RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 TEKT2Q9UIF3 430 aa11.93□□□□□ -0.5
SKA1-205ENST00000494518 VPS9D1Q9Y2B5 631 aa11.93□□□□□ -0.5
SKA1-205ENST00000494518 ZKSCAN5Q9Y2L8 839 aa11.93□□□□□ -0.5
SKA1-205ENST00000494518 DHRS7Q9Y394 339 aa11.93□□□□□ -0.5
SKA1-205ENST00000494518 DNAJC13O75165 2243 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 MED13LQ71F56 2210 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 INTS1Q8N201 2190 aaKnown RBP11.92□□□□□ -0.5
SKA1-205ENST00000494518 ZCWPW2A0A1B0GU75 182 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 FAM237BA0A1B0GVD1 139 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 H0YIG0 161 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 GFYI3L273 518 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 LCMT2O60294 686 aaKnown RBP11.92□□□□□ -0.5
SKA1-205ENST00000494518 SLC19A2O60779 497 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 HAUS5O94927 633 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 B3GALT4O96024 378 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 SKIV2L2P42285 1042 aaKnown RBP11.92□□□□□ -0.5
SKA1-205ENST00000494518 RPS15AP62244 130 aaKnown RBP11.92□□□□□ -0.5
SKA1-205ENST00000494518 AP2B1P63010 937 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 CSNK1G2P78368 415 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 ADORA2A-AS1P86434 159 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 RBPJQ06330 500 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 TUBA3CQ13748 450 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 SFT2D3Q587I9 215 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 ACER2Q5QJU3 275 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 PLAG1Q6DJT9 500 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 SPINK14Q6IE38 97 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 TMEM214Q6NUQ4 689 aaKnown RBP11.92□□□□□ -0.5
SKA1-205ENST00000494518 TUBA3EQ6PEY2 450 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 SLC26A11Q86WA9 606 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 PDSS2Q86YH6 399 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 AGGF1Q8N302 714 aaeCLIP11.92□□□□□ -0.5
SKA1-205ENST00000494518 ZNF808Q8N4W9 903 aaPredicted RBP11.92□□□□□ -0.5
SKA1-205ENST00000494518 FBXO15Q8NCQ5 510 aaPredicted RBP11.92□□□□□ -0.5
SKA1-205ENST00000494518 OR5T3Q8NGG3 340 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 KCNJ9Q92806 393 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 PEX11GQ96HA9 241 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 ZNF354BQ96LW1 612 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 SERPINB12Q96P63 405 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 ANKHQ9HCJ1 492 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 TMEM184CQ9NVA4 438 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 MAD1L1Q9Y6D9 718 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 ZNF407Q9C0G0 2248 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 HIVEP1P15822 2718 aa11.92□□□□□ -0.5
SKA1-205ENST00000494518 SETD2Q9BYW2 2564 aaPredicted RBP11.91□□□□□ -0.5
SKA1-205ENST00000494518 SDR42E2A6NKP2 422 aa11.91□□□□□ -0.5
SKA1-205ENST00000494518 NPIPA5E9PKD4 350 aa11.91□□□□□ -0.5
SKA1-205ENST00000494518 TTI1O43156 1089 aa11.91□□□□□ -0.5
SKA1-205ENST00000494518 ESRRAP11474 423 aaPredicted RBP11.91□□□□□ -0.5
SKA1-205ENST00000494518 CDH1P12830 882 aa11.91□□□□□ -0.5
SKA1-205ENST00000494518 ENO3P13929 434 aaPredicted RBP11.91□□□□□ -0.5
SKA1-205ENST00000494518 COX6B1P14854 86 aa11.91□□□□□ -0.5
SKA1-205ENST00000494518 OLR1P78380 273 aa11.91□□□□□ -0.5
SKA1-205ENST00000494518 MEF2AQ02078 507 aaPredicted RBP11.91□□□□□ -0.5
SKA1-205ENST00000494518 OC90Q02509 493 aaPredicted RBP11.91□□□□□ -0.5
SKA1-205ENST00000494518 RELAQ04206 551 aa11.91□□□□□ -0.5
SKA1-205ENST00000494518 NAE1Q13564 534 aa11.91□□□□□ -0.5
SKA1-205ENST00000494518 ABRAXAS2Q15018 415 aa11.91□□□□□ -0.5
SKA1-205ENST00000494518 CDSNQ15517 529 aa11.91□□□□□ -0.5
SKA1-205ENST00000494518 OR1C1Q15619 314 aa11.91□□□□□ -0.5
SKA1-205ENST00000494518 HSP90AA5PQ58FG0 334 aa11.91□□□□□ -0.5
SKA1-205ENST00000494518 PAPD4Q6PIY7 484 aaKnown RBP11.91□□□□□ -0.5
SKA1-205ENST00000494518 BNC2Q6ZN30 1099 aaPredicted RBP11.91□□□□□ -0.5
SKA1-205ENST00000494518 GDF7Q7Z4P5 450 aa11.91□□□□□ -0.5
SKA1-205ENST00000494518 ASPGQ86U10 573 aa11.91□□□□□ -0.5
SKA1-205ENST00000494518 C17orf64Q86WR6 236 aa11.91□□□□□ -0.5
SKA1-205ENST00000494518 MCOLN3Q8TDD5 553 aa11.91□□□□□ -0.5
SKA1-205ENST00000494518 MAGED4Q96JG8 741 aa11.91□□□□□ -0.5
SKA1-205ENST00000494518 AARSD1Q9BTE6 412 aaKnown RBP11.91□□□□□ -0.5
SKA1-205ENST00000494518 RUBCNLQ9H714 662 aa11.91□□□□□ -0.5
SKA1-205ENST00000494518 IARS2Q9NSE4 1012 aaKnown RBP11.91□□□□□ -0.5
SKA1-205ENST00000494518 TRMT6Q9UJA5 497 aaKnown RBP11.91□□□□□ -0.5
SKA1-205ENST00000494518 FBXO5Q9UKT4 447 aa11.91□□□□□ -0.5
SKA1-205ENST00000494518 NPIPA1Q9UND3 350 aa11.91□□□□□ -0.5
SKA1-205ENST00000494518 PDE10AQ9Y233 779 aa11.91□□□□□ -0.5
SKA1-205ENST00000494518 NAALAD2Q9Y3Q0 740 aa11.91□□□□□ -0.5
SKA1-205ENST00000494518 KLF2Q9Y5W3 355 aaPredicted RBP11.91□□□□□ -0.5
SKA1-205ENST00000494518 EML6Q6ZMW3 1958 aa11.9□□□□□ -0.5
SKA1-205ENST00000494518 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.9□□□□□ -0.5
SKA1-205ENST00000494518 GABRR3A8MPY1 467 aa11.9□□□□□ -0.5
SKA1-205ENST00000494518 GOLGA6L6A8MZA4 724 aa11.9□□□□□ -0.5
SKA1-205ENST00000494518 C19orf84I3L1E1 186 aa11.9□□□□□ -0.5
SKA1-205ENST00000494518 DNAJB6O75190 326 aa11.9□□□□□ -0.5
SKA1-205ENST00000494518 SERPIND1P05546 499 aa11.9□□□□□ -0.5
SKA1-205ENST00000494518 MYBL2P10244 700 aa11.9□□□□□ -0.5
SKA1-205ENST00000494518 CD96P40200 585 aa11.9□□□□□ -0.5
SKA1-205ENST00000494518 MAGEA6P43360 314 aa11.9□□□□□ -0.5
SKA1-205ENST00000494518 PGGT1BP53609 377 aa11.9□□□□□ -0.5
SKA1-205ENST00000494518 CASP6P55212 293 aa11.9□□□□□ -0.5
SKA1-205ENST00000494518 HSF1Q00613 529 aa11.9□□□□□ -0.5
SKA1-205ENST00000494518 ALDH6A1Q02252 535 aaKnown RBP11.9□□□□□ -0.5
SKA1-205ENST00000494518 ACTN3Q08043 901 aaPredicted RBP11.9□□□□□ -0.5
SKA1-205ENST00000494518 PTK6Q13882 451 aa11.9□□□□□ -0.5
SKA1-205ENST00000494518 NSDHLQ15738 373 aa11.9□□□□□ -0.5
SKA1-205ENST00000494518 MEP1AQ16819 746 aa11.9□□□□□ -0.5
SKA1-205ENST00000494518 ZNF630Q2M218 657 aaPredicted RBP11.9□□□□□ -0.5
SKA1-205ENST00000494518 ZXDCQ2QGD7 858 aaPredicted RBP11.9□□□□□ -0.5
SKA1-205ENST00000494518 RBM20Q5T481 1227 aaKnown RBP11.9□□□□□ -0.5
SKA1-205ENST00000494518 CAPN13Q6MZZ7 669 aaPredicted RBP11.9□□□□□ -0.5
SKA1-205ENST00000494518 AGTRAPQ6RW13 159 aa11.9□□□□□ -0.5
SKA1-205ENST00000494518 RPTNQ6XPR3 784 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms