RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 FBXO8Q9NRD0 319 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 TXLNGQ9NUQ3 528 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 RIC8BQ9NVN3 520 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 KLHL20Q9Y2M5 609 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 RNF11Q9Y3C5 154 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 TRAF6Q9Y4K3 522 aa14.27□□□□□ -0.13
ACTB-213ENST00000493945 KNTC1P50748 2209 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 ADAMTS20P59510 1910 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 FEZF1A0PJY2 475 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 FOXE1O00358 373 aaPredicted RBP14.26□□□□□ -0.13
ACTB-213ENST00000493945 FFAR3O14843 346 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 GPR42O15529 346 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 RGS14O43566 566 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 SNNO75324 88 aaPredicted RBP14.26□□□□□ -0.13
ACTB-213ENST00000493945 EIF2S1P05198 315 aaKnown RBP14.26□□□□□ -0.13
ACTB-213ENST00000493945 SERPINA6P08185 405 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 TROVE2P10155 538 aaKnown RBP eCLIP14.26□□□□□ -0.13
ACTB-213ENST00000493945 PTX3P26022 381 aaPredicted RBP14.26□□□□□ -0.13
ACTB-213ENST00000493945 BCL6P41182 706 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 RAP1GDS1P52306 607 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 PDX1P52945 283 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 ARFIP1P53367 373 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 VSX2P58304 361 aaPredicted RBP14.26□□□□□ -0.13
ACTB-213ENST00000493945 ERVPABLB-1P60509 514 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 SH3BP2P78314 561 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 C16orf72Q14CZ0 275 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 MUM1Q2TAK8 710 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 DEFB110Q30KQ9 67 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.26□□□□□ -0.13
ACTB-213ENST00000493945 TMEM35AQ53FP2 167 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 TRIM40Q6P9F5 258 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 RNF165Q6ZSG1 346 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 RPS27LQ71UM5 84 aaKnown RBP14.26□□□□□ -0.13
ACTB-213ENST00000493945 TMPRSS9Q7Z410 1059 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 TMEM126BQ8IUX1 230 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 PIWIL2Q8TC59 973 aaKnown RBP14.26□□□□□ -0.13
ACTB-213ENST00000493945 QRFPRQ96P65 431 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 OR2A5Q96R48 311 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 TAAR9Q96RI9 348 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 DDA1Q9BW61 102 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 CCDC134Q9H6E4 229 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 COPS7BQ9H9Q2 264 aaPredicted RBP14.26□□□□□ -0.13
ACTB-213ENST00000493945 SLC39A1Q9NY26 324 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 PSD3Q9NYI0 1048 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 HAO1Q9UJM8 370 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 PILRAQ9UKJ1 303 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 FIS1Q9Y3D6 152 aa14.26□□□□□ -0.13
ACTB-213ENST00000493945 DNAH14Q0VDD8 3507 aa14.25□□□□□ -0.13
ACTB-213ENST00000493945 H0YGG7 62 aa14.25□□□□□ -0.13
ACTB-213ENST00000493945 SLC28A1O00337 649 aa14.25□□□□□ -0.13
ACTB-213ENST00000493945 CTSVO60911 334 aa14.25□□□□□ -0.13
ACTB-213ENST00000493945 VPS4BO75351 444 aa14.25□□□□□ -0.13
ACTB-213ENST00000493945 SEMA3DO95025 777 aa14.25□□□□□ -0.13
ACTB-213ENST00000493945 CHRNGP07510 517 aa14.25□□□□□ -0.13
ACTB-213ENST00000493945 RBMS1P29558 406 aaKnown RBP14.25□□□□□ -0.13
ACTB-213ENST00000493945 TSFMP43897 325 aaKnown RBP14.25□□□□□ -0.13
ACTB-213ENST00000493945 ARF3P61204 181 aaPredicted RBP14.25□□□□□ -0.13
ACTB-213ENST00000493945 CYP4F2P78329 520 aa14.25□□□□□ -0.13
ACTB-213ENST00000493945 MC2RQ01718 297 aa14.25□□□□□ -0.13
ACTB-213ENST00000493945 TARDBPQ13148 414 aaKnown RBP eCLIP14.25□□□□□ -0.13
ACTB-213ENST00000493945 HERC3Q15034 1050 aa14.25□□□□□ -0.13
ACTB-213ENST00000493945 GPR19Q15760 415 aa14.25□□□□□ -0.13
ACTB-213ENST00000493945 ZIC1Q15915 447 aa14.25□□□□□ -0.13
ACTB-213ENST00000493945 C3orf38Q5JPI3 329 aa14.25□□□□□ -0.13
ACTB-213ENST00000493945 KANK2Q63ZY3 851 aa14.25□□□□□ -0.13
ACTB-213ENST00000493945 PAGE2Q7Z2X7 111 aa14.25□□□□□ -0.13
ACTB-213ENST00000493945 DGLUCYQ7Z3D6 616 aa14.25□□□□□ -0.13
ACTB-213ENST00000493945 DDIASQ8IXT1 998 aa14.25□□□□□ -0.13
ACTB-213ENST00000493945 HUS1BQ8NHY5 278 aa14.25□□□□□ -0.13
ACTB-213ENST00000493945 NT5CQ8TCD5 201 aa14.25□□□□□ -0.13
ACTB-213ENST00000493945 GAL3ST3Q96A11 431 aa14.25□□□□□ -0.13
ACTB-213ENST00000493945 NXPE2Q96DL1 559 aa14.25□□□□□ -0.13
ACTB-213ENST00000493945 MVB12AQ96EY5 273 aa14.25□□□□□ -0.13
ACTB-213ENST00000493945 C17orf62Q9BQA9 187 aa14.25□□□□□ -0.13
ACTB-213ENST00000493945 SIDT1Q9NXL6 827 aaKnown RBP14.25□□□□□ -0.13
ACTB-213ENST00000493945 PISDQ9UG56 409 aa14.25□□□□□ -0.13
ACTB-213ENST00000493945 ZNF490Q9ULM2 529 aaPredicted RBP14.25□□□□□ -0.13
ACTB-213ENST00000493945 CDC14AQ9UNH5 594 aa14.25□□□□□ -0.13
ACTB-213ENST00000493945 PCDHGA8Q9Y5G5 932 aa14.25□□□□□ -0.13
ACTB-213ENST00000493945 COL27A1Q8IZC6 1860 aaPredicted RBP14.25□□□□□ -0.13
ACTB-213ENST00000493945 MANBAO00462 879 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 CPNE3O75131 537 aaKnown RBP14.24□□□□□ -0.13
ACTB-213ENST00000493945 MYO1DO94832 1006 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 VIMP08670 466 aaKnown RBP14.24□□□□□ -0.13
ACTB-213ENST00000493945 PIM1P11309 404 aaPredicted RBP14.24□□□□□ -0.13
ACTB-213ENST00000493945 FGF5P12034 268 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 FOLR1P15328 257 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 PCSK2P16519 638 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 CD22P20273 847 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 CD82P27701 267 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 AVPR1BP47901 424 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 MAPK10P53779 464 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 OCRLQ01968 901 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 GUCY1A3Q02108 690 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 CUL3Q13618 768 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 KCNAB1Q14722 419 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 WASHC2DQ5SRD0 308 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 FBXO42Q6P3S6 717 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 FOXR1Q6PIV2 292 aa14.24□□□□□ -0.13
ACTB-213ENST00000493945 PLD3Q8IV08 490 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms