RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	UBAP2	Q5T6F2	1119 aa	Known RBP	11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	FAM69B	Q5VUD6	431 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	TMEM214	Q6NUQ4	689 aa	Known RBP	11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	KLC3	Q6P597	504 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	NXPE4	Q6UWF7	544 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	COX15	Q7KZN9	410 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	ASPG	Q86U10	573 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	ISL2	Q96A47	359 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	SEC16B	Q96JE7	1060 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	TSNARE1	Q96NA8	513 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	PAFAH2	Q99487	392 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	AIF1L	Q9BQI0	150 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	TXLNGY	Q9BZA5	131 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	UNK	Q9C0B0	810 aa	Known RBP	11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	PITHD1	Q9GZP4	211 aa	Predicted RBP	11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	SLC25A18	Q9H1K4	315 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	ALG9	Q9H6U8	611 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	ZFP69B	Q9UJL9	534 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	SLC22A7	Q9Y694	548 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	MAU2	Q9Y6X3	613 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	POC1B-GALNT4	F8VUJ3	575 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	PEX12	O00623	359 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	P2RX6	O15547	441 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	RIPK2	O43353	540 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	FOXS1	O43638	330 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	NSA2	O95478	260 aa	Known RBP	11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	UMOD	P07911	640 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	C1GALT1C1L	P0DN25	315 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	COL6A2	P12110	1019 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	FBL	P22087	321 aa	Known RBP	11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	MMP11	P24347	488 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	GSTM2	P28161	218 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	GDF5	P43026	501 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	MAGEA12	P43365	314 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	SCTR	P47872	440 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	CDC16	Q13042	620 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	ATG9B	Q674R7	924 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	NIPAL1	Q6NVV3	410 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	SLCO4C1	Q6ZQN7	724 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	MRGPRE	Q86SM8	312 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	CENPL	Q8N0S6	344 aa	Predicted RBP	11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	ZNF843	Q8N446	348 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	LRRN4CL	Q8ND94	238 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	TRPV3	Q8NET8	790 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	DCAKD	Q8WVC6	231 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	KCTD4	Q8WVF5	259 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	NXNL1	Q96CM4	212 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	MMAB	Q96EY8	250 aa	Predicted RBP	11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	VPS50	Q96JG6	964 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	FER1L6-AS2	Q96M78	137 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	ATOH8	Q96SQ7	321 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	TMEM79	Q9BSE2	394 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	CD244	Q9BZW8	370 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	SEMA4C	Q9C0C4	833 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	TGIF2	Q9GZN2	237 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	ING2	Q9H160	280 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	EHD1	Q9H4M9	534 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	MKKS	Q9NPJ1	570 aa	Predicted RBP	11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	SEMA3G	Q9NS98	782 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	DNAJC11	Q9NVH1	559 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	WWOX	Q9NZC7	414 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	NUDT4	Q9NZJ9	180 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	FETUB	Q9UGM5	382 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	MAP4K5	Q9Y4K4	846 aa		11.75	□□□□□ -0.53
MRPL55-233	ENST00000495899	PIEZO2	Q9H5I5	2752 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899		A0A0A6YYC8	382 aa	Predicted RBP	11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	EXOC1L	A0A1B0GW35	172 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	ARGFX	A6NJG6	315 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899		I3L1I5	382 aa	Predicted RBP	11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	PCDH17	O14917	1159 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	CLGN	O14967	610 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	C1QL1	O75973	258 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	PRB1	P04280	392 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	SNRPA	P09012	282 aa	Known RBP	11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	ZGLP1	P0C6A0	271 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	FAM153B	P0C7A2	387 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	TNFRSF8	P28908	595 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	OTX2	P32243	289 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	SOX11	P35716	441 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	REEP5	Q00765	189 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	MEF2A	Q02078	507 aa	Predicted RBP	11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	PCDH1	Q08174	1060 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	HERC3	Q15034	1050 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	PDK4	Q16654	411 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	C18orf21	Q32NC0	220 aa	Predicted RBP	11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	FAM153C	Q494X1	144 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	TEX35	Q5T0J7	233 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	TCTN3	Q6NUS6	607 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	METTL2B	Q6P1Q9	378 aa	Known RBP	11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	LRRC70	Q7Z2Q7	622 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	TMPRSS11B	Q86T26	416 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	DTWD1	Q8N5C7	304 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	METTL27	Q8N6F8	245 aa	Predicted RBP	11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	AMER3	Q8N944	861 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	ZNF740	Q8NDX6	193 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	TTL	Q8NG68	377 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	C9orf43	Q8TAL5	461 aa	Predicted RBP	11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	NT5C	Q8TCD5	201 aa		11.74	□□□□□ -0.53
MRPL55-233	ENST00000495899	STT3B	Q8TCJ2	826 aa		11.74	□□□□□ -0.53

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