RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 TMEM102Q8N9M5 508 aaPredicted RBP6.67□□□□□ -1.34
USP39-219ENST00000496047 TRPV3Q8NET8 790 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 OR7G3Q8NG95 312 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 OR8J2Q8NGG1 315 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 OR52E4Q8NGH9 312 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 OR10A6Q8NH74 314 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 HUS1BQ8NHY5 278 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 ASB12Q8WXK4 309 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 FGF14Q92915 247 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 NEIL2Q969S2 332 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 CHFRQ96EP1 664 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 SLC47A1Q96FL8 570 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 APIPQ96GX9 242 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 REXO5Q96IC2 774 aaKnown RBP6.67□□□□□ -1.34
USP39-219ENST00000496047 VPS50Q96JG6 964 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 C12orf66Q96MD2 445 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 RNF145Q96MT1 663 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 TMEM74Q96NL1 305 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 TRAPPC9Q96Q05 1148 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 MTERF1Q99551 399 aaKnown RBP6.67□□□□□ -1.34
USP39-219ENST00000496047 GABRG3Q99928 467 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 DUSP26Q9BV47 211 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 TEX101Q9BY14 249 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 MRPS26Q9BYN8 205 aaKnown RBP6.67□□□□□ -1.34
USP39-219ENST00000496047 PLA2G2FQ9BZM2 168 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 BHLHE41Q9C0J9 482 aaPredicted RBP6.67□□□□□ -1.34
USP39-219ENST00000496047 OR52A5Q9H2C5 316 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 SEMA6AQ9H2E6 1030 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 ACTL8Q9H568 366 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 MAGIXQ9H6Y5 334 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 MVB12BQ9H7P6 319 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 GORASP2Q9H8Y8 452 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 MIEF1Q9NQG6 463 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 SIRT5Q9NXA8 310 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 THEGQ9P2T0 379 aa6.67□□□□□ -1.34
USP39-219ENST00000496047 GOLGA4Q13439 2230 aaKnown RBP6.66□□□□□ -1.34
USP39-219ENST00000496047 TBC1D3DA0A087WVF3 549 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 TBC1D3IA0A087WXS9 549 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 TBC1D3EA0A087X179 549 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 TBC1D3KA0A087X1G2 549 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 TBC1D3FA6NER0 549 aaPredicted RBP6.66□□□□□ -1.34
USP39-219ENST00000496047 PRR23AA6NEV1 266 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 SAC3D1A6NKF1 404 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 PDZK1P1A8MUH7 402 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 TBC1D3LB9A6J9 549 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 K7ESM1 405 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 DFNA5O60443 496 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 TPST1O60507 370 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 GUCY1B2O75343 617 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 SMNDC1O75940 238 aaKnown RBP eCLIP6.66□□□□□ -1.34
USP39-219ENST00000496047 SEMA3DO95025 777 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 LRATO95237 230 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 KLF8O95600 359 aaPredicted RBP6.66□□□□□ -1.34
USP39-219ENST00000496047 CPSF4O95639 269 aaKnown RBP6.66□□□□□ -1.34
USP39-219ENST00000496047 IL2RAP01589 272 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 ALBP02768 609 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 TBC1D3HP0C7X1 549 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 MTHFD1P11586 935 aaKnown RBP6.66□□□□□ -1.34
USP39-219ENST00000496047 CD1EP15812 388 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 IL1RNP18510 177 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 CDH2P19022 906 aaPredicted RBP6.66□□□□□ -1.34
USP39-219ENST00000496047 HRH2P25021 359 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 ACADLP28330 430 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 GALK1P51570 392 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 CCR8P51685 355 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 CLCNKAP51800 687 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 METAP1P53582 386 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 TPD52P55327 224 aaPredicted RBP6.66□□□□□ -1.34
USP39-219ENST00000496047 KIAA1024LP59773 190 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 RPS13P62277 151 aaKnown RBP6.66□□□□□ -1.34
USP39-219ENST00000496047 PLIN5Q00G26 463 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 CTBSQ01459 385 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 TAP2Q03519 686 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 MTAPQ13126 283 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 E2F2Q14209 437 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 KIAA0040Q15053 153 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 TEAD4Q15561 434 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 FXNQ16595 210 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 OCLNQ16625 522 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 HKDC1Q2TB90 917 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 WSCD2Q2TBF2 565 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 METRNLQ641Q3 311 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 TBC1D3GQ6DHY5 549 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 OR4F3Q6IEY1 312 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 TBC1D3CQ6IPX1 549 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 PPP4R4Q6NUP7 873 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 KIAA1324Q6UXG2 1013 aaKnown RBP6.66□□□□□ -1.34
USP39-219ENST00000496047 TMIGD1Q6UXZ0 262 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 GCNT7Q6ZNI0 430 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 SLCO4C1Q6ZQN7 724 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 CHST15Q7LFX5 561 aaPredicted RBP6.66□□□□□ -1.34
USP39-219ENST00000496047 CAMKMTQ7Z624 323 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 AMIGO2Q86SJ2 522 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 SERPINA11Q86U17 422 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 SLC30A8Q8IWU4 369 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 PHACTR4Q8IZ21 702 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 ADGRG5Q8IZF4 528 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 TBC1D3Q8IZP1 549 aaPredicted RBP6.66□□□□□ -1.34
USP39-219ENST00000496047 LINC00528Q8N1L1 170 aa6.66□□□□□ -1.34
USP39-219ENST00000496047 KRTCAP2Q8N6L1 136 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms