RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 ACER2Q5QJU3 275 aa21.92■■□□□ 1.1
COL27A1-208ENST00000494780 LCTLQ6UWM7 567 aa21.92■■□□□ 1.1
COL27A1-208ENST00000494780 SHISA5Q8N114 240 aa21.92■■□□□ 1.1
COL27A1-208ENST00000494780 C2CD4AQ8NCU7 369 aaPredicted RBP21.92■■□□□ 1.1
COL27A1-208ENST00000494780 GABPB2Q8TAK5 448 aaPredicted RBP21.92■■□□□ 1.1
COL27A1-208ENST00000494780 ZCCHC10Q8TBK6 192 aa21.92■■□□□ 1.1
COL27A1-208ENST00000494780 M1APQ8TC57 530 aa21.92■■□□□ 1.1
COL27A1-208ENST00000494780 SLC13A3Q8WWT9 602 aa21.92■■□□□ 1.1
COL27A1-208ENST00000494780 ITLN2Q8WWU7 325 aaPredicted RBP21.92■■□□□ 1.1
COL27A1-208ENST00000494780 MS4A14Q96JA4 679 aa21.92■■□□□ 1.1
COL27A1-208ENST00000494780 NAP1L3Q99457 506 aaPredicted RBP21.92■■□□□ 1.1
COL27A1-208ENST00000494780 SGPP1Q9BX95 441 aa21.92■■□□□ 1.1
COL27A1-208ENST00000494780 TAS2R13Q9NYV9 303 aa21.92■■□□□ 1.1
COL27A1-208ENST00000494780 SH2B3Q9UQQ2 575 aa21.92■■□□□ 1.1
COL27A1-208ENST00000494780 JRKLQ9Y4A0 524 aa21.92■■□□□ 1.1
COL27A1-208ENST00000494780 SLC22A7Q9Y694 548 aa21.92■■□□□ 1.1
COL27A1-208ENST00000494780 MYO7BQ6PIF6 2116 aa21.91■■□□□ 1.1
COL27A1-208ENST00000494780 SCN2AQ99250 2005 aa21.91■■□□□ 1.1
COL27A1-208ENST00000494780 FEZF1A0PJY2 475 aa21.91■■□□□ 1.1
COL27A1-208ENST00000494780 CCL21O00585 134 aa21.91■■□□□ 1.1
COL27A1-208ENST00000494780 PRF1P14222 555 aa21.91■■□□□ 1.1
COL27A1-208ENST00000494780 IL10P22301 178 aa21.91■■□□□ 1.1
COL27A1-208ENST00000494780 CA7P43166 264 aa21.91■■□□□ 1.1
COL27A1-208ENST00000494780 TIAL1Q01085 375 aaKnown RBP eCLIP21.91■■□□□ 1.1
COL27A1-208ENST00000494780 NAE1Q13564 534 aa21.91■■□□□ 1.1
COL27A1-208ENST00000494780 CAPN13Q6MZZ7 669 aaPredicted RBP21.91■■□□□ 1.1
COL27A1-208ENST00000494780 SLC26A11Q86WA9 606 aa21.91■■□□□ 1.1
COL27A1-208ENST00000494780 PDSS2Q86YH6 399 aa21.91■■□□□ 1.1
COL27A1-208ENST00000494780 PPIL6Q8IXY8 311 aa21.91■■□□□ 1.1
COL27A1-208ENST00000494780 BEST3Q8N1M1 668 aa21.91■■□□□ 1.1
COL27A1-208ENST00000494780 MYO1HQ8N1T3 1032 aa21.91■■□□□ 1.1
COL27A1-208ENST00000494780 KCT2Q8NC54 265 aa21.91■■□□□ 1.1
COL27A1-208ENST00000494780 CCDC120Q96HB5 630 aa21.91■■□□□ 1.1
COL27A1-208ENST00000494780 NDNQ99608 321 aa21.91■■□□□ 1.1
COL27A1-208ENST00000494780 UNKQ9C0B0 810 aaKnown RBP21.91■■□□□ 1.1
COL27A1-208ENST00000494780 ATG10Q9H0Y0 220 aa21.91■■□□□ 1.1
COL27A1-208ENST00000494780 KCNK13Q9HB14 408 aa21.91■■□□□ 1.1
COL27A1-208ENST00000494780 PPP2R2CQ9Y2T4 447 aa21.91■■□□□ 1.1
COL27A1-208ENST00000494780 OR2W5A6NFC9 320 aa21.9■■□□□ 1.1
COL27A1-208ENST00000494780 LCMT2O60294 686 aaKnown RBP21.9■■□□□ 1.1
COL27A1-208ENST00000494780 RDH16O75452 317 aa21.9■■□□□ 1.1
COL27A1-208ENST00000494780 SLC35G6P0C7Q6 338 aa21.9■■□□□ 1.1
COL27A1-208ENST00000494780 PGAM1P18669 254 aa21.9■■□□□ 1.1
COL27A1-208ENST00000494780 MEP1AQ16819 746 aa21.9■■□□□ 1.1
COL27A1-208ENST00000494780 FCRLBQ6BAA4 426 aa21.9■■□□□ 1.1
COL27A1-208ENST00000494780 RPTNQ6XPR3 784 aa21.9■■□□□ 1.1
COL27A1-208ENST00000494780 MBOAT1Q6ZNC8 495 aa21.9■■□□□ 1.1
COL27A1-208ENST00000494780 ZNF808Q8N4W9 903 aaPredicted RBP21.9■■□□□ 1.1
COL27A1-208ENST00000494780 MFSD9Q8NBP5 474 aa21.9■■□□□ 1.1
COL27A1-208ENST00000494780 PLPP5Q8NEB5 264 aa21.9■■□□□ 1.1
COL27A1-208ENST00000494780 GRK7Q8WTQ7 553 aa21.9■■□□□ 1.1
COL27A1-208ENST00000494780 ALKBH8Q96BT7 664 aaKnown RBP21.9■■□□□ 1.1
COL27A1-208ENST00000494780 OR1F2PQ96R84 312 aa21.9■■□□□ 1.1
COL27A1-208ENST00000494780 HAUS8Q9BT25 410 aa21.9■■□□□ 1.1
COL27A1-208ENST00000494780 MMP25Q9NPA2 562 aa21.9■■□□□ 1.1
COL27A1-208ENST00000494780 NAALAD2Q9Y3Q0 740 aa21.9■■□□□ 1.1
COL27A1-208ENST00000494780 TTI1O43156 1089 aa21.89■■□□□ 1.09
COL27A1-208ENST00000494780 HIST1H2AGP0C0S8 130 aaPredicted RBP21.89■■□□□ 1.09
COL27A1-208ENST00000494780 CDH1P12830 882 aa21.89■■□□□ 1.09
COL27A1-208ENST00000494780 NPPBP16860 134 aa21.89■■□□□ 1.09
COL27A1-208ENST00000494780 HIST1H2ADP20671 130 aa21.89■■□□□ 1.09
COL27A1-208ENST00000494780 CCZ1BP86790 482 aa21.89■■□□□ 1.09
COL27A1-208ENST00000494780 CCZ1P86791 482 aaPredicted RBP21.89■■□□□ 1.09
COL27A1-208ENST00000494780 PMP22Q01453 160 aa21.89■■□□□ 1.09
COL27A1-208ENST00000494780 RHAGQ02094 409 aa21.89■■□□□ 1.09
COL27A1-208ENST00000494780 SRSF11Q05519 484 aaKnown RBP21.89■■□□□ 1.09
COL27A1-208ENST00000494780 DHX9Q08211 1270 aaKnown RBP21.89■■□□□ 1.09
COL27A1-208ENST00000494780 TUBA3CQ13748 450 aa21.89■■□□□ 1.09
COL27A1-208ENST00000494780 CRYMQ14894 314 aa21.89■■□□□ 1.09
COL27A1-208ENST00000494780 HERC3Q15034 1050 aa21.89■■□□□ 1.09
COL27A1-208ENST00000494780 NSDHLQ15738 373 aa21.89■■□□□ 1.09
COL27A1-208ENST00000494780 TUBA3EQ6PEY2 450 aa21.89■■□□□ 1.09
COL27A1-208ENST00000494780 PAQR3Q6TCH7 311 aa21.89■■□□□ 1.09
COL27A1-208ENST00000494780 MRGPRGQ86SM5 289 aa21.89■■□□□ 1.09
COL27A1-208ENST00000494780 CRLF3Q8IUI8 442 aa21.89■■□□□ 1.09
COL27A1-208ENST00000494780 MDS2Q8NDY4 140 aa21.89■■□□□ 1.09
COL27A1-208ENST00000494780 HIST1H2AHQ96KK5 128 aa21.89■■□□□ 1.09
COL27A1-208ENST00000494780 HIST1H2AJQ99878 128 aa21.89■■□□□ 1.09
COL27A1-208ENST00000494780 UTP23Q9BRU9 249 aaKnown RBP21.89■■□□□ 1.09
COL27A1-208ENST00000494780 H2AFJQ9BTM1 129 aa21.89■■□□□ 1.09
COL27A1-208ENST00000494780 SARGQ9BW04 601 aa21.89■■□□□ 1.09
COL27A1-208ENST00000494780 PGRMC1O00264 195 aaKnown RBP21.88■■□□□ 1.09
COL27A1-208ENST00000494780 TTC4O95801 387 aa21.88■■□□□ 1.09
COL27A1-208ENST00000494780 FNTAP49354 379 aa21.88■■□□□ 1.09
COL27A1-208ENST00000494780 CASP6P55212 293 aa21.88■■□□□ 1.09
COL27A1-208ENST00000494780 PHKG1Q16816 387 aa21.88■■□□□ 1.09
COL27A1-208ENST00000494780 SFT2D3Q587I9 215 aa21.88■■□□□ 1.09
COL27A1-208ENST00000494780 RNASEH2BQ5TBB1 312 aaKnown RBP21.88■■□□□ 1.09
COL27A1-208ENST00000494780 PAPD4Q6PIY7 484 aaKnown RBP21.88■■□□□ 1.09
COL27A1-208ENST00000494780 BNC2Q6ZN30 1099 aaPredicted RBP21.88■■□□□ 1.09
COL27A1-208ENST00000494780 MCEMP1Q8IX19 187 aa21.88■■□□□ 1.09
COL27A1-208ENST00000494780 ABHD11Q8NFV4 315 aa21.88■■□□□ 1.09
COL27A1-208ENST00000494780 MOCOSQ96EN8 888 aa21.88■■□□□ 1.09
COL27A1-208ENST00000494780 LINGO1Q96FE5 620 aa21.88■■□□□ 1.09
COL27A1-208ENST00000494780 PEX11GQ96HA9 241 aa21.88■■□□□ 1.09
COL27A1-208ENST00000494780 LPAR4Q99677 370 aa21.88■■□□□ 1.09
COL27A1-208ENST00000494780 SCN3AQ9NY46 2000 aa21.87■■□□□ 1.09
COL27A1-208ENST00000494780 MAGEB17A8MXT2 336 aa21.87■■□□□ 1.09
COL27A1-208ENST00000494780 NRDCO43847 1150 aa21.87■■□□□ 1.09
COL27A1-208ENST00000494780 SLC19A2O60779 497 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms