RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	AMFR	Q9UKV5	643 aa		11.22	□□□□□ -0.61
BRCA1-222	ENST00000493919	NUP205	Q92621	2012 aa		11.22	□□□□□ -0.61
BRCA1-222	ENST00000493919	LOC100506127	A0A0U1RQW1	187 aa		11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	CTDSP2	O14595	271 aa		11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	ABCD4	O14678	606 aa		11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	KDELR3	O43731	214 aa		11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	EPO	P01588	193 aa		11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	ACADM	P11310	421 aa		11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	PSKH1	P11801	424 aa		11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	CD46	P15529	392 aa		11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	DDC	P20711	480 aa		11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	ACTR1A	P61163	376 aa		11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	CAMK2G	Q13555	558 aa	Predicted RBP	11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	ZBED5	Q49AG3	693 aa		11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	FAM91A1	Q658Y4	838 aa		11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	TTC27	Q6P3X3	843 aa		11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	ZC3H14	Q6PJT7	736 aa	Known RBP	11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	MFSD7	Q6UXD7	560 aa		11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	LRRTM4	Q86VH4	590 aa		11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	TMPRSS6	Q8IU80	811 aa		11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	STK40	Q8N2I9	435 aa		11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	OR2T3	Q8NH03	318 aa		11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	RLN3	Q8WXF3	142 aa		11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	MCUR1	Q96AQ8	359 aa		11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	ISOC1	Q96CN7	298 aa		11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	FAF2	Q96CS3	445 aa		11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	SIPA1	Q96FS4	1042 aa		11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	MRGPRX1	Q96LB2	322 aa		11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	COPS4	Q9BT78	406 aa		11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	BDH2	Q9BUT1	245 aa		11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	MRPL37	Q9BZE1	423 aa	Known RBP	11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	KCNH6	Q9H252	994 aa		11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	CHMP1A	Q9HD42	196 aa	Predicted RBP	11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	GGT7	Q9UJ14	662 aa		11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	MN1	Q10571	1320 aa	Predicted RBP	11.21	□□□□□ -0.61
BRCA1-222	ENST00000493919	EML5	Q05BV3	1969 aa		11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	ISPD	A4D126	451 aa		11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	C3orf70	A6NLC5	250 aa	Predicted RBP	11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919		J3KR12	359 aa		11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	PLD2	O14939	933 aa		11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	GSC2	O15499	205 aa		11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	UGDH	O60701	494 aa		11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	USP12	O75317	370 aa		11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	TP53	P04637	393 aa	Predicted RBP	11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	FBP1	P09467	338 aa		11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	T-ENOL	P0DO92	83 aa		11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	SAG	P10523	405 aa	Predicted RBP	11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	ALDH4A1	P30038	563 aa		11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	PSMD8	P48556	350 aa		11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	AKR1D1	P51857	326 aa		11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	ZNF91	Q05481	1191 aa		11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	ZFP69	Q49AA0	526 aa		11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	AASDH	Q4L235	1098 aa	Predicted RBP	11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	CAMKMT	Q7Z624	323 aa		11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	NT5DC3	Q86UY8	548 aa		11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	RETREG3	Q86VR2	466 aa		11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	KATNAL2	Q8IYT4	538 aa		11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	RYBP	Q8N488	228 aa	Predicted RBP	11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	PQLC3	Q8N755	202 aa		11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	GLB1L3	Q8NCI6	653 aa	Predicted RBP	11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	GRIN3A	Q8TCU5	1115 aa		11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	RNF157	Q96PX1	679 aa		11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	CHCHD6	Q9BRQ6	235 aa		11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	CADM1	Q9BY67	442 aa	Known RBP	11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	SERINC1	Q9NRX5	453 aa		11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	EBF1	Q9UH73	591 aa		11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	CYP8B1	Q9UNU6	501 aa		11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	WASF2	Q9Y6W5	498 aa		11.21	□□□□□ -0.62
BRCA1-222	ENST00000493919	SHROOM3	Q8TF72	1996 aa		11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919		A0A0X1KG70	313 aa		11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919	LRRC14B	A6NHZ5	514 aa		11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919	CLDN25	C9JDP6	229 aa		11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919	SCAMP1	O15126	338 aa		11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919	B4GAT1	O43505	415 aa		11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919	TRIM3	O75382	744 aa	Predicted RBP	11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919	CIB2	O75838	187 aa		11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919	IPO13	O94829	963 aa	Known RBP	11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919	MFN2	O95140	757 aa		11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919	IL1B	P01584	269 aa		11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919	FGF4	P08620	206 aa		11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919	CKMT2	P17540	419 aa		11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919	RPL35	P42766	123 aa	Known RBP	11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919	CDKN2B	P42772	138 aa		11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919	SLC1A3	P43003	542 aa		11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919	RHOA	P61586	193 aa		11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919	CDH17	Q12864	832 aa		11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919	SLC14A1	Q13336	389 aa		11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919	NFYC	Q13952	458 aa		11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919	ELAVL3	Q14576	367 aa	Known RBP	11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919	POM121L1P	Q3SYA9	428 aa		11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919	C9orf64	Q5T6V5	341 aa		11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919	ZNF776	Q68DI1	518 aa	Predicted RBP	11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919	DHDDS	Q86SQ9	333 aa		11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919	WDR5B	Q86VZ2	330 aa		11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919	C4orf33	Q8N1A6	199 aa		11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919	FAM160A2	Q8N612	972 aa	Predicted RBP	11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919	OR6K2	Q8NGY2	324 aa		11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919	MAGEE2	Q8TD90	523 aa	Predicted RBP	11.2	□□□□□ -0.62
BRCA1-222	ENST00000493919	ACTRT1	Q8TDG2	376 aa		11.2	□□□□□ -0.62

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