RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 TMEM115Q12893 351 aaPredicted RBP12.98□□□□□ -0.33
GPC1-209ENST00000495100 TCEAL5Q5H9L2 206 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 ZNF513Q8N8E2 541 aaPredicted RBP12.98□□□□□ -0.33
GPC1-209ENST00000495100 ZFP41Q8N8Y5 198 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 KLHL23Q8NBE8 558 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 OR10G2Q8NGC3 310 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 WDR48Q8TAF3 677 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 DNAJA3Q96EY1 480 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 CNPPD1Q9BV87 410 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 TTTY10Q9BZA0 68 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 DCSTAMPQ9H295 470 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 KCNK12Q9HB15 430 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 STOX2Q9P2F5 926 aaPredicted RBP12.98□□□□□ -0.33
GPC1-209ENST00000495100 TAC3Q9UHF0 121 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 SARDHQ9UL12 918 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 LYVE1Q9Y5Y7 322 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 EYSQ5T1H1 3165 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 GSAPA4D1B5 854 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 GABRR3A8MPY1 467 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 AREL1O15033 823 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 PRKRAO75569 313 aaKnown RBP12.98□□□□□ -0.33
GPC1-209ENST00000495100 SOD2P04179 222 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 IDUAP35475 653 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 DAPP51397 102 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 HOXC5Q00444 222 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 ACVR1Q04771 509 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 ABHD18Q0P651 414 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 SKIV2LQ15477 1246 aaKnown RBP12.98□□□□□ -0.33
GPC1-209ENST00000495100 C6orf183Q5T699 404 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 SPRED1Q7Z699 444 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 IQCF1Q8N6M8 205 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 PACRGLQ8N7B6 248 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 SETD9Q8NE22 299 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 NCSTNQ92542 709 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 EMILIN2Q9BXX0 1053 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 BRINP2Q9C0B6 783 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 CNOT11Q9UKZ1 510 aaKnown RBP12.98□□□□□ -0.33
GPC1-209ENST00000495100 GREB1Q4ZG55 1949 aa12.98□□□□□ -0.33
GPC1-209ENST00000495100 SH3PXD2BA1X283 911 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 ERN1O75460 977 aaKnown RBP12.97□□□□□ -0.33
GPC1-209ENST00000495100 SPINT3P49223 89 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 CLCN4P51793 760 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 RAB25P57735 213 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 ZNF829Q3KNS6 432 aaPredicted RBP12.97□□□□□ -0.33
GPC1-209ENST00000495100 OSBPL10Q9BXB5 764 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 DCAF13Q9NV06 445 aaKnown RBP12.97□□□□□ -0.33
GPC1-209ENST00000495100 RPS6KA6Q9UK32 745 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 MYO15AQ9UKN7 3530 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 CNOT3O75175 753 aaKnown RBP12.97□□□□□ -0.33
GPC1-209ENST00000495100 F11P03951 625 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 EPHX1P07099 455 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 HPCAL1P37235 193 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 PSMD8P48556 350 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 B4GALNT1Q00973 533 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 FOXM1Q08050 763 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 TIGD6Q17RP2 521 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 DUOXA1Q1HG43 343 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 SCRN2Q96FV2 425 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 F2RL3Q96RI0 385 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 TM7SF3Q9NS93 570 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 PAK1IP1Q9NWT1 392 aaPredicted RBP12.97□□□□□ -0.33
GPC1-209ENST00000495100 FBXW2Q9UKT8 454 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 A6NL46 340 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 GRM6O15303 877 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 SNX4O95219 450 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 IGLV3-27P01718 113 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 AOAHP28039 575 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 PTPN5P54829 565 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 SEC13P55735 322 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 ASTLQ6HA08 431 aaPredicted RBP12.97□□□□□ -0.33
GPC1-209ENST00000495100 ELMSAN1Q6PJG2 1045 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 B3GNT8Q7Z7M8 397 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 FAM129CQ86XR2 697 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 C11orf65Q8NCR3 313 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 UBASH3BQ8TF42 649 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 ABCG4Q9H172 646 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 P2RY12Q9H244 342 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 OR51E2Q9H255 320 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 SNTG1Q9NSN8 517 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 TVP23BQ9NYZ1 205 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 FNIP2Q9P278 1114 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 TMCC3Q9ULS5 477 aa12.97□□□□□ -0.33
GPC1-209ENST00000495100 TNS1Q9HBL0 1735 aaKnown RBP12.97□□□□□ -0.33
GPC1-209ENST00000495100 RTTNQ86VV8 2226 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 OTOFQ9HC10 1997 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 SLC28A2O43868 658 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 HOXC8P31273 242 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 CCR2P41597 374 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 SUOXP51687 545 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 CSTF3Q12996 717 aaKnown RBP12.96□□□□□ -0.33
GPC1-209ENST00000495100 CLCA4Q14CN2 919 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 EXOC3L2Q2M3D2 409 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 FAM214AQ32MH5 1076 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 DEPDC1Q5TB30 811 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 SLC8B1Q6J4K2 584 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 ERAP2Q6P179 960 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 SPATC1Q76KD6 591 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 PAWRQ96IZ0 340 aaKnown RBP12.96□□□□□ -0.33
GPC1-209ENST00000495100 MBOAT4Q96T53 435 aa12.96□□□□□ -0.33
GPC1-209ENST00000495100 HEBP1Q9NRV9 189 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms