12-208ENST00000496375 ITPR2Q14571 2701 aa13.67□□□□□ -0.22
CXCL12-208ENST00000496375 SVILO95425 2214 aa13.67□□□□□ -0.22
CXCL12-208ENST00000496375 A0A087WUV0 522 aaPredicted RBP13.66□□□□□ -0.22
CXCL12-208ENST00000496375 NSG1A0A0A6YYJ2 146 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 HMX2A2RU54 273 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 E2F3O00716 465 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 PRPF4O43172 522 aaKnown RBP eCLIP13.66□□□□□ -0.22
CXCL12-208ENST00000496375 RIPK2O43353 540 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 KLHL18O94889 574 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 CCNDBP1O95273 360 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 ACSL3O95573 720 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 EMP2P54851 167 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 EMP3P54852 163 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 PRDX1Q06830 199 aaKnown RBP13.66□□□□□ -0.22
CXCL12-208ENST00000496375 MFAP5Q13361 173 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 DSG2Q14126 1118 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 TLR1Q15399 786 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 HKDC1Q2TB90 917 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 ICE2Q659A1 982 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 ATG9BQ674R7 924 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 ZNF787Q6DD87 383 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 ZNF425Q6IV72 752 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 WDR93Q6P2C0 686 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 MTERF4Q7Z6M4 381 aaKnown RBP13.66□□□□□ -0.22
CXCL12-208ENST00000496375 LAPTM4BQ86VI4 370 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 SPNS2Q8IVW8 549 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 KBTBD2Q8IY47 623 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 MYO1HQ8N1T3 1032 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 PPFIBP2Q8ND30 876 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 CATSPER1Q8NEC5 780 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 ISL2Q96A47 359 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 MVB12AQ96EY5 273 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 MMABQ96EY8 250 aaPredicted RBP13.66□□□□□ -0.22
CXCL12-208ENST00000496375 LINGO1Q96FE5 620 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 LMF1Q96S06 567 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 ABCF3Q9NUQ8 709 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 TRPC4Q9UBN4 977 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 FETUBQ9UGM5 382 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 TAC3Q9UHF0 121 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 ZNF180Q9UJW8 692 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 RUVBL1Q9Y265 456 aaKnown RBP13.66□□□□□ -0.22
CXCL12-208ENST00000496375 ZGRF1Q86YA3 2104 aa13.66□□□□□ -0.22
CXCL12-208ENST00000496375 ZNF839A8K0R7 811 aa13.65□□□□□ -0.22
CXCL12-208ENST00000496375 IDSB3KWA1 339 aa13.65□□□□□ -0.22
CXCL12-208ENST00000496375 ZBTB14O43829 449 aa13.65□□□□□ -0.22
CXCL12-208ENST00000496375 FAM155BO75949 473 aa13.65□□□□□ -0.22
CXCL12-208ENST00000496375 SLC16A8O95907 504 aa13.65□□□□□ -0.22
CXCL12-208ENST00000496375 SYF2O95926 243 aaKnown RBP13.65□□□□□ -0.22
CXCL12-208ENST00000496375 ENO2P09104 434 aaPredicted RBP13.65□□□□□ -0.22
CXCL12-208ENST00000496375 COX6A1P12074 109 aa13.65□□□□□ -0.22
CXCL12-208ENST00000496375 SLC26A3P40879 764 aa13.65□□□□□ -0.22
CXCL12-208ENST00000496375 EEF1A2Q05639 463 aaKnown RBP13.65□□□□□ -0.22
CXCL12-208ENST00000496375 PPP1R3AQ16821 1122 aa13.65□□□□□ -0.22
CXCL12-208ENST00000496375 FAAH2Q6GMR7 532 aa13.65□□□□□ -0.22
CXCL12-208ENST00000496375 UBE2R2Q712K3 238 aaPredicted RBP13.65□□□□□ -0.22
CXCL12-208ENST00000496375 NDUFAF7Q7L592 441 aa13.65□□□□□ -0.22
CXCL12-208ENST00000496375 CCDC91Q7Z6B0 441 aa13.65□□□□□ -0.22
CXCL12-208ENST00000496375 LRRC56Q8IYG6 542 aaPredicted RBP13.65□□□□□ -0.22
CXCL12-208ENST00000496375 CNPY4Q8N129 248 aa13.65□□□□□ -0.22
CXCL12-208ENST00000496375 ZNF480Q8WV37 535 aa13.65□□□□□ -0.22
CXCL12-208ENST00000496375 FAR1Q8WVX9 515 aa13.65□□□□□ -0.22
CXCL12-208ENST00000496375 RERGQ96A58 199 aaPredicted RBP13.65□□□□□ -0.22
CXCL12-208ENST00000496375 UBXN10Q96LJ8 280 aa13.65□□□□□ -0.22
CXCL12-208ENST00000496375 DERL2Q9GZP9 239 aa13.65□□□□□ -0.22
CXCL12-208ENST00000496375 PARVBQ9HBI1 364 aa13.65□□□□□ -0.22
CXCL12-208ENST00000496375 C14orf105Q9NVL8 296 aa13.65□□□□□ -0.22
CXCL12-208ENST00000496375 UTP6Q9NYH9 597 aaKnown RBP13.65□□□□□ -0.22
CXCL12-208ENST00000496375 ADAMTS6Q9UKP5 1117 aa13.65□□□□□ -0.22
CXCL12-208ENST00000496375 DIDO1Q9BTC0 2240 aaKnown RBP13.65□□□□□ -0.22
CXCL12-208ENST00000496375 A0A0A6YYC8 382 aaPredicted RBP13.64□□□□□ -0.23
CXCL12-208ENST00000496375 E7ENX8 843 aa13.64□□□□□ -0.23
CXCL12-208ENST00000496375 I3L1I5 382 aaPredicted RBP13.64□□□□□ -0.23
CXCL12-208ENST00000496375 HAT1O14929 419 aa13.64□□□□□ -0.23
CXCL12-208ENST00000496375 HEXBP07686 556 aa13.64□□□□□ -0.23
CXCL12-208ENST00000496375 ANXA5P08758 320 aa13.64□□□□□ -0.23
CXCL12-208ENST00000496375 PRR35P0CG20 571 aa13.64□□□□□ -0.23
CXCL12-208ENST00000496375 EDN3P14138 238 aa13.64□□□□□ -0.23
CXCL12-208ENST00000496375 EZRP15311 586 aaKnown RBP13.64□□□□□ -0.23
CXCL12-208ENST00000496375 STMN1P16949 149 aa13.64□□□□□ -0.23
CXCL12-208ENST00000496375 CXCR2P25025 360 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms