RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 APOHP02749 345 aaPredicted RBP3.32□□□□□ -1.88
CLK1-214ENST00000496205 CD48P09326 243 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 HMOX1P09601 288 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 UROSP10746 265 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 GP1BBP13224 206 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 EPORP19235 508 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 TYMPP19971 482 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 LHCGRP22888 699 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 CSTF2P33240 577 aaKnown RBP eCLIP3.32□□□□□ -1.88
CLK1-214ENST00000496205 SERPINB6P35237 376 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 SOAT1P35610 550 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 TIMP3P35625 211 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 KHKP50053 298 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 GPC3P51654 580 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 SLC12A3P55017 1021 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 HSD17B7P56937 341 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 HTD2P86397 168 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 CACNG1Q06432 222 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 TRAP1Q12931 704 aaKnown RBP3.32□□□□□ -1.88
CLK1-214ENST00000496205 KBTBD12Q3ZCT8 623 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 ZNF789Q5FWF6 425 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 SLC35D3Q5M8T2 416 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 ETFRF1Q6IPR1 90 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 UGT3A1Q6NUS8 523 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 CASC4Q6P4E1 433 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 MCM10Q7L590 875 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 CPEB2Q7Z5Q1 589 aaKnown RBP3.32□□□□□ -1.88
CLK1-214ENST00000496205 RABEPKQ7Z6M1 372 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 CCDC83Q8IWF9 413 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 PEX5LQ8IYB4 626 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 RYBPQ8N488 228 aaPredicted RBP3.32□□□□□ -1.88
CLK1-214ENST00000496205 METTL27Q8N6F8 245 aaPredicted RBP3.32□□□□□ -1.88
CLK1-214ENST00000496205 MRPL43Q8N983 215 aaKnown RBP3.32□□□□□ -1.88
CLK1-214ENST00000496205 OR2T11Q8NH01 316 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 NCOA7Q8NI08 942 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 FBXO30Q8TB52 745 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 BCL2L2Q92843 193 aaPredicted RBP3.32□□□□□ -1.88
CLK1-214ENST00000496205 EPSTI1Q96J88 318 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 TMEM237Q96Q45 408 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 PANX3Q96QZ0 392 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 ZNF559Q9BR84 538 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 ATG101Q9BSB4 218 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 CDK19Q9BWU1 502 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 OSBPL8Q9BZF1 889 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 SLC39A8Q9C0K1 460 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 MIS12Q9H081 205 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 MMP28Q9H239 520 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 P2RY12Q9H244 342 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 RIMS4Q9H426 269 aaPredicted RBP3.32□□□□□ -1.88
CLK1-214ENST00000496205 MRPL17Q9NRX2 175 aaKnown RBP3.32□□□□□ -1.88
CLK1-214ENST00000496205 COMMD8Q9NX08 183 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 OR6C2Q9NZP2 312 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 AKAP7Q9P0M2 348 aaPredicted RBP3.32□□□□□ -1.88
CLK1-214ENST00000496205 VPS18Q9P253 973 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 PPP2R2CQ9Y2T4 447 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 R4GN57 208 aa3.32□□□□□ -1.88
CLK1-214ENST00000496205 GREB1LQ9C091 1923 aaPredicted RBP3.32□□□□□ -1.88
CLK1-214ENST00000496205 COL2A1P02458 1487 aaPredicted RBP3.31□□□□□ -1.88
CLK1-214ENST00000496205 ATAD2BQ9ULI0 1458 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 ACEP12821 1306 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 SNURFLB1AK76 121 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 KBTBD13C9JR72 458 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 ACSL4O60488 711 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 AKAP3O75969 853 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 ATP1A1P05023 1023 aaKnown RBP3.31□□□□□ -1.88
CLK1-214ENST00000496205 ERVK-10P10266 1014 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 SSTR1P30872 391 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 CDKN1AP38936 164 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 KLC1Q07866 573 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 LRRC74AQ0VAA2 488 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 NPRL3Q12980 569 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 INAQ16352 499 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 GLIPR1L2Q4G1C9 344 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 HSP90AA5PQ58FG0 334 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 XKR6Q5GH73 641 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 CCNYL2Q5T2Q4 361 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 PRAMEF8Q5VWM4 474 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 GALNT17Q6IS24 598 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 KLHL10Q6JEL2 608 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 GDPD4Q6W3E5 623 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 SIGLEC15Q6ZMC9 328 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 MIER3Q7Z3K6 550 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 AMIGO1Q86WK6 493 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 MEX3DQ86XN8 651 aaKnown RBP3.31□□□□□ -1.88
CLK1-214ENST00000496205 KRTAP7-1Q8IUC3 87 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 CNTN4Q8IWV2 1026 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 C4orf19Q8IY42 314 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 KIRREL3Q8IZU9 778 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 STPG4Q8N801 248 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 KIAA0895Q8NCT3 520 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 DENND6BQ8NEG7 585 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 HPSE2Q8WWQ2 592 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 TM9SF4Q92544 642 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 PIK3R3Q92569 461 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 TSACCQ96A04 125 aaPredicted RBP3.31□□□□□ -1.88
CLK1-214ENST00000496205 SYAP1Q96A49 352 aaPredicted RBP3.31□□□□□ -1.88
CLK1-214ENST00000496205 NSL1Q96IY1 281 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 PRAC1Q96KF2 57 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 C4orf45Q96LM5 186 aa3.31□□□□□ -1.88
CLK1-214ENST00000496205 SLC5A7Q9GZV3 580 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms