RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 GGHQ92820 318 aa5.56□□□□□ -1.52
SMC2-205ENST00000493955 RFT1Q96AA3 541 aa5.56□□□□□ -1.52
SMC2-205ENST00000493955 DTD2Q96FN9 168 aa5.56□□□□□ -1.52
SMC2-205ENST00000493955 SPATA13Q96N96 652 aa5.56□□□□□ -1.52
SMC2-205ENST00000493955 CDCA3Q99618 268 aaPredicted RBP5.56□□□□□ -1.52
SMC2-205ENST00000493955 FAM213AQ9BRX8 229 aa5.56□□□□□ -1.52
SMC2-205ENST00000493955 TEX13AQ9BXU3 409 aaPredicted RBP5.56□□□□□ -1.52
SMC2-205ENST00000493955 BICC1Q9H694 974 aaKnown RBP5.56□□□□□ -1.52
SMC2-205ENST00000493955 RPF1Q9H9Y2 349 aaKnown RBP5.56□□□□□ -1.52
SMC2-205ENST00000493955 FAM118AQ9NWS6 357 aa5.56□□□□□ -1.52
SMC2-205ENST00000493955 NINJ2Q9NZG7 142 aa5.56□□□□□ -1.52
SMC2-205ENST00000493955 PIN4Q9Y237 131 aaKnown RBP5.56□□□□□ -1.52
SMC2-205ENST00000493955 DHX29Q7Z478 1369 aaKnown RBP5.55□□□□□ -1.52
SMC2-205ENST00000493955 DENND3A2RUS2 1198 aa5.55□□□□□ -1.52
SMC2-205ENST00000493955 ANTXRLA6NF34 631 aa5.55□□□□□ -1.52
SMC2-205ENST00000493955 SLC4A1P02730 911 aa5.55□□□□□ -1.52
SMC2-205ENST00000493955 ATP1B1P05026 303 aa5.55□□□□□ -1.52
SMC2-205ENST00000493955 YES1P07947 543 aa5.55□□□□□ -1.52
SMC2-205ENST00000493955 FRMD6-AS1P0C7T7 363 aa5.55□□□□□ -1.52
SMC2-205ENST00000493955 FERP16591 822 aa5.55□□□□□ -1.52
SMC2-205ENST00000493955 DCTP40126 519 aa5.55□□□□□ -1.52
SMC2-205ENST00000493955 GALK2Q01415 458 aa5.55□□□□□ -1.52
SMC2-205ENST00000493955 MYL7Q01449 175 aa5.55□□□□□ -1.52
SMC2-205ENST00000493955 TRA2AQ13595 282 aaKnown RBP eCLIP5.55□□□□□ -1.52
SMC2-205ENST00000493955 TSTA3Q13630 321 aaPredicted RBP5.55□□□□□ -1.52
SMC2-205ENST00000493955 ZC2HC1CQ53FD0 456 aaPredicted RBP5.55□□□□□ -1.52
SMC2-205ENST00000493955 XKR6Q5GH73 641 aa5.55□□□□□ -1.52
SMC2-205ENST00000493955 WDR38Q5JTN6 314 aa5.55□□□□□ -1.52
SMC2-205ENST00000493955 SPSB3Q6PJ21 355 aa5.55□□□□□ -1.52
SMC2-205ENST00000493955 B3GLCTQ6Y288 498 aa5.55□□□□□ -1.52
SMC2-205ENST00000493955 OR4C15Q8NGM1 316 aa5.55□□□□□ -1.52
SMC2-205ENST00000493955 KIAA1524Q8TCG1 905 aa5.55□□□□□ -1.52
SMC2-205ENST00000493955 WBP2Q969T9 261 aa5.55□□□□□ -1.52
SMC2-205ENST00000493955 TMEM143Q96AN5 459 aa5.55□□□□□ -1.52
SMC2-205ENST00000493955 LGALS12Q96DT0 336 aa5.55□□□□□ -1.52
SMC2-205ENST00000493955 PKP2Q99959 881 aa5.55□□□□□ -1.52
SMC2-205ENST00000493955 HIPK2Q9H2X6 1198 aa5.55□□□□□ -1.52
SMC2-205ENST00000493955 C5orf66Q9H5L9 145 aa5.55□□□□□ -1.52
SMC2-205ENST00000493955 ZCCHC3Q9NUD5 404 aaKnown RBP5.55□□□□□ -1.52
SMC2-205ENST00000493955 HPF1Q9NWY4 346 aa5.55□□□□□ -1.52
SMC2-205ENST00000493955 TRIM10Q9UDY6 481 aa5.55□□□□□ -1.52
SMC2-205ENST00000493955 IL36AQ9UHA7 158 aa5.55□□□□□ -1.52
SMC2-205ENST00000493955 UBQLN2Q9UHD9 624 aa5.55□□□□□ -1.52
SMC2-205ENST00000493955 KCNJ14Q9UNX9 436 aa5.55□□□□□ -1.52
SMC2-205ENST00000493955 C2orf92A0A1B0GVN3 265 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 FPGTO14772 594 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 SLC22A2O15244 555 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 HSF2BPO75031 334 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 GLRA3O75311 464 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 GRAP2O75791 330 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 REC8O95072 547 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 NTN1O95631 604 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 ATP1A1P05023 1023 aaKnown RBP5.54□□□□□ -1.52
SMC2-205ENST00000493955 AMD1P17707 334 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 UGT1A6P19224 532 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 CALRP27797 417 aaKnown RBP5.54□□□□□ -1.52
SMC2-205ENST00000493955 SRD5A2P31213 254 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 DNA2P51530 1060 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 NR0B1P51843 470 aaKnown RBP5.54□□□□□ -1.52
SMC2-205ENST00000493955 RBM39Q14498 530 aaKnown RBP5.54□□□□□ -1.52
SMC2-205ENST00000493955 ACCSLQ4AC99 568 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 LCN1P1Q5VSP4 162 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 ZNF324BQ6AW86 544 aaPredicted RBP5.54□□□□□ -1.52
SMC2-205ENST00000493955 C9orf139Q6ZV77 190 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 BATF2Q8N1L9 274 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 ANKRD20A12PQ8NF67 263 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 KBTBD8Q8NFY9 601 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 OR7A2PQ8NGA2 310 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 OR52E1Q8NGJ3 308 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 ZBTB9Q96C00 473 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 ALG14Q96F25 216 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 KRT23Q9C075 422 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 XPO4Q9C0E2 1151 aaKnown RBP5.54□□□□□ -1.52
SMC2-205ENST00000493955 TMEM245Q9H330 911 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 EXOC1Q9NV70 894 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 DONSONQ9NYP3 566 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 MIS18AQ9NYP9 233 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 TSPAN16Q9UKR8 245 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 GRID1Q9ULK0 1009 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 TMED7Q9Y3B3 224 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 NPHP3Q7Z494 1330 aa5.54□□□□□ -1.52
SMC2-205ENST00000493955 IGHV4-61A0A0C4DH41 118 aa5.53□□□□□ -1.52
SMC2-205ENST00000493955 TLR4O00206 839 aa5.53□□□□□ -1.52
SMC2-205ENST00000493955 INSIG1O15503 277 aa5.53□□□□□ -1.52
SMC2-205ENST00000493955 CDK2AP2O75956 126 aa5.53□□□□□ -1.52
SMC2-205ENST00000493955 CXCL14O95715 111 aa5.53□□□□□ -1.52
SMC2-205ENST00000493955 GAS8O95995 478 aa5.53□□□□□ -1.52
SMC2-205ENST00000493955 IGHV4-59P01825 116 aa5.53□□□□□ -1.52
SMC2-205ENST00000493955 CCDC192P0DO97 292 aa5.53□□□□□ -1.52
SMC2-205ENST00000493955 RBMS1P29558 406 aaKnown RBP5.53□□□□□ -1.52
SMC2-205ENST00000493955 CEACAM8P31997 349 aaPredicted RBP5.53□□□□□ -1.52
SMC2-205ENST00000493955 CDKN1AP38936 164 aa5.53□□□□□ -1.52
SMC2-205ENST00000493955 RABIFP47224 123 aa5.53□□□□□ -1.52
SMC2-205ENST00000493955 ATXN3P54252 364 aaPredicted RBP5.53□□□□□ -1.52
SMC2-205ENST00000493955 FAM43BQ6ZT52 329 aaPredicted RBP5.53□□□□□ -1.52
SMC2-205ENST00000493955 THEM5Q8N1Q8 247 aa5.53□□□□□ -1.52
SMC2-205ENST00000493955 TMEM99Q8N816 258 aa5.53□□□□□ -1.52
SMC2-205ENST00000493955 GBP7Q8N8V2 638 aaPredicted RBP5.53□□□□□ -1.52
SMC2-205ENST00000493955 LMO3Q8TAP4 145 aa5.53□□□□□ -1.52
SMC2-205ENST00000493955 ULK4Q96C45 1275 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms